RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 ZNF500O60304 480 aaPredicted RBP20.09■□□□□ 0.81
PCDHGA11-202ENST00000518882 HSPA4P34932 840 aa20.09■□□□□ 0.81
PCDHGA11-202ENST00000518882 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.09■□□□□ 0.81
PCDHGA11-202ENST00000518882 GADD45BO75293 160 aaPredicted RBP20.08■□□□□ 0.81
PCDHGA11-202ENST00000518882 TAF7Q15545 349 aaPredicted RBP20.08■□□□□ 0.81
PCDHGA11-202ENST00000518882 XPCQ01831 940 aaPredicted RBP20.07■□□□□ 0.8
PCDHGA11-202ENST00000518882 PPP1R42Q7Z4L9 355 aa20.07■□□□□ 0.8
PCDHGA11-202ENST00000518882 PI4K2BQ8TCG2 481 aa20.07■□□□□ 0.8
PCDHGA11-202ENST00000518882 HDGFL1Q5TGJ6 251 aa20.07■□□□□ 0.8
PCDHGA11-202ENST00000518882 LTV1Q96GA3 475 aaPredicted RBP20.07■□□□□ 0.8
PCDHGA11-202ENST00000518882 SURF6O75683 361 aaKnown RBP20.06■□□□□ 0.8
PCDHGA11-202ENST00000518882 ZKSCAN5Q9Y2L8 839 aa20.06■□□□□ 0.8
PCDHGA11-202ENST00000518882 POLA2Q14181 598 aa20.06■□□□□ 0.8
PCDHGA11-202ENST00000518882 RPAP1Q9BWH6 1393 aaPredicted RBP20.05■□□□□ 0.8
PCDHGA11-202ENST00000518882 CEBPAP49715 358 aaPredicted RBP20.05■□□□□ 0.8
PCDHGA11-202ENST00000518882 USHBP1Q8N6Y0 703 aa20.05■□□□□ 0.8
PCDHGA11-202ENST00000518882 RHPN1Q8TCX5 695 aa20.05■□□□□ 0.8
PCDHGA11-202ENST00000518882 USP48Q86UV5 1035 aa20.05■□□□□ 0.8
PCDHGA11-202ENST00000518882 PLEKHG5O94827 1062 aa20.04■□□□□ 0.8
PCDHGA11-202ENST00000518882 TSPY26PQ9H489 355 aa20.04■□□□□ 0.8
PCDHGA11-202ENST00000518882 RAD50Q92878 1312 aa20.04■□□□□ 0.8
PCDHGA11-202ENST00000518882 SGSM2O43147 1006 aa20.04■□□□□ 0.8
PCDHGA11-202ENST00000518882 NBPF7P0C2Y1 421 aaPredicted RBP20.04■□□□□ 0.8
PCDHGA11-202ENST00000518882 R3HCC1Q9Y3T6 440 aaKnown RBP20.04■□□□□ 0.8
PCDHGA11-202ENST00000518882 SNX14Q9Y5W7 946 aa20.04■□□□□ 0.8
PCDHGA11-202ENST00000518882 EPB41L2O43491 1005 aaKnown RBP20.03■□□□□ 0.8
PCDHGA11-202ENST00000518882 RAB11FIP3O75154 756 aa20.03■□□□□ 0.8
PCDHGA11-202ENST00000518882 BABAM1Q9NWV8 329 aa20.03■□□□□ 0.8
PCDHGA11-202ENST00000518882 SETD1BQ9UPS6 1966 aaKnown RBP20.03■□□□□ 0.8
PCDHGA11-202ENST00000518882 WDR33Q9C0J8 1336 aaKnown RBP20.03■□□□□ 0.8
PCDHGA11-202ENST00000518882 CRYBG1Q9Y4K1 1723 aa20.03■□□□□ 0.8
PCDHGA11-202ENST00000518882 SRGAP3O43295 1099 aa20.02■□□□□ 0.8
PCDHGA11-202ENST00000518882 RASEFQ8IZ41 740 aa20.02■□□□□ 0.8
PCDHGA11-202ENST00000518882 EID1Q9Y6B2 187 aa20.02■□□□□ 0.8
PCDHGA11-202ENST00000518882 TTC14Q96N46 770 aa20.02■□□□□ 0.8
PCDHGA11-202ENST00000518882 LARP6Q9BRS8 491 aaKnown RBP20.02■□□□□ 0.8
PCDHGA11-202ENST00000518882 LSG1Q9H089 658 aaKnown RBP20.02■□□□□ 0.8
PCDHGA11-202ENST00000518882 EIF2S2P20042 333 aaKnown RBP20.01■□□□□ 0.79
PCDHGA11-202ENST00000518882 CCDC39Q9UFE4 941 aa20.01■□□□□ 0.79
PCDHGA11-202ENST00000518882 USP54Q70EL1 1684 aa20.01■□□□□ 0.79
PCDHGA11-202ENST00000518882 LTN1O94822 1766 aa20.01■□□□□ 0.79
PCDHGA11-202ENST00000518882 TERF1P54274 439 aa20■□□□□ 0.79
PCDHGA11-202ENST00000518882 SYAP1Q96A49 352 aaPredicted RBP20■□□□□ 0.79
PCDHGA11-202ENST00000518882 TBX22Q9Y458 520 aa20■□□□□ 0.79
PCDHGA11-202ENST00000518882 AK2P54819 239 aa20■□□□□ 0.79
PCDHGA11-202ENST00000518882 KIF1BPQ96EK5 621 aa20■□□□□ 0.79
PCDHGA11-202ENST00000518882 KDM3BQ7LBC6 1761 aa20■□□□□ 0.79
PCDHGA11-202ENST00000518882 CEMIPQ8WUJ3 1361 aa19.99■□□□□ 0.79
PCDHGA11-202ENST00000518882 RUFY3Q7L099 469 aa19.99■□□□□ 0.79
PCDHGA11-202ENST00000518882 CHPF2Q9P2E5 772 aa19.99■□□□□ 0.79
PCDHGA11-202ENST00000518882 CNPY2Q9Y2B0 182 aa19.99■□□□□ 0.79
PCDHGA11-202ENST00000518882 SLIT1O75093 1534 aa19.99■□□□□ 0.79
PCDHGA11-202ENST00000518882 MCM5P33992 734 aa19.99■□□□□ 0.79
PCDHGA11-202ENST00000518882 GLIPR1L2Q4G1C9 344 aa19.99■□□□□ 0.79
PCDHGA11-202ENST00000518882 BEND3Q5T5X7 828 aa19.99■□□□□ 0.79
PCDHGA11-202ENST00000518882 CWC27Q6UX04 472 aaKnown RBP19.99■□□□□ 0.79
PCDHGA11-202ENST00000518882 ABTB2Q8N961 1025 aa19.99■□□□□ 0.79
PCDHGA11-202ENST00000518882 SPG7Q9UQ90 795 aa19.99■□□□□ 0.79
PCDHGA11-202ENST00000518882 MED1Q15648 1581 aaPredicted RBP19.99■□□□□ 0.79
PCDHGA11-202ENST00000518882 ARHGAP23Q9P227 1491 aa19.98■□□□□ 0.79
PCDHGA11-202ENST00000518882 PI4KAP2A4QPH2 592 aa19.98■□□□□ 0.79
PCDHGA11-202ENST00000518882 CPA1P15085 419 aa19.98■□□□□ 0.79
PCDHGA11-202ENST00000518882 EIF4A1P60842 406 aaKnown RBP19.98■□□□□ 0.79
PCDHGA11-202ENST00000518882 PI4KAP1Q8N8J0 262 aa19.98■□□□□ 0.79
PCDHGA11-202ENST00000518882 LGR6Q9HBX8 967 aa19.98■□□□□ 0.79
PCDHGA11-202ENST00000518882 ANXA1P04083 346 aa19.97■□□□□ 0.79
PCDHGA11-202ENST00000518882 CNTROBQ8N137 903 aa19.97■□□□□ 0.79
PCDHGA11-202ENST00000518882 TMEM87AQ8NBN3 555 aa19.97■□□□□ 0.79
PCDHGA11-202ENST00000518882 KCNQ3O43525 872 aa19.97■□□□□ 0.79
PCDHGA11-202ENST00000518882 DTNBO60941 627 aa19.96■□□□□ 0.79
PCDHGA11-202ENST00000518882 ZSCAN22P10073 491 aaPredicted RBP19.96■□□□□ 0.79
PCDHGA11-202ENST00000518882 DNAAF4Q8WXU2 420 aa19.96■□□□□ 0.79
PCDHGA11-202ENST00000518882 RGPD2P0DJD1 1756 aa19.96■□□□□ 0.79
PCDHGA11-202ENST00000518882 PHF14O94880 888 aa19.96■□□□□ 0.79
PCDHGA11-202ENST00000518882 LARGE1O95461 756 aa19.96■□□□□ 0.79
PCDHGA11-202ENST00000518882 SYT1P21579 422 aa19.96■□□□□ 0.79
PCDHGA11-202ENST00000518882 RBM10P98175 930 aaKnown RBP19.96■□□□□ 0.79
PCDHGA11-202ENST00000518882 TPRNQ4KMQ1 711 aa19.96■□□□□ 0.79
PCDHGA11-202ENST00000518882 ANKARQ7Z5J8 1434 aa19.95■□□□□ 0.78
PCDHGA11-202ENST00000518882 PLPPR3Q6T4P5 718 aa19.95■□□□□ 0.78
PCDHGA11-202ENST00000518882 LIMCH1Q9UPQ0 1083 aa19.95■□□□□ 0.78
PCDHGA11-202ENST00000518882 PDCL3Q9H2J4 239 aa19.95■□□□□ 0.78
PCDHGA11-202ENST00000518882 ADCY9O60503 1353 aa19.95■□□□□ 0.78
PCDHGA11-202ENST00000518882 STX6O43752 255 aa19.94■□□□□ 0.78
PCDHGA11-202ENST00000518882 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.94■□□□□ 0.78
PCDHGA11-202ENST00000518882 USP42Q9H9J4 1324 aaKnown RBP19.94■□□□□ 0.78
PCDHGA11-202ENST00000518882 CASTP20810 708 aaKnown RBP19.93■□□□□ 0.78
PCDHGA11-202ENST00000518882 PTMAP06454 111 aaKnown RBP19.93■□□□□ 0.78
PCDHGA11-202ENST00000518882 PTH1RQ03431 593 aa19.93■□□□□ 0.78
PCDHGA11-202ENST00000518882 CCDC183Q5T5S1 534 aa19.93■□□□□ 0.78
PCDHGA11-202ENST00000518882 NBPF6Q5VWK0 638 aa19.93■□□□□ 0.78
PCDHGA11-202ENST00000518882 C14orf37Q86TY3 774 aa19.93■□□□□ 0.78
PCDHGA11-202ENST00000518882 NBPF4Q96M43 638 aa19.93■□□□□ 0.78
PCDHGA11-202ENST00000518882 UQCRHLA0A096LP55 91 aa19.92■□□□□ 0.78
PCDHGA11-202ENST00000518882 UQCRHP07919 91 aa19.92■□□□□ 0.78
PCDHGA11-202ENST00000518882 KCNA6P17658 529 aa19.92■□□□□ 0.78
PCDHGA11-202ENST00000518882 CSPP1Q1MSJ5 1256 aa19.92■□□□□ 0.78
PCDHGA11-202ENST00000518882 ADCK5Q3MIX3 580 aa19.92■□□□□ 0.78
PCDHGA11-202ENST00000518882 MPNDQ8N594 471 aa19.92■□□□□ 0.78
PCDHGA11-202ENST00000518882 HYPKQ9NX55 129 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms