RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 ZNF326Q5BKZ1 582 aaKnown RBP7.37□□□□□ -1.23
HMGB1P23-201ENST00000518743 CARD14Q9BXL6 1004 aa7.37□□□□□ -1.23
HMGB1P23-201ENST00000518743 CXXC1Q9P0U4 656 aaPredicted RBP7.37□□□□□ -1.23
HMGB1P23-201ENST00000518743 SYNMO15061 1565 aa7.37□□□□□ -1.23
HMGB1P23-201ENST00000518743 UGGT2Q9NYU1 1516 aa7.37□□□□□ -1.23
HMGB1P23-201ENST00000518743 CNTLNQ9NXG0 1405 aa7.36□□□□□ -1.23
HMGB1P23-201ENST00000518743 SF3B2Q13435 895 aaKnown RBP7.36□□□□□ -1.23
HMGB1P23-201ENST00000518743 ERFEQ4G0M1 354 aa7.36□□□□□ -1.23
HMGB1P23-201ENST00000518743 DNAJC14Q6Y2X3 702 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P23-201ENST00000518743 TAS1R3Q7RTX0 852 aa7.36□□□□□ -1.23
HMGB1P23-201ENST00000518743 IL21Q9HBE4 155 aa7.36□□□□□ -1.23
HMGB1P23-201ENST00000518743 RGS12O14924 1447 aa7.35□□□□□ -1.23
HMGB1P23-201ENST00000518743 IGF1RP08069 1367 aa7.35□□□□□ -1.23
HMGB1P23-201ENST00000518743 JCADQ9P266 1359 aa7.35□□□□□ -1.23
HMGB1P23-201ENST00000518743 GIGYF1O75420 1035 aaPredicted RBP7.35□□□□□ -1.23
HMGB1P23-201ENST00000518743 TRMT44Q8IYL2 757 aaKnown RBP7.35□□□□□ -1.23
HMGB1P23-201ENST00000518743 ZNF511Q8NB15 262 aa7.35□□□□□ -1.23
HMGB1P23-201ENST00000518743 TPCN2Q8NHX9 752 aa7.35□□□□□ -1.23
HMGB1P23-201ENST00000518743 CCDC85AQ96PX6 553 aaPredicted RBP7.35□□□□□ -1.23
HMGB1P23-201ENST00000518743 BCL2L13Q9BXK5 485 aa7.35□□□□□ -1.23
HMGB1P23-201ENST00000518743 PRDM9Q9NQV7 894 aa7.35□□□□□ -1.23
HMGB1P23-201ENST00000518743 PHLPP1O60346 1717 aa7.35□□□□□ -1.23
HMGB1P23-201ENST00000518743 SCAPERQ9BY12 1400 aa7.35□□□□□ -1.23
HMGB1P23-201ENST00000518743 ROBO1Q9Y6N7 1651 aa7.35□□□□□ -1.23
HMGB1P23-201ENST00000518743 NEURL4Q96JN8 1562 aa7.34□□□□□ -1.23
HMGB1P23-201ENST00000518743 CDK13Q14004 1512 aaKnown RBP7.34□□□□□ -1.23
HMGB1P23-201ENST00000518743 ZBTB7BO15156 539 aaPredicted RBP7.34□□□□□ -1.23
HMGB1P23-201ENST00000518743 ITGAEP38570 1179 aa7.34□□□□□ -1.23
HMGB1P23-201ENST00000518743 SERPINB4P48594 390 aa7.34□□□□□ -1.23
HMGB1P23-201ENST00000518743 GLYCTKQ8IVS8 523 aa7.34□□□□□ -1.23
HMGB1P23-201ENST00000518743 ZSCAN29Q8IWY8 852 aaPredicted RBP7.34□□□□□ -1.23
HMGB1P23-201ENST00000518743 COL26A1Q96A83 441 aa7.34□□□□□ -1.23
HMGB1P23-201ENST00000518743 CARMIL1Q5VZK9 1371 aa7.33□□□□□ -1.24
HMGB1P23-201ENST00000518743 ATP10BO94823 1461 aa7.33□□□□□ -1.24
HMGB1P23-201ENST00000518743 ESPNB1AK53 854 aa7.33□□□□□ -1.24
HMGB1P23-201ENST00000518743 PRMT3O60678 531 aa7.33□□□□□ -1.24
HMGB1P23-201ENST00000518743 C1QTNF8P60827 252 aa7.33□□□□□ -1.24
HMGB1P23-201ENST00000518743 COL19A1Q14993 1142 aa7.33□□□□□ -1.24
HMGB1P23-201ENST00000518743 MTRQ99707 1265 aa7.33□□□□□ -1.24
HMGB1P23-201ENST00000518743 HINFPQ9BQA5 517 aa7.33□□□□□ -1.24
HMGB1P23-201ENST00000518743 C1QTNF2Q9BXJ5 285 aa7.33□□□□□ -1.24
HMGB1P23-201ENST00000518743 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.33□□□□□ -1.24
HMGB1P23-201ENST00000518743 PCDHB11Q9Y5F2 797 aa7.33□□□□□ -1.24
HMGB1P23-201ENST00000518743 FAM135BQ49AJ0 1406 aa7.33□□□□□ -1.24
HMGB1P23-201ENST00000518743 STRCP1A6NGW2 1772 aa7.33□□□□□ -1.24
HMGB1P23-201ENST00000518743 CEP350Q5VT06 3117 aa7.32□□□□□ -1.24
HMGB1P23-201ENST00000518743 MROH2AA6NES4 1674 aa7.32□□□□□ -1.24
HMGB1P23-201ENST00000518743 LRP6O75581 1613 aa7.32□□□□□ -1.24
HMGB1P23-201ENST00000518743 C21orf2O43822 256 aa7.32□□□□□ -1.24
HMGB1P23-201ENST00000518743 ICMTO60725 284 aa7.32□□□□□ -1.24
HMGB1P23-201ENST00000518743 DKK1O94907 266 aa7.32□□□□□ -1.24
HMGB1P23-201ENST00000518743 ITGBL1O95965 494 aaPredicted RBP7.32□□□□□ -1.24
HMGB1P23-201ENST00000518743 ABL1P00519 1130 aa7.32□□□□□ -1.24
HMGB1P23-201ENST00000518743 FGD1P98174 961 aa7.32□□□□□ -1.24
HMGB1P23-201ENST00000518743 OCLNQ16625 522 aa7.32□□□□□ -1.24
HMGB1P23-201ENST00000518743 BAP1Q92560 729 aa7.32□□□□□ -1.24
HMGB1P23-201ENST00000518743 SLAIN2Q9P270 581 aa7.32□□□□□ -1.24
HMGB1P23-201ENST00000518743 PCDHGA11Q9Y5H2 935 aa7.32□□□□□ -1.24
HMGB1P23-201ENST00000518743 H3BRB1 525 aa7.31□□□□□ -1.24
HMGB1P23-201ENST00000518743 BACH1O14867 736 aa7.31□□□□□ -1.24
HMGB1P23-201ENST00000518743 ZBTB24O43167 697 aaPredicted RBP7.31□□□□□ -1.24
HMGB1P23-201ENST00000518743 PTCRAQ6ISU1 281 aaPredicted RBP7.31□□□□□ -1.24
HMGB1P23-201ENST00000518743 KIF27Q86VH2 1401 aa7.31□□□□□ -1.24
HMGB1P23-201ENST00000518743 ANKLE2Q86XL3 938 aa7.31□□□□□ -1.24
HMGB1P23-201ENST00000518743 GAS2L2Q8NHY3 880 aa7.31□□□□□ -1.24
HMGB1P23-201ENST00000518743 TUT1Q9H6E5 874 aaKnown RBP7.31□□□□□ -1.24
HMGB1P23-201ENST00000518743 MAP4K5Q9Y4K4 846 aa7.31□□□□□ -1.24
HMGB1P23-201ENST00000518743 AGLP35573 1532 aa7.31□□□□□ -1.24
HMGB1P23-201ENST00000518743 ZMYM3Q14202 1370 aa7.31□□□□□ -1.24
HMGB1P23-201ENST00000518743 GOLGA3Q08378 1498 aa7.3□□□□□ -1.24
HMGB1P23-201ENST00000518743 ANKRD33BA6NCL7 494 aa7.3□□□□□ -1.24
HMGB1P23-201ENST00000518743 FOXO3O43524 673 aa7.3□□□□□ -1.24
HMGB1P23-201ENST00000518743 TLL1O43897 1013 aa7.3□□□□□ -1.24
HMGB1P23-201ENST00000518743 FKBP4Q02790 459 aaKnown RBP eCLIP7.3□□□□□ -1.24
HMGB1P23-201ENST00000518743 KCNC4Q03721 635 aa7.3□□□□□ -1.24
HMGB1P23-201ENST00000518743 MRRFQ96E11 262 aaKnown RBP7.3□□□□□ -1.24
HMGB1P23-201ENST00000518743 DCTN4Q9UJW0 460 aa7.3□□□□□ -1.24
HMGB1P23-201ENST00000518743 KIAA1024Q9UPX6 916 aa7.3□□□□□ -1.24
HMGB1P23-201ENST00000518743 DNMT1P26358 1616 aaKnown RBP7.3□□□□□ -1.24
HMGB1P23-201ENST00000518743 AFF2P51816 1311 aa7.29□□□□□ -1.24
HMGB1P23-201ENST00000518743 SPATA31A6Q5VVP1 1343 aa7.29□□□□□ -1.24
HMGB1P23-201ENST00000518743 KDM5CP41229 1560 aa7.29□□□□□ -1.24
HMGB1P23-201ENST00000518743 DIP2CQ9Y2E4 1556 aa7.29□□□□□ -1.24
HMGB1P23-201ENST00000518743 NPHP4O75161 1426 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P23-201ENST00000518743 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.29□□□□□ -1.24
HMGB1P23-201ENST00000518743 SFI1A8K8P3 1242 aa7.29□□□□□ -1.24
HMGB1P23-201ENST00000518743 ZNF16P17020 682 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P23-201ENST00000518743 VAMP1P23763 118 aa7.29□□□□□ -1.24
HMGB1P23-201ENST00000518743 VARSP26640 1264 aaKnown RBP7.29□□□□□ -1.24
HMGB1P23-201ENST00000518743 WEE1P30291 646 aa7.29□□□□□ -1.24
HMGB1P23-201ENST00000518743 RBM6P78332 1123 aaKnown RBP7.29□□□□□ -1.24
HMGB1P23-201ENST00000518743 DHX9Q08211 1270 aaKnown RBP7.29□□□□□ -1.24
HMGB1P23-201ENST00000518743 TSGA10IPQ3SY00 556 aa7.29□□□□□ -1.24
HMGB1P23-201ENST00000518743 TJAP1Q5JTD0 557 aa7.29□□□□□ -1.24
HMGB1P23-201ENST00000518743 NHSL1Q5SYE7 1610 aa7.29□□□□□ -1.24
HMGB1P23-201ENST00000518743 EP400Q96L91 3159 aa7.29□□□□□ -1.24
HMGB1P23-201ENST00000518743 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.29□□□□□ -1.24
HMGB1P23-201ENST00000518743 A2ML1A8K2U0 1454 aa7.29□□□□□ -1.24
HMGB1P23-201ENST00000518743 IQGAP1P46940 1657 aa7.28□□□□□ -1.24
HMGB1P23-201ENST00000518743 CLTCQ00610 1675 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms