RNA–Protein interactions for RNA: ENST00000516816.1

RNU1-40P-201, Transcript of RNA, U1 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU1-40P, Length 164 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-40P-201ENST00000516816 SYNE3Q6ZMZ3 975 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 THEMISQ8N1K5 641 aaPredicted RBP2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 C8orf58Q8NAV2 365 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 KCNH5Q8NCM2 988 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 TMX3Q96JJ7 454 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 FEZ1Q99689 392 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 ESYT1Q9BSJ8 1104 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 GTPBP4Q9BZE4 634 aaKnown RBP2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 TM6SF1Q9BZW5 370 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 TRIM5Q9C035 493 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 TNMDQ9H2S6 317 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 RRAGDQ9NQL2 400 aaPredicted RBP2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 PDRG1Q9NUG6 133 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 ARGLU1Q9NWB6 273 aaPredicted RBP2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 HMG20BQ9P0W2 317 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 DBF4Q9UBU7 674 aaPredicted RBP2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 STAP2Q9UGK3 403 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 EFCAB6Q5THR3 1501 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 A0A1W2PP64 1363 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 PNPLA6Q8IY17 1366 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 ABCA6Q8N139 1617 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 PIK3R4Q99570 1358 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 NEO1Q92859 1461 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 NRXN1Q9ULB1 1477 aa2.45□□□□□ -2.02
RNU1-40P-201ENST00000516816 ABCC4O15439 1325 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 EDC4Q6P2E9 1401 aaKnown RBP2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 YTHDC2Q9H6S0 1430 aaKnown RBP2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 KIDINS220Q9ULH0 1771 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 UQCRHLA0A096LP55 91 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 PLEKHG3A1L390 1219 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 CCDC66A2RUB6 948 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 G3V3G9 751 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 SRGAP3O43295 1099 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 ALDH1L1O75891 902 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 CLSTN1O94985 981 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 RAPGEF3O95398 923 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 ADCY5O95622 1261 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 BRD1O95696 1058 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 UQCRHP07919 91 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 EIF2S2P20042 333 aaKnown RBP2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 CHMLP26374 656 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 HSPA4P34932 840 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 DDIT3P35638 169 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 PSME1Q06323 249 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 CUL4AQ13619 759 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 GNL2Q13823 731 aaKnown RBP2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 MAP3K11Q16584 847 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 TPD52L1Q16890 204 aaPredicted RBP2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 HDGFL1Q5TGJ6 251 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 VPS53Q5VIR6 699 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 CEP85Q6P2H3 762 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 LARP1Q6PKG0 1096 aaKnown RBP2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 CPLX2Q6PUV4 134 aaKnown RBP2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 BLOC1S2Q6QNY1 142 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 CCDC73Q6ZRK6 1079 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 RUFY3Q7L099 469 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 WAPLQ7Z5K2 1190 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 USP48Q86UV5 1035 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 TXNDC2Q86VQ3 553 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 SMAP1Q8IYB5 467 aaPredicted RBP2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 C16orf71Q8IYS4 520 aaPredicted RBP2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 ABTB2Q8N961 1025 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 JMYQ8N9B5 988 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 CCDC112Q8NEF3 446 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 RHPN1Q8TCX5 695 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 PHACTR3Q96KR7 559 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 SPATA32Q96LK8 384 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 NOL10Q9BSC4 688 aaKnown RBP2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 ALDH8A1Q9H2A2 487 aaPredicted RBP2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 C1orf115Q9H7X2 142 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 ECHDC1Q9NTX5 307 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 DDX19AQ9NUU7 478 aaKnown RBP2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 HYPKQ9NX55 129 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 CGNQ9P2M7 1197 aaKnown RBP2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 CTNNA3Q9UI47 895 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 ITSN1Q15811 1721 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 ARHGEF28Q8N1W1 1705 aaKnown RBP2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 RTL1A6NKG5 1358 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 ATP7BP35670 1465 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 VWDEQ8N2E2 1590 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 UGGT1Q9NYU2 1555 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 HECW2Q9P2P5 1572 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 INO80Q9ULG1 1556 aaPredicted RBP2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 SHPRHQ149N8 1683 aa2.44□□□□□ -2.02
RNU1-40P-201ENST00000516816 TSPOAP1O95153 1857 aa2.43□□□□□ -2.02
RNU1-40P-201ENST00000516816 CPSF1Q10570 1443 aaKnown RBP2.43□□□□□ -2.02
RNU1-40P-201ENST00000516816 NPATQ14207 1427 aa2.43□□□□□ -2.02
RNU1-40P-201ENST00000516816 FAM135BQ49AJ0 1406 aa2.43□□□□□ -2.02
RNU1-40P-201ENST00000516816 YEATS2Q9ULM3 1422 aa2.43□□□□□ -2.02
RNU1-40P-201ENST00000516816 ZFYVE16Q7Z3T8 1539 aa2.43□□□□□ -2.02
RNU1-40P-201ENST00000516816 CAMSAP1Q5T5Y3 1602 aa2.43□□□□□ -2.02
RNU1-40P-201ENST00000516816 SPDYE16A6NNV3 312 aaPredicted RBP2.43□□□□□ -2.02
RNU1-40P-201ENST00000516816 BTBD11A6QL63 1104 aa2.43□□□□□ -2.02
RNU1-40P-201ENST00000516816 CBFA2T2O43439 604 aa2.43□□□□□ -2.02
RNU1-40P-201ENST00000516816 SMARCA5O60264 1052 aaPredicted RBP2.43□□□□□ -2.02
RNU1-40P-201ENST00000516816 KINO60870 393 aaKnown RBP2.43□□□□□ -2.02
RNU1-40P-201ENST00000516816 KIF20AO95235 890 aa2.43□□□□□ -2.02
RNU1-40P-201ENST00000516816 F13A1P00488 732 aa2.43□□□□□ -2.02
RNU1-40P-201ENST00000516816 CASTP20810 708 aaKnown RBP2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms