RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 ZNF215Q9UL58 517 aaPredicted RBP15.21■□□□□ 0.03
SMAD1-215ENST00000515385 LIMCH1Q9UPQ0 1083 aa15.21■□□□□ 0.03
SMAD1-215ENST00000515385 KIAA0232Q92628 1395 aa15.21■□□□□ 0.02
SMAD1-215ENST00000515385 TRIM6-TRIM34B2RNG4 842 aa15.2■□□□□ 0.02
SMAD1-215ENST00000515385 LRMPQ12912 555 aa15.2■□□□□ 0.02
SMAD1-215ENST00000515385 NYAP1Q6ZVC0 841 aa15.2■□□□□ 0.02
SMAD1-215ENST00000515385 C8orf58Q8NAV2 365 aa15.2■□□□□ 0.02
SMAD1-215ENST00000515385 TRIM34Q9BYJ4 488 aa15.2■□□□□ 0.02
SMAD1-215ENST00000515385 AOX1Q06278 1338 aa15.2■□□□□ 0.02
SMAD1-215ENST00000515385 SALL3Q9BXA9 1300 aa15.2■□□□□ 0.02
SMAD1-215ENST00000515385 ARAP3Q8WWN8 1544 aa15.2■□□□□ 0.02
SMAD1-215ENST00000515385 ELP1O95163 1332 aa15.2■□□□□ 0.02
SMAD1-215ENST00000515385 PSEN1P49768 467 aa15.2■□□□□ 0.02
SMAD1-215ENST00000515385 MUM1L1Q5H9M0 696 aa15.2■□□□□ 0.02
SMAD1-215ENST00000515385 TXLNBQ8N3L3 684 aa15.2■□□□□ 0.02
SMAD1-215ENST00000515385 UPF3BQ9BZI7 483 aaKnown RBP15.2■□□□□ 0.02
SMAD1-215ENST00000515385 PPLO60437 1756 aa15.19■□□□□ 0.02
SMAD1-215ENST00000515385 LMTK2Q8IWU2 1503 aa15.19■□□□□ 0.02
SMAD1-215ENST00000515385 ELL2O00472 640 aaPredicted RBP15.19■□□□□ 0.02
SMAD1-215ENST00000515385 TUBB4AP04350 444 aa15.19■□□□□ 0.02
SMAD1-215ENST00000515385 HSP90B1P14625 803 aaKnown RBP15.19■□□□□ 0.02
SMAD1-215ENST00000515385 HNRNPH2P55795 449 aaKnown RBP15.19■□□□□ 0.02
SMAD1-215ENST00000515385 RTF1Q92541 710 aaKnown RBP15.19■□□□□ 0.02
SMAD1-215ENST00000515385 CBX8Q9HC52 389 aa15.19■□□□□ 0.02
SMAD1-215ENST00000515385 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.19■□□□□ 0.02
SMAD1-215ENST00000515385 CLIP2Q9UDT6 1046 aa15.19■□□□□ 0.02
SMAD1-215ENST00000515385 RAD50Q92878 1312 aa15.18■□□□□ 0.02
SMAD1-215ENST00000515385 APBB1O00213 710 aa15.18■□□□□ 0.02
SMAD1-215ENST00000515385 CTR9Q6PD62 1173 aa15.18■□□□□ 0.02
SMAD1-215ENST00000515385 CABP2Q9NPB3 220 aa15.18■□□□□ 0.02
SMAD1-215ENST00000515385 DDX19AQ9NUU7 478 aaKnown RBP15.18■□□□□ 0.02
SMAD1-215ENST00000515385 STAP2Q9UGK3 403 aa15.18■□□□□ 0.02
SMAD1-215ENST00000515385 ZCCHC11Q5TAX3 1644 aaKnown RBP15.18■□□□□ 0.02
SMAD1-215ENST00000515385 H2AFXP16104 143 aaPredicted RBP15.18■□□□□ 0.02
SMAD1-215ENST00000515385 TPM4P67936 248 aa15.18■□□□□ 0.02
SMAD1-215ENST00000515385 LUZP1Q86V48 1076 aa15.18■□□□□ 0.02
SMAD1-215ENST00000515385 CACTINQ8WUQ7 758 aaKnown RBP15.18■□□□□ 0.02
SMAD1-215ENST00000515385 CNKSR2Q8WXI2 1034 aa15.18■□□□□ 0.02
SMAD1-215ENST00000515385 ZNF592Q92610 1267 aa15.18■□□□□ 0.02
SMAD1-215ENST00000515385 TTC14Q96N46 770 aa15.18■□□□□ 0.02
SMAD1-215ENST00000515385 HDAC5Q9UQL6 1122 aa15.18■□□□□ 0.02
SMAD1-215ENST00000515385 FRMPD1Q5SYB0 1578 aa15.17■□□□□ 0.02
SMAD1-215ENST00000515385 RBM43Q6ZSC3 357 aaKnown RBP15.17■□□□□ 0.02
SMAD1-215ENST00000515385 ZSCAN31Q96LW9 406 aaPredicted RBP15.17■□□□□ 0.02
SMAD1-215ENST00000515385 ARHGEF28Q8N1W1 1705 aaKnown RBP15.17■□□□□ 0.02
SMAD1-215ENST00000515385 TCHHQ07283 1943 aa15.17■□□□□ 0.02
SMAD1-215ENST00000515385 MSH6P52701 1360 aa15.17■□□□□ 0.02
SMAD1-215ENST00000515385 KIF3BO15066 747 aa15.16■□□□□ 0.02
SMAD1-215ENST00000515385 DNM1Q05193 864 aaKnown RBP15.16■□□□□ 0.02
SMAD1-215ENST00000515385 ELF2Q15723 593 aa15.16■□□□□ 0.02
SMAD1-215ENST00000515385 SARM1Q6SZW1 724 aa15.16■□□□□ 0.02
SMAD1-215ENST00000515385 LRRC8AQ8IWT6 810 aa15.16■□□□□ 0.02
SMAD1-215ENST00000515385 TNMDQ9H2S6 317 aa15.16■□□□□ 0.02
SMAD1-215ENST00000515385 NRBP1Q9UHY1 535 aa15.16■□□□□ 0.02
SMAD1-215ENST00000515385 MTMR6Q9Y217 621 aa15.16■□□□□ 0.02
SMAD1-215ENST00000515385 MROH1Q8NDA8 1641 aa15.16■□□□□ 0.02
SMAD1-215ENST00000515385 ATP8B1O43520 1251 aa15.16■□□□□ 0.02
SMAD1-215ENST00000515385 KRT85P78386 507 aa15.16■□□□□ 0.02
SMAD1-215ENST00000515385 RAD51AP2Q09MP3 1159 aa15.16■□□□□ 0.02
SMAD1-215ENST00000515385 ANO6Q4KMQ2 910 aa15.16■□□□□ 0.02
SMAD1-215ENST00000515385 TMEM132EQ6IEE7 984 aa15.16■□□□□ 0.02
SMAD1-215ENST00000515385 MRFAP1L1Q96HT8 127 aa15.16■□□□□ 0.02
SMAD1-215ENST00000515385 THUMPD2Q9BTF0 503 aaKnown RBP15.16■□□□□ 0.02
SMAD1-215ENST00000515385 LRRCC1Q9C099 1032 aa15.16■□□□□ 0.02
SMAD1-215ENST00000515385 SH2B1Q9NRF2 756 aaPredicted RBP15.16■□□□□ 0.02
SMAD1-215ENST00000515385 HDGFL2Q7Z4V5 671 aaPredicted RBP15.15■□□□□ 0.02
SMAD1-215ENST00000515385 PHACTR3Q96KR7 559 aa15.15■□□□□ 0.02
SMAD1-215ENST00000515385 ATP7AQ04656 1500 aa15.15■□□□□ 0.02
SMAD1-215ENST00000515385 TUBGCP6Q96RT7 1819 aa15.15■□□□□ 0.02
SMAD1-215ENST00000515385 TNNT3P45378 269 aaPredicted RBP15.15■□□□□ 0.02
SMAD1-215ENST00000515385 GPS2Q13227 327 aa15.15■□□□□ 0.02
SMAD1-215ENST00000515385 MEIS3Q99687 375 aa15.15■□□□□ 0.02
SMAD1-215ENST00000515385 ARGLU1Q9NWB6 273 aaPredicted RBP15.15■□□□□ 0.02
SMAD1-215ENST00000515385 ZNF446Q9NWS9 450 aa15.15■□□□□ 0.02
SMAD1-215ENST00000515385 RIMS2Q9UQ26 1411 aa15.15■□□□□ 0.02
SMAD1-215ENST00000515385 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.14■□□□□ 0.01
SMAD1-215ENST00000515385 RILPL2Q969X0 211 aa15.14■□□□□ 0.01
SMAD1-215ENST00000515385 RASSF4Q9H2L5 321 aa15.14■□□□□ 0.01
SMAD1-215ENST00000515385 V9GYY5 206 aaPredicted RBP15.14■□□□□ 0.01
SMAD1-215ENST00000515385 CCT4P50991 539 aaKnown RBP15.13■□□□□ 0.01
SMAD1-215ENST00000515385 AK2P54819 239 aa15.13■□□□□ 0.01
SMAD1-215ENST00000515385 DHX8Q14562 1220 aaKnown RBP15.13■□□□□ 0.01
SMAD1-215ENST00000515385 FILIP1Q7Z7B0 1213 aa15.13■□□□□ 0.01
SMAD1-215ENST00000515385 L2HGDHQ9H9P8 463 aa15.13■□□□□ 0.01
SMAD1-215ENST00000515385 CWC15Q9P013 229 aaKnown RBP15.13■□□□□ 0.01
SMAD1-215ENST00000515385 FHOD1Q9Y613 1164 aa15.13■□□□□ 0.01
SMAD1-215ENST00000515385 SCAND2PQ9GZW5 306 aaPredicted RBP15.13■□□□□ 0.01
SMAD1-215ENST00000515385 CLSTN2Q9H4D0 955 aa15.13■□□□□ 0.01
SMAD1-215ENST00000515385 SKILP12757 684 aa15.12■□□□□ 0.01
SMAD1-215ENST00000515385 GJB2P29033 226 aa15.12■□□□□ 0.01
SMAD1-215ENST00000515385 ZNF165P49910 485 aa15.12■□□□□ 0.01
SMAD1-215ENST00000515385 SRPK2P78362 688 aaKnown RBP15.12■□□□□ 0.01
SMAD1-215ENST00000515385 TPRNQ4KMQ1 711 aa15.12■□□□□ 0.01
SMAD1-215ENST00000515385 RUFY3Q7L099 469 aa15.12■□□□□ 0.01
SMAD1-215ENST00000515385 AFAP1Q8N556 730 aa15.12■□□□□ 0.01
SMAD1-215ENST00000515385 SNX14Q9Y5W7 946 aa15.12■□□□□ 0.01
SMAD1-215ENST00000515385 CDK12Q9NYV4 1490 aaPredicted RBP15.12■□□□□ 0.01
SMAD1-215ENST00000515385 CHGAP10645 457 aaKnown RBP15.12■□□□□ 0.01
SMAD1-215ENST00000515385 CCAR2Q8N163 923 aaKnown RBP15.12■□□□□ 0.01
SMAD1-215ENST00000515385 NPHP3Q7Z494 1330 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms