RNA–Protein interactions for RNA: ENST00000516503.1

RN7SKP21-201, Transcript of RNA, 7SK small nuclear pseudogene 21, humanhuman

BASIC

Gene RN7SKP21, Length 220 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP21-201ENST00000516503 TMF1P82094 1093 aa6.34□□□□□ -1.39
RN7SKP21-201ENST00000516503 HABP4Q5JVS0 413 aaKnown RBP6.34□□□□□ -1.39
RN7SKP21-201ENST00000516503 STAC3Q96MF2 364 aa6.34□□□□□ -1.39
RN7SKP21-201ENST00000516503 LOC102724428A0A0B4J2F2 783 aa6.33□□□□□ -1.4
RN7SKP21-201ENST00000516503 GNPATO15228 680 aa6.33□□□□□ -1.4
RN7SKP21-201ENST00000516503 FXR1P51114 621 aaKnown RBP eCLIP6.33□□□□□ -1.4
RN7SKP21-201ENST00000516503 SIK1P57059 783 aa6.33□□□□□ -1.4
RN7SKP21-201ENST00000516503 DDR1Q08345 913 aa6.33□□□□□ -1.4
RN7SKP21-201ENST00000516503 LDHDQ86WU2 507 aa6.33□□□□□ -1.4
RN7SKP21-201ENST00000516503 PIGBQ92521 554 aa6.33□□□□□ -1.4
RN7SKP21-201ENST00000516503 IP6K1Q92551 441 aa6.33□□□□□ -1.4
RN7SKP21-201ENST00000516503 SMARCC1Q92922 1105 aaPredicted RBP6.33□□□□□ -1.4
RN7SKP21-201ENST00000516503 AFDNP55196 1824 aaKnown RBP6.33□□□□□ -1.4
RN7SKP21-201ENST00000516503 CD163L1Q9NR16 1453 aa6.33□□□□□ -1.4
RN7SKP21-201ENST00000516503 KDRP35968 1356 aa6.32□□□□□ -1.4
RN7SKP21-201ENST00000516503 SOX10P56693 466 aa6.32□□□□□ -1.4
RN7SKP21-201ENST00000516503 MPRIPQ6WCQ1 1025 aa6.32□□□□□ -1.4
RN7SKP21-201ENST00000516503 DCAF11Q8TEB1 546 aa6.32□□□□□ -1.4
RN7SKP21-201ENST00000516503 ARHGEF1Q92888 912 aaKnown RBP6.32□□□□□ -1.4
RN7SKP21-201ENST00000516503 GCC1Q96CN9 775 aa6.32□□□□□ -1.4
RN7SKP21-201ENST00000516503 L3MBTL3Q96JM7 780 aaPredicted RBP6.32□□□□□ -1.4
RN7SKP21-201ENST00000516503 CFAP44Q96MT7 982 aa6.32□□□□□ -1.4
RN7SKP21-201ENST00000516503 TAF1DQ9H5J8 278 aaPredicted RBP6.32□□□□□ -1.4
RN7SKP21-201ENST00000516503 TSKSQ9UJT2 592 aa6.32□□□□□ -1.4
RN7SKP21-201ENST00000516503 COL6A3P12111 3177 aa6.32□□□□□ -1.4
RN7SKP21-201ENST00000516503 A0A0C4DFX4 3053 aa6.31□□□□□ -1.4
RN7SKP21-201ENST00000516503 SBNO2Q9Y2G9 1366 aa6.31□□□□□ -1.4
RN7SKP21-201ENST00000516503 CGNL1Q0VF96 1302 aa6.31□□□□□ -1.4
RN7SKP21-201ENST00000516503 DLL1O00548 723 aa6.31□□□□□ -1.4
RN7SKP21-201ENST00000516503 CYP27B1O15528 508 aa6.31□□□□□ -1.4
RN7SKP21-201ENST00000516503 DDNO94850 711 aaPredicted RBP6.31□□□□□ -1.4
RN7SKP21-201ENST00000516503 MKRN4PQ13434 485 aaPredicted RBP6.31□□□□□ -1.4
RN7SKP21-201ENST00000516503 DGKZQ13574 1117 aa6.31□□□□□ -1.4
RN7SKP21-201ENST00000516503 DPY19L2Q6NUT2 758 aa6.31□□□□□ -1.4
RN7SKP21-201ENST00000516503 SLC4A9Q96Q91 983 aa6.31□□□□□ -1.4
RN7SKP21-201ENST00000516503 KDM2AQ9Y2K7 1162 aa6.31□□□□□ -1.4
RN7SKP21-201ENST00000516503 PARP3Q9Y6F1 533 aa6.31□□□□□ -1.4
RN7SKP21-201ENST00000516503 TRPM7Q96QT4 1865 aa6.3□□□□□ -1.4
RN7SKP21-201ENST00000516503 MAP3K19Q56UN5 1328 aa6.3□□□□□ -1.4
RN7SKP21-201ENST00000516503 CENPJQ9HC77 1338 aaPredicted RBP6.3□□□□□ -1.4
RN7SKP21-201ENST00000516503 POTEFA5A3E0 1075 aa6.3□□□□□ -1.4
RN7SKP21-201ENST00000516503 TM4SF1P30408 202 aa6.3□□□□□ -1.4
RN7SKP21-201ENST00000516503 NKX1-1Q15270 411 aaPredicted RBP6.3□□□□□ -1.4
RN7SKP21-201ENST00000516503 TRAPPC3LQ5T215 181 aa6.3□□□□□ -1.4
RN7SKP21-201ENST00000516503 NME9Q86XW9 330 aa6.3□□□□□ -1.4
RN7SKP21-201ENST00000516503 CAPNS2Q96L46 248 aa6.3□□□□□ -1.4
RN7SKP21-201ENST00000516503 INSRP06213 1382 aa6.3□□□□□ -1.4
RN7SKP21-201ENST00000516503 KTN1Q86UP2 1357 aaKnown RBP6.3□□□□□ -1.4
RN7SKP21-201ENST00000516503 POLRMTO00411 1230 aaKnown RBP6.29□□□□□ -1.4
RN7SKP21-201ENST00000516503 MAP2K2P36507 400 aa6.29□□□□□ -1.4
RN7SKP21-201ENST00000516503 FKBP8Q14318 412 aa6.29□□□□□ -1.4
RN7SKP21-201ENST00000516503 NBPF1Q3BBV0 1214 aa6.29□□□□□ -1.4
RN7SKP21-201ENST00000516503 RC3H1Q5TC82 1133 aaKnown RBP6.29□□□□□ -1.4
RN7SKP21-201ENST00000516503 NBPF6Q5VWK0 638 aa6.29□□□□□ -1.4
RN7SKP21-201ENST00000516503 SMG6Q86US8 1419 aaKnown RBP6.29□□□□□ -1.4
RN7SKP21-201ENST00000516503 ANKRD31Q8N7Z5 1873 aa6.29□□□□□ -1.4
RN7SKP21-201ENST00000516503 NBPF4Q96M43 638 aa6.29□□□□□ -1.4
RN7SKP21-201ENST00000516503 GPR101Q96P66 508 aaPredicted RBP6.29□□□□□ -1.4
RN7SKP21-201ENST00000516503 PCDH11XQ9BZA7 1347 aa6.28□□□□□ -1.4
RN7SKP21-201ENST00000516503 PCDH11YQ9BZA8 1340 aa6.28□□□□□ -1.4
RN7SKP21-201ENST00000516503 CNTNAP4Q9C0A0 1308 aa6.28□□□□□ -1.4
RN7SKP21-201ENST00000516503 LTBP3Q9NS15 1303 aa6.28□□□□□ -1.4
RN7SKP21-201ENST00000516503 CA12O43570 354 aa6.28□□□□□ -1.4
RN7SKP21-201ENST00000516503 RPS6KA4O75676 772 aa6.28□□□□□ -1.4
RN7SKP21-201ENST00000516503 HOXC9P31274 260 aa6.28□□□□□ -1.4
RN7SKP21-201ENST00000516503 ATP6V1AP38606 617 aa6.28□□□□□ -1.4
RN7SKP21-201ENST00000516503 CYP4F22Q6NT55 531 aa6.28□□□□□ -1.4
RN7SKP21-201ENST00000516503 CNTROBQ8N137 903 aa6.28□□□□□ -1.4
RN7SKP21-201ENST00000516503 MS4A3Q96HJ5 214 aa6.28□□□□□ -1.4
RN7SKP21-201ENST00000516503 ASAP1Q9ULH1 1129 aa6.28□□□□□ -1.4
RN7SKP21-201ENST00000516503 RTCBQ9Y3I0 505 aaKnown RBP6.28□□□□□ -1.4
RN7SKP21-201ENST00000516503 COL11A2P13942 1736 aaPredicted RBP6.28□□□□□ -1.4
RN7SKP21-201ENST00000516503 PITPNM2Q9BZ72 1349 aa6.27□□□□□ -1.41
RN7SKP21-201ENST00000516503 USP42Q9H9J4 1324 aaKnown RBP6.27□□□□□ -1.41
RN7SKP21-201ENST00000516503 BRCA2P51587 3418 aa6.27□□□□□ -1.41
RN7SKP21-201ENST00000516503 NCAPD2Q15021 1401 aa6.27□□□□□ -1.41
RN7SKP21-201ENST00000516503 IQCA1LA6NCM1 817 aa6.27□□□□□ -1.41
RN7SKP21-201ENST00000516503 AOC2O75106 756 aa6.27□□□□□ -1.41
RN7SKP21-201ENST00000516503 ECE1P42892 770 aa6.27□□□□□ -1.41
RN7SKP21-201ENST00000516503 FMR1Q06787 632 aaKnown RBP eCLIP6.27□□□□□ -1.41
RN7SKP21-201ENST00000516503 ERFEQ4G0M1 354 aa6.27□□□□□ -1.41
RN7SKP21-201ENST00000516503 CST9Q5W186 159 aa6.27□□□□□ -1.41
RN7SKP21-201ENST00000516503 LTV1Q96GA3 475 aaPredicted RBP6.27□□□□□ -1.41
RN7SKP21-201ENST00000516503 TMEM121BQ9BXQ6 578 aaPredicted RBP6.27□□□□□ -1.41
RN7SKP21-201ENST00000516503 DDX21Q9NR30 783 aaKnown RBP eCLIP6.27□□□□□ -1.41
RN7SKP21-201ENST00000516503 ATG3Q9NT62 314 aa6.27□□□□□ -1.41
RN7SKP21-201ENST00000516503 ARFGEF2Q9Y6D5 1785 aa6.26□□□□□ -1.41
RN7SKP21-201ENST00000516503 CACNA1SQ13698 1873 aa6.26□□□□□ -1.41
RN7SKP21-201ENST00000516503 ATN1P54259 1190 aaPredicted RBP6.26□□□□□ -1.41
RN7SKP21-201ENST00000516503 BRPF1P55201 1214 aaPredicted RBP6.26□□□□□ -1.41
RN7SKP21-201ENST00000516503 MAP1SQ66K74 1059 aaPredicted RBP6.26□□□□□ -1.41
RN7SKP21-201ENST00000516503 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.26□□□□□ -1.41
RN7SKP21-201ENST00000516503 TTLL6Q8N841 843 aa6.26□□□□□ -1.41
RN7SKP21-201ENST00000516503 BEGAINQ9BUH8 593 aa6.26□□□□□ -1.41
RN7SKP21-201ENST00000516503 SRP68Q9UHB9 627 aaKnown RBP6.26□□□□□ -1.41
RN7SKP21-201ENST00000516503 ABT1Q9ULW3 272 aaKnown RBP6.26□□□□□ -1.41
RN7SKP21-201ENST00000516503 TLL2Q9Y6L7 1015 aa6.26□□□□□ -1.41
RN7SKP21-201ENST00000516503 EVC2Q86UK5 1308 aa6.25□□□□□ -1.41
RN7SKP21-201ENST00000516503 TJP1Q07157 1748 aa6.25□□□□□ -1.41
RN7SKP21-201ENST00000516503 SLX4Q8IY92 1834 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms