RNA–Protein interactions for RNA: ENST00000506727.1

PKD2-204, Transcript of polycystin 2, transient receptor potential cation channel, humanhuman

TSL 4

Gene PKD2, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD2-204ENST00000506727 ITPK1Q13572 414 aa12.25□□□□□ -0.45
PKD2-204ENST00000506727 ARHGEF1Q92888 912 aaKnown RBP12.25□□□□□ -0.45
PKD2-204ENST00000506727 CLEC11AQ9Y240 323 aa12.25□□□□□ -0.45
PKD2-204ENST00000506727 EAPPQ56P03 285 aaPredicted RBP12.24□□□□□ -0.45
PKD2-204ENST00000506727 MAP1SQ66K74 1059 aaPredicted RBP12.24□□□□□ -0.45
PKD2-204ENST00000506727 FAM208AQ9UK61 1670 aaKnown RBP12.24□□□□□ -0.45
PKD2-204ENST00000506727 RTCBQ9Y3I0 505 aaKnown RBP12.24□□□□□ -0.45
PKD2-204ENST00000506727 LTN1O94822 1766 aa12.23□□□□□ -0.45
PKD2-204ENST00000506727 DDR1Q08345 913 aa12.23□□□□□ -0.45
PKD2-204ENST00000506727 TTLL6Q8N841 843 aa12.23□□□□□ -0.45
PKD2-204ENST00000506727 TLL2Q9Y6L7 1015 aa12.22□□□□□ -0.45
PKD2-204ENST00000506727 CGNL1Q0VF96 1302 aa12.21□□□□□ -0.45
PKD2-204ENST00000506727 PITPNM1O00562 1244 aa12.21□□□□□ -0.45
PKD2-204ENST00000506727 RFC4P35249 363 aa12.21□□□□□ -0.45
PKD2-204ENST00000506727 PNMA8AQ86V59 439 aaPredicted RBP12.21□□□□□ -0.45
PKD2-204ENST00000506727 SPDYE1Q8NFV5 336 aaPredicted RBP12.21□□□□□ -0.45
PKD2-204ENST00000506727 PIGBQ92521 554 aa12.21□□□□□ -0.45
PKD2-204ENST00000506727 USP31Q70CQ4 1352 aa12.2□□□□□ -0.46
PKD2-204ENST00000506727 ATP6V1AP38606 617 aa12.2□□□□□ -0.46
PKD2-204ENST00000506727 CST9Q5W186 159 aa12.2□□□□□ -0.46
PKD2-204ENST00000506727 CIAPIN1Q6FI81 312 aa12.2□□□□□ -0.46
PKD2-204ENST00000506727 HACL1Q9UJ83 578 aa12.2□□□□□ -0.46
PKD2-204ENST00000506727 HPS5Q9UPZ3 1129 aa12.2□□□□□ -0.46
PKD2-204ENST00000506727 COLQQ9Y215 455 aaPredicted RBP12.2□□□□□ -0.46
PKD2-204ENST00000506727 ITGB4P16144 1822 aa12.19□□□□□ -0.46
PKD2-204ENST00000506727 EPHX2P34913 555 aa12.19□□□□□ -0.46
PKD2-204ENST00000506727 IP6K1Q92551 441 aa12.19□□□□□ -0.46
PKD2-204ENST00000506727 DLEC1Q9Y238 1755 aa12.19□□□□□ -0.46
PKD2-204ENST00000506727 LTBP3Q9NS15 1303 aa12.18□□□□□ -0.46
PKD2-204ENST00000506727 AMER1Q5JTC6 1135 aaPredicted RBP12.18□□□□□ -0.46
PKD2-204ENST00000506727 RC3H1Q5TC82 1133 aaKnown RBP12.18□□□□□ -0.46
PKD2-204ENST00000506727 CTU1Q7Z7A3 348 aaKnown RBP12.18□□□□□ -0.46
PKD2-204ENST00000506727 MIER1Q8N108 512 aa12.18□□□□□ -0.46
PKD2-204ENST00000506727 HHIPL1Q96JK4 782 aa12.18□□□□□ -0.46
PKD2-204ENST00000506727 UNC80Q8N2C7 3258 aa12.18□□□□□ -0.46
PKD2-204ENST00000506727 TRIOBPQ9H2D6 2365 aa12.18□□□□□ -0.46
PKD2-204ENST00000506727 POLRMTO00411 1230 aaKnown RBP12.17□□□□□ -0.46
PKD2-204ENST00000506727 FMR1Q06787 632 aaKnown RBP eCLIP12.17□□□□□ -0.46
PKD2-204ENST00000506727 LTV1Q96GA3 475 aaPredicted RBP12.17□□□□□ -0.46
PKD2-204ENST00000506727 MPHOSPH9Q99550 1183 aa12.17□□□□□ -0.46
PKD2-204ENST00000506727 SMG6Q86US8 1419 aaKnown RBP12.17□□□□□ -0.46
PKD2-204ENST00000506727 INSRP06213 1382 aa12.17□□□□□ -0.46
PKD2-204ENST00000506727 FER1L6Q2WGJ9 1857 aa12.17□□□□□ -0.46
PKD2-204ENST00000506727 PCDH11XQ9BZA7 1347 aa12.16□□□□□ -0.46
PKD2-204ENST00000506727 PCDH11YQ9BZA8 1340 aa12.16□□□□□ -0.46
PKD2-204ENST00000506727 CD163L1Q9NR16 1453 aa12.16□□□□□ -0.46
PKD2-204ENST00000506727 RPS6KA4O75676 772 aa12.16□□□□□ -0.46
PKD2-204ENST00000506727 TM4SF1P30408 202 aa12.16□□□□□ -0.46
PKD2-204ENST00000506727 SAPCD2Q86UD0 394 aa12.16□□□□□ -0.46
PKD2-204ENST00000506727 SAGE1Q9NXZ1 904 aa12.16□□□□□ -0.46
PKD2-204ENST00000506727 RANBP2P49792 3224 aaKnown RBP12.16□□□□□ -0.46
PKD2-204ENST00000506727 STAC3Q96MF2 364 aa12.15□□□□□ -0.46
PKD2-204ENST00000506727 MAP3K19Q56UN5 1328 aa12.14□□□□□ -0.47
PKD2-204ENST00000506727 PLCD3Q8N3E9 789 aa12.14□□□□□ -0.47
PKD2-204ENST00000506727 ASAP1Q9ULH1 1129 aa12.14□□□□□ -0.47
PKD2-204ENST00000506727 KDM2AQ9Y2K7 1162 aa12.14□□□□□ -0.47
PKD2-204ENST00000506727 TRPM7Q96QT4 1865 aa12.14□□□□□ -0.47
PKD2-204ENST00000506727 CYP27B1O15528 508 aa12.13□□□□□ -0.47
PKD2-204ENST00000506727 PKN2Q16513 984 aaKnown RBP12.13□□□□□ -0.47
PKD2-204ENST00000506727 TAOK3Q9H2K8 898 aa12.13□□□□□ -0.47
PKD2-204ENST00000506727 BRCA2P51587 3418 aa12.13□□□□□ -0.47
PKD2-204ENST00000506727 CNTNAP4Q9C0A0 1308 aa12.12□□□□□ -0.47
PKD2-204ENST00000506727 C21orf2O43822 256 aa12.12□□□□□ -0.47
PKD2-204ENST00000506727 NOGQ13253 232 aa12.12□□□□□ -0.47
PKD2-204ENST00000506727 AKAP4Q5JQC9 854 aa12.12□□□□□ -0.47
PKD2-204ENST00000506727 MPNDQ8N594 471 aa12.12□□□□□ -0.47
PKD2-204ENST00000506727 DCAF11Q8TEB1 546 aa12.12□□□□□ -0.47
PKD2-204ENST00000506727 ZIC5Q96T25 663 aa12.12□□□□□ -0.47
PKD2-204ENST00000506727 SRP68Q9UHB9 627 aaKnown RBP12.12□□□□□ -0.47
PKD2-204ENST00000506727 RGPD2P0DJD1 1756 aa12.12□□□□□ -0.47
PKD2-204ENST00000506727 USP42Q9H9J4 1324 aaKnown RBP12.11□□□□□ -0.47
PKD2-204ENST00000506727 KDRP35968 1356 aa12.11□□□□□ -0.47
PKD2-204ENST00000506727 KTN1Q86UP2 1357 aaKnown RBP12.11□□□□□ -0.47
PKD2-204ENST00000506727 LOC105371045A0A1W2PR82 267 aa12.11□□□□□ -0.47
PKD2-204ENST00000506727 H0YIN7 160 aa12.11□□□□□ -0.47
PKD2-204ENST00000506727 C2CD5Q86YS7 1000 aa12.11□□□□□ -0.47
PKD2-204ENST00000506727 RAPGEF4Q8WZA2 1011 aa12.11□□□□□ -0.47
PKD2-204ENST00000506727 TRAF5O00463 557 aa12.1□□□□□ -0.47
PKD2-204ENST00000506727 PRR29P0C7W0 189 aa12.1□□□□□ -0.47
PKD2-204ENST00000506727 NKX1-1Q15270 411 aaPredicted RBP12.1□□□□□ -0.47
PKD2-204ENST00000506727 SLC4A9Q96Q91 983 aa12.1□□□□□ -0.47
PKD2-204ENST00000506727 COL25A1Q9BXS0 654 aaPredicted RBP12.1□□□□□ -0.47
PKD2-204ENST00000506727 VCANP13611 3396 aa12.1□□□□□ -0.47
PKD2-204ENST00000506727 RNF123Q5XPI4 1314 aa12.1□□□□□ -0.47
PKD2-204ENST00000506727 ZNF541Q9H0D2 1346 aa12.1□□□□□ -0.47
PKD2-204ENST00000506727 CENPJQ9HC77 1338 aaPredicted RBP12.1□□□□□ -0.47
PKD2-204ENST00000506727 ZNF831Q5JPB2 1677 aa12.1□□□□□ -0.47
PKD2-204ENST00000506727 TATP17735 454 aaPredicted RBP12.09□□□□□ -0.47
PKD2-204ENST00000506727 NBPF6Q5VWK0 638 aa12.09□□□□□ -0.47
PKD2-204ENST00000506727 NME9Q86XW9 330 aa12.09□□□□□ -0.47
PKD2-204ENST00000506727 NBPF4Q96M43 638 aa12.09□□□□□ -0.47
PKD2-204ENST00000506727 ATG3Q9NT62 314 aa12.09□□□□□ -0.47
PKD2-204ENST00000506727 NRXN2Q9P2S2 1712 aa12.08□□□□□ -0.47
PKD2-204ENST00000506727 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.08□□□□□ -0.481e-6■■■■□ 22.9
PKD2-204ENST00000506727 OTUD5Q96G74 571 aa12.08□□□□□ -0.48
PKD2-204ENST00000506727 TMOD3Q9NYL9 352 aa12.08□□□□□ -0.48
PKD2-204ENST00000506727 COL5A3P25940 1745 aaPredicted RBP12.08□□□□□ -0.48
PKD2-204ENST00000506727 RNF186Q9NXI6 227 aa12.07□□□□□ -0.48
PKD2-204ENST00000506727 AFDNP55196 1824 aaKnown RBP12.07□□□□□ -0.48
PKD2-204ENST00000506727 CEP290O15078 2479 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms