RNA–Protein interactions for RNA: ENST00000506727.1

PKD2-204, Transcript of polycystin 2, transient receptor potential cation channel, humanhuman

TSL 4

Gene PKD2, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD2-204ENST00000506727 AEBP2Q6ZN18 517 aaPredicted RBP22.48■■□□□ 1.19
PKD2-204ENST00000506727 NISCHQ9Y2I1 1504 aa22.31■■□□□ 1.16
PKD2-204ENST00000506727 CHIC1Q5VXU3 224 aa21.99■■□□□ 1.11
PKD2-204ENST00000506727 ABCC9O60706 1549 aa21.79■■□□□ 1.08
PKD2-204ENST00000506727 DNAJC5BQ9UF47 199 aa21.66■■□□□ 1.06
PKD2-204ENST00000506727 DNAJC5Q9H3Z4 198 aa20.85■□□□□ 0.93
PKD2-204ENST00000506727 CCDC180Q9P1Z9 1646 aa20.56■□□□□ 0.88
PKD2-204ENST00000506727 RB1CC1Q8TDY2 1594 aa20.2■□□□□ 0.82
PKD2-204ENST00000506727 PABPN1Q86U42 306 aaKnown RBP eCLIP20.09■□□□□ 0.81
PKD2-204ENST00000506727 CECR2Q9BXF3 1484 aa19.79■□□□□ 0.76
PKD2-204ENST00000506727 NACADO15069 1562 aa19.77■□□□□ 0.76
PKD2-204ENST00000506727 UNC13AQ9UPW8 1703 aa19.69■□□□□ 0.74
PKD2-204ENST00000506727 BICRAQ9NZM4 1560 aa19.69■□□□□ 0.74
PKD2-204ENST00000506727 CC2D2AQ9P2K1 1620 aa19.63■□□□□ 0.73
PKD2-204ENST00000506727 PHF23Q9BUL5 403 aaPredicted RBP19.51■□□□□ 0.71
PKD2-204ENST00000506727 CUX2O14529 1486 aa19.35■□□□□ 0.69
PKD2-204ENST00000506727 SHROOM4Q9ULL8 1493 aa19.31■□□□□ 0.68
PKD2-204ENST00000506727 DCAF8L2P0C7V8 631 aa19.31■□□□□ 0.68
PKD2-204ENST00000506727 TRIM41Q8WV44 630 aa19.3■□□□□ 0.68
PKD2-204ENST00000506727 EIF4G1Q04637 1599 aaKnown RBP19.28■□□□□ 0.68
PKD2-204ENST00000506727 MYO15BQ96JP2 1530 aa19.12■□□□□ 0.65
PKD2-204ENST00000506727 ERCC6Q03468 1493 aa18.89■□□□□ 0.61
PKD2-204ENST00000506727 SENP3Q9H4L4 574 aaPredicted RBP18.8■□□□□ 0.6
PKD2-204ENST00000506727 SCRIBQ14160 1630 aa18.65■□□□□ 0.58
PKD2-204ENST00000506727 THOC2Q8NI27 1593 aaKnown RBP18.43■□□□□ 0.54
PKD2-204ENST00000506727 DCAF1Q9Y4B6 1507 aa18.39■□□□□ 0.53
PKD2-204ENST00000506727 NESP48681 1621 aa18.36■□□□□ 0.53
PKD2-204ENST00000506727 NCAPD3P42695 1498 aa18.3■□□□□ 0.52
PKD2-204ENST00000506727 OSCARQ8IYS5 282 aa18.26■□□□□ 0.51
PKD2-204ENST00000506727 ZCCHC6Q5VYS8 1495 aaKnown RBP18.2■□□□□ 0.5
PKD2-204ENST00000506727 BAZ1AQ9NRL2 1556 aaPredicted RBP18.19■□□□□ 0.5
PKD2-204ENST00000506727 SMARCA2P51531 1590 aa18.15■□□□□ 0.5
PKD2-204ENST00000506727 RIMBP3CA6NJZ7 1639 aa18.12■□□□□ 0.49
PKD2-204ENST00000506727 RIMBP3BA6NNM3 1639 aa18.12■□□□□ 0.49
PKD2-204ENST00000506727 RIMBP3Q9UFD9 1639 aa18.12■□□□□ 0.49
PKD2-204ENST00000506727 TRHP20396 242 aaPredicted RBP18.08■□□□□ 0.48
PKD2-204ENST00000506727 KIF21AQ7Z4S6 1674 aa18.05■□□□□ 0.48
PKD2-204ENST00000506727 LAMC3Q9Y6N6 1575 aa18.04■□□□□ 0.48
PKD2-204ENST00000506727 ATAD2BQ9ULI0 1458 aa18.03■□□□□ 0.48
PKD2-204ENST00000506727 ILDR1Q86SU0 546 aaPredicted RBP18.02■□□□□ 0.48
PKD2-204ENST00000506727 HMGXB3Q12766 1538 aa18.01■□□□□ 0.47
PKD2-204ENST00000506727 PDS5BQ9NTI5 1447 aa17.99■□□□□ 0.47
PKD2-204ENST00000506727 ARHGEF11O15085 1522 aa17.95■□□□□ 0.46
PKD2-204ENST00000506727 WDR62O43379 1518 aa17.91■□□□□ 0.46
PKD2-204ENST00000506727 MRC2Q9UBG0 1479 aa17.9■□□□□ 0.46
PKD2-204ENST00000506727 CYB5RLQ6IPT4 315 aa17.9■□□□□ 0.46
PKD2-204ENST00000506727 PLPPR3Q6T4P5 718 aa17.86■□□□□ 0.45
PKD2-204ENST00000506727 BAZ1BQ9UIG0 1483 aaKnown RBP17.75■□□□□ 0.43
PKD2-204ENST00000506727 ARAP1Q96P48 1450 aa17.69■□□□□ 0.42
PKD2-204ENST00000506727 CADPSQ9ULU8 1353 aa17.66■□□□□ 0.42
PKD2-204ENST00000506727 SMARCA4P51532 1647 aa17.65■□□□□ 0.42
PKD2-204ENST00000506727 FOXD1Q16676 465 aa17.59■□□□□ 0.41
PKD2-204ENST00000506727 CEP164Q9UPV0 1460 aa17.56■□□□□ 0.4
PKD2-204ENST00000506727 PEG3Q9GZU2 1588 aa17.54■□□□□ 0.4
PKD2-204ENST00000506727 RSF1Q96T23 1441 aaPredicted RBP17.47■□□□□ 0.39
PKD2-204ENST00000506727 FANCD2Q9BXW9 1451 aa17.44■□□□□ 0.38
PKD2-204ENST00000506727 URB2Q14146 1524 aaKnown RBP17.38■□□□□ 0.37
PKD2-204ENST00000506727 ZNF608Q9ULD9 1512 aaPredicted RBP17.37■□□□□ 0.37
PKD2-204ENST00000506727 IFT140Q96RY7 1462 aa17.28■□□□□ 0.36
PKD2-204ENST00000506727 CHD1O14646 1710 aa17.27■□□□□ 0.35
PKD2-204ENST00000506727 KDM4FA0A1W2PPD8 638 aa17.25■□□□□ 0.35
PKD2-204ENST00000506727 CFTRP13569 1480 aa17.19■□□□□ 0.34
PKD2-204ENST00000506727 PPP6R1Q9UPN7 881 aa17.18■□□□□ 0.34
PKD2-204ENST00000506727 EIF4G3O43432 1585 aaKnown RBP17.18■□□□□ 0.34
PKD2-204ENST00000506727 MROH2BQ7Z745 1585 aa17.16■□□□□ 0.34
PKD2-204ENST00000506727 FBLN2P98095 1184 aa17.16■□□□□ 0.34
PKD2-204ENST00000506727 ADRA2BP18089 450 aa17.12■□□□□ 0.33
PKD2-204ENST00000506727 CLASP1Q7Z460 1538 aa17.11■□□□□ 0.33
PKD2-204ENST00000506727 FBXO41Q8TF61 875 aa17.1■□□□□ 0.33
PKD2-204ENST00000506727 ERCC6L2Q5T890 1561 aa17.06■□□□□ 0.32
PKD2-204ENST00000506727 AQRO60306 1485 aaKnown RBP eCLIP17.05■□□□□ 0.32
PKD2-204ENST00000506727 GAPVD1Q14C86 1478 aa17.02■□□□□ 0.32
PKD2-204ENST00000506727 LMTK3Q96Q04 1460 aa17.01■□□□□ 0.31
PKD2-204ENST00000506727 SOCS7O14512 581 aa16.97■□□□□ 0.31
PKD2-204ENST00000506727 TOPBP1Q92547 1522 aa16.96■□□□□ 0.3
PKD2-204ENST00000506727 KIF13AQ9H1H9 1805 aa16.95■□□□□ 0.3
PKD2-204ENST00000506727 SYNJ1O43426 1573 aa16.94■□□□□ 0.3
PKD2-204ENST00000506727 HECW2Q9P2P5 1572 aa16.94■□□□□ 0.3
PKD2-204ENST00000506727 TARBP1Q13395 1621 aaKnown RBP16.92■□□□□ 0.3
PKD2-204ENST00000506727 ABCC8Q09428 1581 aa16.86■□□□□ 0.29
PKD2-204ENST00000506727 WIZO95785 1651 aa16.85■□□□□ 0.29
PKD2-204ENST00000506727 CHMP7Q8WUX9 453 aaPredicted RBP16.85■□□□□ 0.29
PKD2-204ENST00000506727 PRDM2Q13029 1718 aa16.82■□□□□ 0.28
PKD2-204ENST00000506727 ILDR2Q71H61 639 aa16.82■□□□□ 0.28
PKD2-204ENST00000506727 SNAPC4Q5SXM2 1469 aa16.81■□□□□ 0.28
PKD2-204ENST00000506727 KDM6BO15054 1643 aa16.78■□□□□ 0.28
PKD2-204ENST00000506727 DNMBPQ6XZF7 1577 aa16.77■□□□□ 0.28
PKD2-204ENST00000506727 ADGRL1O94910 1474 aa16.76■□□□□ 0.27
PKD2-204ENST00000506727 SYNJ2O15056 1496 aa16.75■□□□□ 0.27
PKD2-204ENST00000506727 MAGI1Q96QZ7 1491 aaPredicted RBP16.74■□□□□ 0.27
PKD2-204ENST00000506727 FAM69CQ0P6D2 419 aa16.74■□□□□ 0.27
PKD2-204ENST00000506727 TDRD9Q8NDG6 1382 aaKnown RBP16.74■□□□□ 0.27
PKD2-204ENST00000506727 ABCC10Q5T3U5 1492 aa16.73■□□□□ 0.27
PKD2-204ENST00000506727 POLA1P09884 1462 aaPredicted RBP16.71■□□□□ 0.27
PKD2-204ENST00000506727 WDR97A6NE52 1622 aa16.66■□□□□ 0.26
PKD2-204ENST00000506727 RAD54L2Q9Y4B4 1467 aa16.66■□□□□ 0.26
PKD2-204ENST00000506727 DISP3Q9P2K9 1392 aa16.64■□□□□ 0.25
PKD2-204ENST00000506727 SOGA1O94964 1423 aa16.62■□□□□ 0.25
PKD2-204ENST00000506727 GRIN2BQ13224 1484 aa16.61■□□□□ 0.25
PKD2-204ENST00000506727 DIP2BQ9P265 1576 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms