RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 FIBPO43427 364 aa15.43■□□□□ 0.06
VEGFA-215ENST00000497139 HNRNPH2P55795 449 aaKnown RBP15.43■□□□□ 0.06
VEGFA-215ENST00000497139 SALL3Q9BXA9 1300 aa15.43■□□□□ 0.06
VEGFA-215ENST00000497139 H2AFXP16104 143 aaPredicted RBP15.42■□□□□ 0.06
VEGFA-215ENST00000497139 CHMLP26374 656 aa15.42■□□□□ 0.06
VEGFA-215ENST00000497139 LRMPQ12912 555 aa15.42■□□□□ 0.06
VEGFA-215ENST00000497139 PTPN14Q15678 1187 aa15.42■□□□□ 0.06
VEGFA-215ENST00000497139 NUP62CLQ9H1M0 184 aa15.42■□□□□ 0.06
VEGFA-215ENST00000497139 ANO2Q9NQ90 1003 aa15.42■□□□□ 0.06
VEGFA-215ENST00000497139 PTPRCP08575 1304 aa15.42■□□□□ 0.06
VEGFA-215ENST00000497139 KIF20BQ96Q89 1820 aa15.42■□□□□ 0.06
VEGFA-215ENST00000497139 PRKAR2BP31323 418 aa15.42■□□□□ 0.06
VEGFA-215ENST00000497139 HSPA4P34932 840 aa15.42■□□□□ 0.06
VEGFA-215ENST00000497139 CHRM1P11229 460 aaPredicted RBP15.41■□□□□ 0.06
VEGFA-215ENST00000497139 RAD51AP2Q09MP3 1159 aa15.41■□□□□ 0.06
VEGFA-215ENST00000497139 RBM43Q6ZSC3 357 aaKnown RBP15.41■□□□□ 0.06
VEGFA-215ENST00000497139 TRIM5Q9C035 493 aa15.41■□□□□ 0.06
VEGFA-215ENST00000497139 AOX1Q06278 1338 aa15.41■□□□□ 0.06
VEGFA-215ENST00000497139 RAD50Q92878 1312 aa15.41■□□□□ 0.06
VEGFA-215ENST00000497139 HECW2Q9P2P5 1572 aa15.41■□□□□ 0.06
VEGFA-215ENST00000497139 TUBB4AP04350 444 aa15.41■□□□□ 0.06
VEGFA-215ENST00000497139 SMC3Q9UQE7 1217 aa15.41■□□□□ 0.06
VEGFA-215ENST00000497139 TPM4P67936 248 aa15.4■□□□□ 0.06
VEGFA-215ENST00000497139 NOL8Q76FK4 1167 aaKnown RBP15.4■□□□□ 0.06
VEGFA-215ENST00000497139 CDK12Q9NYV4 1490 aaPredicted RBP15.4■□□□□ 0.06
VEGFA-215ENST00000497139 CLTCQ00610 1675 aaKnown RBP15.4■□□□□ 0.06
VEGFA-215ENST00000497139 SARM1Q6SZW1 724 aa15.4■□□□□ 0.06
VEGFA-215ENST00000497139 CBX8Q9HC52 389 aa15.4■□□□□ 0.06
VEGFA-215ENST00000497139 TERF2IPQ9NYB0 399 aa15.4■□□□□ 0.06
VEGFA-215ENST00000497139 CLIP2Q9UDT6 1046 aa15.4■□□□□ 0.06
VEGFA-215ENST00000497139 LIMCH1Q9UPQ0 1083 aa15.4■□□□□ 0.06
VEGFA-215ENST00000497139 ELF2Q15723 593 aa15.39■□□□□ 0.05
VEGFA-215ENST00000497139 CACTINQ8WUQ7 758 aaKnown RBP15.39■□□□□ 0.05
VEGFA-215ENST00000497139 DDX19AQ9NUU7 478 aaKnown RBP15.39■□□□□ 0.05
VEGFA-215ENST00000497139 MSH6P52701 1360 aa15.39■□□□□ 0.05
VEGFA-215ENST00000497139 FYB1O15117 783 aa15.39■□□□□ 0.05
VEGFA-215ENST00000497139 ATP8B1O43520 1251 aa15.39■□□□□ 0.05
VEGFA-215ENST00000497139 TTC14Q96N46 770 aa15.39■□□□□ 0.05
VEGFA-215ENST00000497139 UPF3BQ9BZI7 483 aaKnown RBP15.39■□□□□ 0.05
VEGFA-215ENST00000497139 RASSF4Q9H2L5 321 aa15.39■□□□□ 0.05
VEGFA-215ENST00000497139 GGNBP2Q9H3C7 697 aa15.39■□□□□ 0.05
VEGFA-215ENST00000497139 ZNF446Q9NWS9 450 aa15.39■□□□□ 0.05
VEGFA-215ENST00000497139 GEMIN8Q9NWZ8 242 aaKnown RBP15.39■□□□□ 0.05
VEGFA-215ENST00000497139 LUZP1Q86V48 1076 aa15.38■□□□□ 0.05
VEGFA-215ENST00000497139 LRRC8AQ8IWT6 810 aa15.38■□□□□ 0.05
VEGFA-215ENST00000497139 RGS22Q8NE09 1264 aa15.38■□□□□ 0.05
VEGFA-215ENST00000497139 RTF1Q92541 710 aaKnown RBP15.38■□□□□ 0.05
VEGFA-215ENST00000497139 STAP2Q9UGK3 403 aa15.38■□□□□ 0.05
VEGFA-215ENST00000497139 C8orf58Q8NAV2 365 aa15.38■□□□□ 0.05
VEGFA-215ENST00000497139 MRFAP1L1Q96HT8 127 aa15.38■□□□□ 0.05
VEGFA-215ENST00000497139 FHOD1Q9Y613 1164 aa15.38■□□□□ 0.05
VEGFA-215ENST00000497139 RIMS2Q9UQ26 1411 aa15.38■□□□□ 0.05
VEGFA-215ENST00000497139 ZNF592Q92610 1267 aa15.37■□□□□ 0.05
VEGFA-215ENST00000497139 L2HGDHQ9H9P8 463 aa15.37■□□□□ 0.05
VEGFA-215ENST00000497139 V9GYY5 206 aaPredicted RBP15.37■□□□□ 0.05
VEGFA-215ENST00000497139 NPATQ14207 1427 aa15.37■□□□□ 0.05
VEGFA-215ENST00000497139 ERBB3P21860 1342 aa15.37■□□□□ 0.05
VEGFA-215ENST00000497139 TNNT3P45378 269 aaPredicted RBP15.37■□□□□ 0.05
VEGFA-215ENST00000497139 GPS2Q13227 327 aa15.37■□□□□ 0.05
VEGFA-215ENST00000497139 NRBP1Q9UHY1 535 aa15.37■□□□□ 0.05
VEGFA-215ENST00000497139 CAMSAP1Q5T5Y3 1602 aa15.37■□□□□ 0.05
VEGFA-215ENST00000497139 AATKQ6ZMQ8 1374 aa15.37■□□□□ 0.05
VEGFA-215ENST00000497139 ANO6Q4KMQ2 910 aa15.37■□□□□ 0.05
VEGFA-215ENST00000497139 ARGLU1Q9NWB6 273 aaPredicted RBP15.37■□□□□ 0.05
VEGFA-215ENST00000497139 CWC15Q9P013 229 aaKnown RBP15.37■□□□□ 0.05
VEGFA-215ENST00000497139 MTMR6Q9Y217 621 aa15.37■□□□□ 0.05
VEGFA-215ENST00000497139 CD163L1Q9NR16 1453 aa15.36■□□□□ 0.05
VEGFA-215ENST00000497139 ADGRL3Q9HAR2 1447 aa15.36■□□□□ 0.05
VEGFA-215ENST00000497139 KRT85P78386 507 aa15.36■□□□□ 0.05
VEGFA-215ENST00000497139 DNM1Q05193 864 aaKnown RBP15.36■□□□□ 0.05
VEGFA-215ENST00000497139 ZSCAN31Q96LW9 406 aaPredicted RBP15.36■□□□□ 0.05
VEGFA-215ENST00000497139 TNMDQ9H2S6 317 aa15.36■□□□□ 0.05
VEGFA-215ENST00000497139 SH2B1Q9NRF2 756 aaPredicted RBP15.36■□□□□ 0.05
VEGFA-215ENST00000497139 DLG5Q8TDM6 1919 aa15.36■□□□□ 0.05
VEGFA-215ENST00000497139 TTC21BQ7Z4L5 1316 aa15.35■□□□□ 0.05
VEGFA-215ENST00000497139 PNMA6AP0CW24 399 aaPredicted RBP15.35■□□□□ 0.05
VEGFA-215ENST00000497139 DHX8Q14562 1220 aaKnown RBP15.35■□□□□ 0.05
VEGFA-215ENST00000497139 FILIP1Q7Z7B0 1213 aa15.35■□□□□ 0.05
VEGFA-215ENST00000497139 NEO1Q92859 1461 aa15.35■□□□□ 0.05
VEGFA-215ENST00000497139 ABCC3O15438 1527 aa15.34■□□□□ 0.05
VEGFA-215ENST00000497139 ELL2O00472 640 aaPredicted RBP15.34■□□□□ 0.05
VEGFA-215ENST00000497139 PAXIP1Q6ZW49 1069 aaPredicted RBP15.34■□□□□ 0.05
VEGFA-215ENST00000497139 LRRCC1Q9C099 1032 aa15.34■□□□□ 0.05
VEGFA-215ENST00000497139 CLSTN2Q9H4D0 955 aa15.34■□□□□ 0.05
VEGFA-215ENST00000497139 APBB1O00213 710 aa15.34■□□□□ 0.05
VEGFA-215ENST00000497139 CCAR2Q8N163 923 aaKnown RBP15.34■□□□□ 0.05
VEGFA-215ENST00000497139 ST7Q9NRC1 585 aa15.34■□□□□ 0.05
VEGFA-215ENST00000497139 NPHP3Q7Z494 1330 aa15.34■□□□□ 0.05
VEGFA-215ENST00000497139 TTC21AQ8NDW8 1320 aa15.34■□□□□ 0.05
VEGFA-215ENST00000497139 ZRANB2O95218 330 aaKnown RBP eCLIP15.33■□□□□ 0.054e-17■■□□□ 11.4
VEGFA-215ENST00000497139 KCNJ6P48051 423 aa15.33■□□□□ 0.05
VEGFA-215ENST00000497139 AK2P54819 239 aa15.33■□□□□ 0.05
VEGFA-215ENST00000497139 MEIS3Q99687 375 aa15.33■□□□□ 0.05
VEGFA-215ENST00000497139 SCAND2PQ9GZW5 306 aaPredicted RBP15.33■□□□□ 0.05
VEGFA-215ENST00000497139 CABP2Q9NPB3 220 aa15.33■□□□□ 0.05
VEGFA-215ENST00000497139 SKILP12757 684 aa15.33■□□□□ 0.04
VEGFA-215ENST00000497139 ZNF165P49910 485 aa15.33■□□□□ 0.04
VEGFA-215ENST00000497139 TPM1P09493 284 aa15.32■□□□□ 0.04
VEGFA-215ENST00000497139 NOP2P46087 812 aaKnown RBP15.32■□□□□ 0.04
VEGFA-215ENST00000497139 PLA2G4AP47712 749 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms