RNA–Protein interactions for RNA: ENST00000516503.1

RN7SKP21-201, Transcript of RNA, 7SK small nuclear pseudogene 21, humanhuman

BASIC

Gene RN7SKP21, Length 220 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP21-201ENST00000516503 AEBP2Q6ZN18 517 aaPredicted RBP13.51□□□□□ -0.25
RN7SKP21-201ENST00000516503 CHIC1Q5VXU3 224 aa12.64□□□□□ -0.39
RN7SKP21-201ENST00000516503 POTEDQ86YR6 584 aa11.79□□□□□ -0.52
RN7SKP21-201ENST00000516503 NISCHQ9Y2I1 1504 aa11.7□□□□□ -0.54
RN7SKP21-201ENST00000516503 SENP3Q9H4L4 574 aaPredicted RBP11.7□□□□□ -0.54
RN7SKP21-201ENST00000516503 PHF23Q9BUL5 403 aaPredicted RBP11.4□□□□□ -0.58
RN7SKP21-201ENST00000516503 ABCC9O60706 1549 aa11.24□□□□□ -0.61
RN7SKP21-201ENST00000516503 DNAJC5BQ9UF47 199 aa11.14□□□□□ -0.63
RN7SKP21-201ENST00000516503 FOXD1Q16676 465 aa10.97□□□□□ -0.65
RN7SKP21-201ENST00000516503 CCDC180Q9P1Z9 1646 aa10.77□□□□□ -0.68
RN7SKP21-201ENST00000516503 MSH5O43196 834 aa10.64□□□□□ -0.71
RN7SKP21-201ENST00000516503 DNAJC5Q9H3Z4 198 aa10.6□□□□□ -0.71
RN7SKP21-201ENST00000516503 RB1CC1Q8TDY2 1594 aa10.48□□□□□ -0.73
RN7SKP21-201ENST00000516503 UNC13AQ9UPW8 1703 aa10.34□□□□□ -0.75
RN7SKP21-201ENST00000516503 PABPN1Q86U42 306 aaKnown RBP eCLIP10.34□□□□□ -0.75
RN7SKP21-201ENST00000516503 NACADO15069 1562 aa10.29□□□□□ -0.76
RN7SKP21-201ENST00000516503 BICRAQ9NZM4 1560 aa10.29□□□□□ -0.76
RN7SKP21-201ENST00000516503 CECR2Q9BXF3 1484 aa10.19□□□□□ -0.78
RN7SKP21-201ENST00000516503 CC2D2AQ9P2K1 1620 aa10.18□□□□□ -0.78
RN7SKP21-201ENST00000516503 SHROOM4Q9ULL8 1493 aa10.05□□□□□ -0.8
RN7SKP21-201ENST00000516503 PIAS4Q8N2W9 510 aaPredicted RBP10.05□□□□□ -0.8
RN7SKP21-201ENST00000516503 MYO15BQ96JP2 1530 aa10.02□□□□□ -0.8
RN7SKP21-201ENST00000516503 EIF4G1Q04637 1599 aaKnown RBP10.02□□□□□ -0.81
RN7SKP21-201ENST00000516503 CUX2O14529 1486 aa9.95□□□□□ -0.82
RN7SKP21-201ENST00000516503 DCAF8L2P0C7V8 631 aa9.91□□□□□ -0.82
RN7SKP21-201ENST00000516503 TRIM41Q8WV44 630 aa9.76□□□□□ -0.85
RN7SKP21-201ENST00000516503 SCRIBQ14160 1630 aa9.7□□□□□ -0.86
RN7SKP21-201ENST00000516503 DCAF1Q9Y4B6 1507 aa9.68□□□□□ -0.86
RN7SKP21-201ENST00000516503 ERCC6Q03468 1493 aa9.67□□□□□ -0.86
RN7SKP21-201ENST00000516503 CACNB1Q02641 598 aaPredicted RBP9.62□□□□□ -0.87
RN7SKP21-201ENST00000516503 PPP6R1Q9UPN7 881 aa9.6□□□□□ -0.87
RN7SKP21-201ENST00000516503 ZCCHC6Q5VYS8 1495 aaKnown RBP9.59□□□□□ -0.87
RN7SKP21-201ENST00000516503 THOC2Q8NI27 1593 aaKnown RBP9.59□□□□□ -0.87
RN7SKP21-201ENST00000516503 NCAPD3P42695 1498 aa9.53□□□□□ -0.88
RN7SKP21-201ENST00000516503 NESP48681 1621 aa9.53□□□□□ -0.88
RN7SKP21-201ENST00000516503 ADRA2BP18089 450 aa9.51□□□□□ -0.89
RN7SKP21-201ENST00000516503 KIF21AQ7Z4S6 1674 aa9.41□□□□□ -0.9
RN7SKP21-201ENST00000516503 ATAD2BQ9ULI0 1458 aa9.4□□□□□ -0.9
RN7SKP21-201ENST00000516503 BAZ1AQ9NRL2 1556 aaPredicted RBP9.4□□□□□ -0.9
RN7SKP21-201ENST00000516503 HMGXB3Q12766 1538 aa9.4□□□□□ -0.91
RN7SKP21-201ENST00000516503 SMARCA2P51531 1590 aa9.38□□□□□ -0.91
RN7SKP21-201ENST00000516503 LAMC3Q9Y6N6 1575 aa9.38□□□□□ -0.91
RN7SKP21-201ENST00000516503 RIMBP3CA6NJZ7 1639 aa9.36□□□□□ -0.91
RN7SKP21-201ENST00000516503 RIMBP3BA6NNM3 1639 aa9.36□□□□□ -0.91
RN7SKP21-201ENST00000516503 RIMBP3Q9UFD9 1639 aa9.36□□□□□ -0.91
RN7SKP21-201ENST00000516503 OSCARQ8IYS5 282 aa9.34□□□□□ -0.91
RN7SKP21-201ENST00000516503 WDR62O43379 1518 aa9.31□□□□□ -0.92
RN7SKP21-201ENST00000516503 PDS5BQ9NTI5 1447 aa9.29□□□□□ -0.92
RN7SKP21-201ENST00000516503 MRC2Q9UBG0 1479 aa9.27□□□□□ -0.93
RN7SKP21-201ENST00000516503 ARHGEF11O15085 1522 aa9.26□□□□□ -0.93
RN7SKP21-201ENST00000516503 SMARCA4P51532 1647 aa9.25□□□□□ -0.93
RN7SKP21-201ENST00000516503 PLPPR3Q6T4P5 718 aa9.24□□□□□ -0.93
RN7SKP21-201ENST00000516503 PEG3Q9GZU2 1588 aa9.22□□□□□ -0.93
RN7SKP21-201ENST00000516503 BAZ1BQ9UIG0 1483 aaKnown RBP9.21□□□□□ -0.93
RN7SKP21-201ENST00000516503 CADPSQ9ULU8 1353 aa9.17□□□□□ -0.94
RN7SKP21-201ENST00000516503 TRHP20396 242 aaPredicted RBP9.15□□□□□ -0.94
RN7SKP21-201ENST00000516503 ARAP1Q96P48 1450 aa9.15□□□□□ -0.95
RN7SKP21-201ENST00000516503 DMRT2Q9Y5R5 561 aa9.14□□□□□ -0.95
RN7SKP21-201ENST00000516503 CYB5RLQ6IPT4 315 aa9.13□□□□□ -0.95
RN7SKP21-201ENST00000516503 ILDR1Q86SU0 546 aaPredicted RBP9.1□□□□□ -0.95
RN7SKP21-201ENST00000516503 CEP164Q9UPV0 1460 aa9.09□□□□□ -0.95
RN7SKP21-201ENST00000516503 POTEHQ6S545 545 aa9.08□□□□□ -0.96
RN7SKP21-201ENST00000516503 URB2Q14146 1524 aaKnown RBP9.06□□□□□ -0.96
RN7SKP21-201ENST00000516503 FANCD2Q9BXW9 1451 aa9.05□□□□□ -0.96
RN7SKP21-201ENST00000516503 ZNF608Q9ULD9 1512 aaPredicted RBP9.03□□□□□ -0.96
RN7SKP21-201ENST00000516503 RSF1Q96T23 1441 aaPredicted RBP9.02□□□□□ -0.97
RN7SKP21-201ENST00000516503 MROH2BQ7Z745 1585 aa9.02□□□□□ -0.97
RN7SKP21-201ENST00000516503 MAPK8IP2Q13387 824 aaPredicted RBP8.99□□□□□ -0.97
RN7SKP21-201ENST00000516503 CHD1O14646 1710 aa8.99□□□□□ -0.97
RN7SKP21-201ENST00000516503 CFTRP13569 1480 aa8.98□□□□□ -0.97
RN7SKP21-201ENST00000516503 RNF39Q9H2S5 420 aa8.98□□□□□ -0.97
RN7SKP21-201ENST00000516503 IFT140Q96RY7 1462 aa8.96□□□□□ -0.98
RN7SKP21-201ENST00000516503 EIF4G3O43432 1585 aaKnown RBP8.95□□□□□ -0.98
RN7SKP21-201ENST00000516503 CLASP1Q7Z460 1538 aa8.91□□□□□ -0.98
RN7SKP21-201ENST00000516503 WIZO95785 1651 aa8.87□□□□□ -0.99
RN7SKP21-201ENST00000516503 PRDM2Q13029 1718 aa8.86□□□□□ -0.99
RN7SKP21-201ENST00000516503 TARBP1Q13395 1621 aaKnown RBP8.86□□□□□ -0.99
RN7SKP21-201ENST00000516503 KDM4FA0A1W2PPD8 638 aa8.85□□□□□ -0.99
RN7SKP21-201ENST00000516503 TOPBP1Q92547 1522 aa8.85□□□□□ -0.99
RN7SKP21-201ENST00000516503 AQRO60306 1485 aaKnown RBP eCLIP8.84□□□□□ -0.99
RN7SKP21-201ENST00000516503 KIF13AQ9H1H9 1805 aa8.82□□□□□ -1
RN7SKP21-201ENST00000516503 C1QBPQ07021 282 aaKnown RBP8.82□□□□□ -1
RN7SKP21-201ENST00000516503 GAPVD1Q14C86 1478 aa8.79□□□□□ -1
RN7SKP21-201ENST00000516503 DCAF8L1A6NGE4 600 aa8.77□□□□□ -1.01
RN7SKP21-201ENST00000516503 FBLN2P98095 1184 aa8.77□□□□□ -1.01
RN7SKP21-201ENST00000516503 SYNJ1O43426 1573 aa8.77□□□□□ -1.01
RN7SKP21-201ENST00000516503 ABCC8Q09428 1581 aa8.76□□□□□ -1.01
RN7SKP21-201ENST00000516503 SCAF1Q9H7N4 1312 aaKnown RBP8.76□□□□□ -1.01
RN7SKP21-201ENST00000516503 DNMBPQ6XZF7 1577 aa8.75□□□□□ -1.01
RN7SKP21-201ENST00000516503 SNAPC4Q5SXM2 1469 aa8.73□□□□□ -1.01
RN7SKP21-201ENST00000516503 ERCC6L2Q5T890 1561 aa8.72□□□□□ -1.01
RN7SKP21-201ENST00000516503 POLA1P09884 1462 aaPredicted RBP8.71□□□□□ -1.01
RN7SKP21-201ENST00000516503 TOP2AP11388 1531 aaKnown RBP8.71□□□□□ -1.01
RN7SKP21-201ENST00000516503 WDR97A6NE52 1622 aa8.7□□□□□ -1.02
RN7SKP21-201ENST00000516503 MAGI1Q96QZ7 1491 aaPredicted RBP8.7□□□□□ -1.02
RN7SKP21-201ENST00000516503 HECW2Q9P2P5 1572 aa8.69□□□□□ -1.02
RN7SKP21-201ENST00000516503 TDRD9Q8NDG6 1382 aaKnown RBP8.68□□□□□ -1.02
RN7SKP21-201ENST00000516503 SYNJ2O15056 1496 aa8.68□□□□□ -1.02
RN7SKP21-201ENST00000516503 RAD54L2Q9Y4B4 1467 aa8.68□□□□□ -1.02
RN7SKP21-201ENST00000516503 FBXO41Q8TF61 875 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms