RNA–Protein interactions for RNA: ENST00000520866.5

NSMCE2-208, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 2 BASIC

Gene NSMCE2, Length 1,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-208ENST00000520866 CCDC24Q8N4L8 307 aa12.22□□□□□ -0.45
NSMCE2-208ENST00000520866 PRR7Q8TB68 274 aa12.22□□□□□ -0.45
NSMCE2-208ENST00000520866 WNT7AO00755 349 aa12.21□□□□□ -0.45
NSMCE2-208ENST00000520866 ITGAEP38570 1179 aa12.21□□□□□ -0.45
NSMCE2-208ENST00000520866 FOXC1Q12948 553 aa12.21□□□□□ -0.45
NSMCE2-208ENST00000520866 PKDCCQ504Y2 493 aa12.21□□□□□ -0.45
NSMCE2-208ENST00000520866 MYSM1Q5VVJ2 828 aa12.21□□□□□ -0.45
NSMCE2-208ENST00000520866 DDX17Q92841 729 aaKnown RBP12.21□□□□□ -0.45
NSMCE2-208ENST00000520866 ZBTB3Q9H5J0 574 aa12.21□□□□□ -0.45
NSMCE2-208ENST00000520866 COL22A1Q8NFW1 1626 aaPredicted RBP12.21□□□□□ -0.46
NSMCE2-208ENST00000520866 ROBO2Q9HCK4 1378 aa12.2□□□□□ -0.46
NSMCE2-208ENST00000520866 CCNYL3P0C7X3 344 aa12.2□□□□□ -0.46
NSMCE2-208ENST00000520866 WNT7BP56706 349 aa12.2□□□□□ -0.46
NSMCE2-208ENST00000520866 ORAI2Q96SN7 254 aa12.2□□□□□ -0.46
NSMCE2-208ENST00000520866 RSPH6AQ9H0K4 717 aa12.2□□□□□ -0.46
NSMCE2-208ENST00000520866 TOR4AQ9NXH8 423 aa12.2□□□□□ -0.46
NSMCE2-208ENST00000520866 PCDHB15Q9Y5E8 787 aa12.2□□□□□ -0.46
NSMCE2-208ENST00000520866 KIF1BO60333 1816 aa12.2□□□□□ -0.46
NSMCE2-208ENST00000520866 MYOM2P54296 1465 aa12.2□□□□□ -0.46
NSMCE2-208ENST00000520866 CLTCL1P53675 1640 aa12.19□□□□□ -0.46
NSMCE2-208ENST00000520866 CDC42BPGQ6DT37 1551 aa12.19□□□□□ -0.46
NSMCE2-208ENST00000520866 ESCO1Q5FWF5 840 aa12.19□□□□□ -0.46
NSMCE2-208ENST00000520866 HRCP23327 699 aa12.18□□□□□ -0.46
NSMCE2-208ENST00000520866 SF3B2Q13435 895 aaKnown RBP12.18□□□□□ -0.46
NSMCE2-208ENST00000520866 GJD4Q96KN9 370 aaPredicted RBP12.18□□□□□ -0.46
NSMCE2-208ENST00000520866 EVA1BQ9NVM1 165 aa12.17□□□□□ -0.46
NSMCE2-208ENST00000520866 BLMP54132 1417 aaPredicted RBP12.17□□□□□ -0.46
NSMCE2-208ENST00000520866 FAM187AA6NFU0 413 aa12.16□□□□□ -0.46
NSMCE2-208ENST00000520866 CYP4X1Q8N118 509 aa12.16□□□□□ -0.46
NSMCE2-208ENST00000520866 BCL9LQ86UU0 1499 aa12.15□□□□□ -0.46
NSMCE2-208ENST00000520866 ACIN1Q9UKV3 1341 aaKnown RBP12.15□□□□□ -0.46
NSMCE2-208ENST00000520866 CCDC144AA2RUR9 1427 aa12.15□□□□□ -0.46
NSMCE2-208ENST00000520866 TECPR2O15040 1411 aa12.15□□□□□ -0.46
NSMCE2-208ENST00000520866 PTCRAQ6ISU1 281 aaPredicted RBP12.15□□□□□ -0.46
NSMCE2-208ENST00000520866 UNC5CLQ8IV45 518 aa12.15□□□□□ -0.46
NSMCE2-208ENST00000520866 LIMD1Q9UGP4 676 aa12.15□□□□□ -0.46
NSMCE2-208ENST00000520866 ANKRD30BQ9BXX2 1392 aa12.15□□□□□ -0.46
NSMCE2-208ENST00000520866 PXDNQ92626 1479 aa12.14□□□□□ -0.47
NSMCE2-208ENST00000520866 FOXO3O43524 673 aa12.14□□□□□ -0.47
NSMCE2-208ENST00000520866 MYT1Q01538 1121 aa12.14□□□□□ -0.47
NSMCE2-208ENST00000520866 LYPD8Q6UX82 237 aa12.14□□□□□ -0.47
NSMCE2-208ENST00000520866 KDM4CQ9H3R0 1056 aa12.14□□□□□ -0.47
NSMCE2-208ENST00000520866 NAIPQ13075 1403 aa12.13□□□□□ -0.47
NSMCE2-208ENST00000520866 CFAP99D6REC4 459 aa12.13□□□□□ -0.47
NSMCE2-208ENST00000520866 LILRB3O75022 631 aa12.13□□□□□ -0.47
NSMCE2-208ENST00000520866 PSME1Q06323 249 aa12.13□□□□□ -0.47
NSMCE2-208ENST00000520866 KCNH2Q12809 1159 aa12.13□□□□□ -0.47
NSMCE2-208ENST00000520866 SNIP1Q8TAD8 396 aaKnown RBP12.13□□□□□ -0.47
NSMCE2-208ENST00000520866 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.13□□□□□ -0.47
NSMCE2-208ENST00000520866 CLK2P49760 499 aaKnown RBP12.12□□□□□ -0.47
NSMCE2-208ENST00000520866 SKOR1P84550 965 aa12.12□□□□□ -0.47
NSMCE2-208ENST00000520866 DDRGK1Q96HY6 314 aa12.12□□□□□ -0.47
NSMCE2-208ENST00000520866 ABCC11Q96J66 1382 aa12.12□□□□□ -0.47
NSMCE2-208ENST00000520866 SPATA31A3Q5VYP0 1347 aa12.11□□□□□ -0.47
NSMCE2-208ENST00000520866 RRBP1Q9P2E9 1410 aaKnown RBP12.11□□□□□ -0.47
NSMCE2-208ENST00000520866 SLIT2O94813 1529 aa12.11□□□□□ -0.47
NSMCE2-208ENST00000520866 AVPP01185 164 aa12.11□□□□□ -0.47
NSMCE2-208ENST00000520866 RC3H1Q5TC82 1133 aaKnown RBP12.11□□□□□ -0.47
NSMCE2-208ENST00000520866 CABLES1Q8TDN4 633 aa12.11□□□□□ -0.47
NSMCE2-208ENST00000520866 SIRT1Q96EB6 747 aa12.11□□□□□ -0.47
NSMCE2-208ENST00000520866 MRGPRX2Q96LB1 330 aa12.11□□□□□ -0.47
NSMCE2-208ENST00000520866 KIF1AQ12756 1690 aa12.1□□□□□ -0.47
NSMCE2-208ENST00000520866 RALGAPBQ86X10 1494 aa12.1□□□□□ -0.47
NSMCE2-208ENST00000520866 ARHGEF10O15013 1369 aa12.1□□□□□ -0.47
NSMCE2-208ENST00000520866 CRIPAKQ8N1N5 446 aa12.1□□□□□ -0.47
NSMCE2-208ENST00000520866 UNC93B1Q9H1C4 597 aa12.1□□□□□ -0.47
NSMCE2-208ENST00000520866 GPBP1L1Q9HC44 474 aaPredicted RBP12.1□□□□□ -0.47
NSMCE2-208ENST00000520866 MARF1Q9Y4F3 1742 aaKnown RBP12.1□□□□□ -0.47
NSMCE2-208ENST00000520866 TTC24A2A3L6 582 aaPredicted RBP12.09□□□□□ -0.47
NSMCE2-208ENST00000520866 VPS72Q15906 364 aa12.09□□□□□ -0.47
NSMCE2-208ENST00000520866 QPCTQ16769 361 aa12.09□□□□□ -0.47
NSMCE2-208ENST00000520866 PPLO60437 1756 aa12.09□□□□□ -0.47
NSMCE2-208ENST00000520866 CSPP1Q1MSJ5 1256 aa12.08□□□□□ -0.48
NSMCE2-208ENST00000520866 BAG6P46379 1132 aa12.07□□□□□ -0.48
NSMCE2-208ENST00000520866 SKIV2LQ15477 1246 aaKnown RBP12.07□□□□□ -0.48
NSMCE2-208ENST00000520866 SH3D19Q5HYK7 790 aa12.07□□□□□ -0.48
NSMCE2-208ENST00000520866 TNS3Q68CZ2 1445 aa12.07□□□□□ -0.48
NSMCE2-208ENST00000520866 KRT28Q7Z3Y7 464 aa12.07□□□□□ -0.48
NSMCE2-208ENST00000520866 SBNO1A3KN83 1393 aa12.06□□□□□ -0.48
NSMCE2-208ENST00000520866 SRCAPQ6ZRS2 3230 aa12.06□□□□□ -0.48
NSMCE2-208ENST00000520866 F12P00748 615 aaPredicted RBP12.06□□□□□ -0.48
NSMCE2-208ENST00000520866 XPCQ01831 940 aaPredicted RBP12.06□□□□□ -0.48
NSMCE2-208ENST00000520866 CTC1Q2NKJ3 1217 aa12.06□□□□□ -0.48
NSMCE2-208ENST00000520866 KRT27Q7Z3Y8 459 aa12.06□□□□□ -0.48
NSMCE2-208ENST00000520866 SEPT12Q8IYM1 358 aa12.06□□□□□ -0.48
NSMCE2-208ENST00000520866 FAM117AQ9C073 453 aa12.06□□□□□ -0.48
NSMCE2-208ENST00000520866 USP32Q8NFA0 1604 aa12.06□□□□□ -0.48
NSMCE2-208ENST00000520866 KNDC1Q76NI1 1749 aa12.06□□□□□ -0.48
NSMCE2-208ENST00000520866 SMPD1P17405 629 aa12.05□□□□□ -0.48
NSMCE2-208ENST00000520866 SH3BP2P78314 561 aa12.05□□□□□ -0.48
NSMCE2-208ENST00000520866 POLR3EQ9NVU0 708 aa12.05□□□□□ -0.48
NSMCE2-208ENST00000520866 STK26Q9P289 416 aa12.05□□□□□ -0.48
NSMCE2-208ENST00000520866 CCDC9Q9Y3X0 531 aaKnown RBP12.05□□□□□ -0.48
NSMCE2-208ENST00000520866 ADGRF5Q8IZF2 1346 aa12.05□□□□□ -0.48
NSMCE2-208ENST00000520866 EIF3AQ14152 1382 aaKnown RBP12.05□□□□□ -0.48
NSMCE2-208ENST00000520866 PIK3C2GO75747 1445 aa12.04□□□□□ -0.48
NSMCE2-208ENST00000520866 YTHDC2Q9H6S0 1430 aaKnown RBP12.04□□□□□ -0.48
NSMCE2-208ENST00000520866 SMCPP49901 116 aaPredicted RBP12.04□□□□□ -0.48
NSMCE2-208ENST00000520866 WAPLQ7Z5K2 1190 aa12.04□□□□□ -0.48
NSMCE2-208ENST00000520866 HELBQ8NG08 1087 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms