RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 ADGRG1Q9Y653 693 aa10.05□□□□□ -0.8
CDC42-205ENST00000498236 NFAT5O94916 1531 aa10.05□□□□□ -0.8
CDC42-205ENST00000498236 USP19O94966 1318 aa10.05□□□□□ -0.8
CDC42-205ENST00000498236 NPHP3Q7Z494 1330 aa10.05□□□□□ -0.8
CDC42-205ENST00000498236 PHRF1Q9P1Y6 1649 aaKnown RBP10.04□□□□□ -0.8
CDC42-205ENST00000498236 ALS2Q96Q42 1657 aa10.04□□□□□ -0.8
CDC42-205ENST00000498236 FAM161AQ3B820 660 aa10.04□□□□□ -0.8
CDC42-205ENST00000498236 METTL3Q86U44 580 aaKnown RBP10.04□□□□□ -0.8
CDC42-205ENST00000498236 CDCA7LQ96GN5 454 aa10.04□□□□□ -0.8
CDC42-205ENST00000498236 PHOX2BQ99453 314 aa10.04□□□□□ -0.8
CDC42-205ENST00000498236 TMUB1Q9BVT8 246 aa10.04□□□□□ -0.8
CDC42-205ENST00000498236 RSPH6AQ9H0K4 717 aa10.04□□□□□ -0.8
CDC42-205ENST00000498236 VPS9D1Q9Y2B5 631 aa10.04□□□□□ -0.8
CDC42-205ENST00000498236 RGPD1P0DJD0 1748 aa10.04□□□□□ -0.8
CDC42-205ENST00000498236 RNF123Q5XPI4 1314 aa10.04□□□□□ -0.8
CDC42-205ENST00000498236 PXDNQ92626 1479 aa10.04□□□□□ -0.8
CDC42-205ENST00000498236 E9PSI1 815 aa10.03□□□□□ -0.8
CDC42-205ENST00000498236 SLFN5Q08AF3 891 aa10.03□□□□□ -0.8
CDC42-205ENST00000498236 EIF4A2Q14240 407 aaKnown RBP10.03□□□□□ -0.8
CDC42-205ENST00000498236 WDR63Q8IWG1 891 aa10.03□□□□□ -0.8
CDC42-205ENST00000498236 WWC1Q8IX03 1113 aa10.03□□□□□ -0.8
CDC42-205ENST00000498236 SLAIN2Q9P270 581 aa10.03□□□□□ -0.8
CDC42-205ENST00000498236 SALL2Q9Y467 1007 aaPredicted RBP10.03□□□□□ -0.8
CDC42-205ENST00000498236 ARHGEF10O15013 1369 aa10.02□□□□□ -0.8
CDC42-205ENST00000498236 MS4A1P11836 297 aa10.02□□□□□ -0.81
CDC42-205ENST00000498236 TMPOP42166 694 aaKnown RBP10.02□□□□□ -0.81
CDC42-205ENST00000498236 HSP90AB2PQ58FF8 381 aa10.02□□□□□ -0.81
CDC42-205ENST00000498236 DUSP27Q5VZP5 1158 aa10.02□□□□□ -0.81
CDC42-205ENST00000498236 BRINP3Q76B58 766 aa10.02□□□□□ -0.81
CDC42-205ENST00000498236 PXYLP1Q8TE99 480 aa10.02□□□□□ -0.81
CDC42-205ENST00000498236 SLC4A5Q9BY07 1137 aa10.02□□□□□ -0.81
CDC42-205ENST00000498236 MAPK8IP3Q9UPT6 1336 aa10.02□□□□□ -0.81
CDC42-205ENST00000498236 KDRP35968 1356 aa10.01□□□□□ -0.81
CDC42-205ENST00000498236 TNS3Q68CZ2 1445 aa10.01□□□□□ -0.81
CDC42-205ENST00000498236 LTBP4Q8N2S1 1624 aa10.01□□□□□ -0.81
CDC42-205ENST00000498236 SENP3-EIF4A1A0A087X0R7 540 aa10.01□□□□□ -0.81
CDC42-205ENST00000498236 NEFLP07196 543 aa10.01□□□□□ -0.81
CDC42-205ENST00000498236 PTPREP23469 700 aa10.01□□□□□ -0.81
CDC42-205ENST00000498236 HOXC9P31274 260 aa10.01□□□□□ -0.81
CDC42-205ENST00000498236 AMPHP49418 695 aa10.01□□□□□ -0.81
CDC42-205ENST00000498236 IP6K1Q92551 441 aa10.01□□□□□ -0.81
CDC42-205ENST00000498236 SUPT16HQ9Y5B9 1047 aaKnown RBP10.01□□□□□ -0.81
CDC42-205ENST00000498236 MED1Q15648 1581 aaPredicted RBP10.01□□□□□ -0.81
CDC42-205ENST00000498236 PPP1R3GB7ZBB8 358 aa10□□□□□ -0.81
CDC42-205ENST00000498236 GCP02774 474 aa10□□□□□ -0.81
CDC42-205ENST00000498236 NEFMP07197 916 aa10□□□□□ -0.81
CDC42-205ENST00000498236 COL9A1P20849 921 aa10□□□□□ -0.81
CDC42-205ENST00000498236 PRKAR2BP31323 418 aa10□□□□□ -0.81
CDC42-205ENST00000498236 PTPN5P54829 565 aa10□□□□□ -0.81
CDC42-205ENST00000498236 NUTM2GQ5VZR2 741 aa10□□□□□ -0.81
CDC42-205ENST00000498236 ERICH6BQ5W0A0 696 aa10□□□□□ -0.81
CDC42-205ENST00000498236 ARHGEF25Q86VW2 580 aa10□□□□□ -0.81
CDC42-205ENST00000498236 RBM46Q8TBY0 533 aaKnown RBP10□□□□□ -0.81
CDC42-205ENST00000498236 SOS2Q07890 1332 aaPredicted RBP10□□□□□ -0.81
CDC42-205ENST00000498236 IL16Q14005 1332 aa10□□□□□ -0.81
CDC42-205ENST00000498236 SPATA31A3Q5VYP0 1347 aa10□□□□□ -0.81
CDC42-205ENST00000498236 IGSF1Q8N6C5 1336 aa10□□□□□ -0.81
CDC42-205ENST00000498236 ABCC6O95255 1503 aa9.99□□□□□ -0.81
CDC42-205ENST00000498236 RGS20O76081 388 aa9.99□□□□□ -0.81
CDC42-205ENST00000498236 SSTR3P32745 418 aaPredicted RBP9.99□□□□□ -0.81
CDC42-205ENST00000498236 XPCQ01831 940 aaPredicted RBP9.99□□□□□ -0.81
CDC42-205ENST00000498236 NFE2L2Q16236 605 aa9.99□□□□□ -0.81
CDC42-205ENST00000498236 GOPCQ9HD26 462 aa9.99□□□□□ -0.81
CDC42-205ENST00000498236 LTN1O94822 1766 aa9.98□□□□□ -0.81
CDC42-205ENST00000498236 IFFO2Q5TF58 517 aa9.98□□□□□ -0.81
CDC42-205ENST00000498236 RCAN3Q9UKA8 241 aa9.98□□□□□ -0.81
CDC42-205ENST00000498236 RRP7AQ9Y3A4 280 aaKnown RBP9.98□□□□□ -0.81
CDC42-205ENST00000498236 NHSL1Q5SYE7 1610 aa9.97□□□□□ -0.81
CDC42-205ENST00000498236 GOLGA8CPA6NN73 597 aa9.97□□□□□ -0.81
CDC42-205ENST00000498236 HMOX1P09601 288 aa9.97□□□□□ -0.81
CDC42-205ENST00000498236 RIPK4P57078 832 aa9.97□□□□□ -0.81
CDC42-205ENST00000498236 SULT6B1Q6IMI4 303 aa9.97□□□□□ -0.81
CDC42-205ENST00000498236 NLRP7Q8WX94 980 aa9.97□□□□□ -0.81
CDC42-205ENST00000498236 PHACTR3Q96KR7 559 aa9.97□□□□□ -0.81
CDC42-205ENST00000498236 MYH16Q9H6N6 1097 aa9.97□□□□□ -0.81
CDC42-205ENST00000498236 CRYBG1Q9Y4K1 1723 aa9.96□□□□□ -0.81
CDC42-205ENST00000498236 CALD1Q05682 793 aaKnown RBP9.96□□□□□ -0.82
CDC42-205ENST00000498236 LMOD3Q0VAK6 560 aa9.96□□□□□ -0.82
CDC42-205ENST00000498236 DDX17Q92841 729 aaKnown RBP9.96□□□□□ -0.82
CDC42-205ENST00000498236 EYA1Q99502 592 aa9.96□□□□□ -0.82
CDC42-205ENST00000498236 FAM217BQ9NTX9 383 aaPredicted RBP9.96□□□□□ -0.82
CDC42-205ENST00000498236 FAM198AQ9UFP1 575 aa9.96□□□□□ -0.82
CDC42-205ENST00000498236 CPDO75976 1380 aa9.96□□□□□ -0.82
CDC42-205ENST00000498236 NCAPD2Q15021 1401 aa9.96□□□□□ -0.82
CDC42-205ENST00000498236 CT47B1P0C2W7 299 aaPredicted RBP9.95□□□□□ -0.82
CDC42-205ENST00000498236 AEBP1Q8IUX7 1158 aa9.95□□□□□ -0.82
CDC42-205ENST00000498236 TSKSQ9UJT2 592 aa9.95□□□□□ -0.82
CDC42-205ENST00000498236 CAMTA1Q9Y6Y1 1673 aa9.94□□□□□ -0.82
CDC42-205ENST00000498236 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.94□□□□□ -0.82
CDC42-205ENST00000498236 BHMG1C9JSJ3 638 aaPredicted RBP9.94□□□□□ -0.82
CDC42-205ENST00000498236 BEGAINQ9BUH8 593 aa9.94□□□□□ -0.82
CDC42-205ENST00000498236 AHDC1Q5TGY3 1603 aaPredicted RBP9.93□□□□□ -0.82
CDC42-205ENST00000498236 PLEKHG2Q9H7P9 1386 aa9.93□□□□□ -0.82
CDC42-205ENST00000498236 TRIM6-TRIM34B2RNG4 842 aa9.93□□□□□ -0.82
CDC42-205ENST00000498236 NBPF26B4DH59 902 aa9.93□□□□□ -0.82
CDC42-205ENST00000498236 RRP1P56182 461 aaKnown RBP9.93□□□□□ -0.82
CDC42-205ENST00000498236 THSD4Q6ZMP0 1018 aa9.93□□□□□ -0.82
CDC42-205ENST00000498236 PACS2Q86VP3 889 aa9.93□□□□□ -0.82
CDC42-205ENST00000498236 MRPL50Q8N5N7 158 aaKnown RBP9.93□□□□□ -0.82
CDC42-205ENST00000498236 PCMTD1Q96MG8 357 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 157.4 ms