RNA–Protein interactions for RNA: ENST00000491366.5

SEC22A-209, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 482 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-209ENST00000491366 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.5■■□□□ 1.67
SEC22A-209ENST00000491366 GNAI1P63096 354 aa25.5■■□□□ 1.67
SEC22A-209ENST00000491366 QSER1Q2KHR3 1735 aa25.5■■□□□ 1.67
SEC22A-209ENST00000491366 MBIPQ9NS73 344 aa25.5■■□□□ 1.67
SEC22A-209ENST00000491366 UBR3Q6ZT12 1888 aa25.49■■□□□ 1.67
SEC22A-209ENST00000491366 ZBTB7AO95365 584 aa25.49■■□□□ 1.67
SEC22A-209ENST00000491366 SSFA2P28290 1259 aa25.49■■□□□ 1.67
SEC22A-209ENST00000491366 USP16Q9Y5T5 823 aa25.49■■□□□ 1.67
SEC22A-209ENST00000491366 RPS6KA4O75676 772 aa25.48■■□□□ 1.67
SEC22A-209ENST00000491366 ZNF853P0CG23 659 aa25.48■■□□□ 1.67
SEC22A-209ENST00000491366 CANXP27824 592 aaKnown RBP25.48■■□□□ 1.67
SEC22A-209ENST00000491366 FLAD1Q8NFF5 587 aa25.48■■□□□ 1.67
SEC22A-209ENST00000491366 ZBTB1Q9Y2K1 713 aa25.48■■□□□ 1.67
SEC22A-209ENST00000491366 MYH14Q7Z406 1995 aaKnown RBP25.47■■□□□ 1.67
SEC22A-209ENST00000491366 GIGYF1O75420 1035 aaPredicted RBP25.47■■□□□ 1.67
SEC22A-209ENST00000491366 NGEFQ8N5V2 710 aa25.47■■□□□ 1.67
SEC22A-209ENST00000491366 A1BGP04217 495 aa25.46■■□□□ 1.67
SEC22A-209ENST00000491366 KRT24Q2M2I5 525 aa25.46■■□□□ 1.67
SEC22A-209ENST00000491366 TRAPPC3LQ5T215 181 aa25.46■■□□□ 1.67
SEC22A-209ENST00000491366 ZNF330Q9Y3S2 320 aaPredicted RBP25.45■■□□□ 1.66
SEC22A-209ENST00000491366 PIP4K2AP48426 406 aaPredicted RBP25.44■■□□□ 1.66
SEC22A-209ENST00000491366 WDR63Q8IWG1 891 aa25.44■■□□□ 1.66
SEC22A-209ENST00000491366 TSR2Q969E8 191 aaKnown RBP25.44■■□□□ 1.66
SEC22A-209ENST00000491366 ATF5Q9Y2D1 282 aaPredicted RBP25.44■■□□□ 1.66
SEC22A-209ENST00000491366 SOS1Q07889 1333 aaPredicted RBP25.43■■□□□ 1.66
SEC22A-209ENST00000491366 IL16Q14005 1332 aa25.43■■□□□ 1.66
SEC22A-209ENST00000491366 ARHGEF1Q92888 912 aaKnown RBP25.43■■□□□ 1.66
SEC22A-209ENST00000491366 LAMB4A4D0S4 1761 aa25.43■■□□□ 1.66
SEC22A-209ENST00000491366 ADRA2BP18089 450 aa25.42■■□□□ 1.66
SEC22A-209ENST00000491366 MTFR1LQ9H019 292 aa25.42■■□□□ 1.66
SEC22A-209ENST00000491366 EIF2S2P20042 333 aaKnown RBP25.41■■□□□ 1.66
SEC22A-209ENST00000491366 RFC4P35249 363 aa25.41■■□□□ 1.66
SEC22A-209ENST00000491366 MSL1Q68DK7 614 aa25.41■■□□□ 1.66
SEC22A-209ENST00000491366 SLC16A10Q8TF71 515 aa25.41■■□□□ 1.66
SEC22A-209ENST00000491366 SPON1Q9HCB6 807 aa25.4■■□□□ 1.66
SEC22A-209ENST00000491366 COL15A1P39059 1388 aa25.4■■□□□ 1.66
SEC22A-209ENST00000491366 NECTIN2Q92692 538 aa25.39■■□□□ 1.66
SEC22A-209ENST00000491366 ZNF521Q96K83 1311 aa25.38■■□□□ 1.65
SEC22A-209ENST00000491366 DUSP27Q5VZP5 1158 aa25.38■■□□□ 1.65
SEC22A-209ENST00000491366 ARXQ96QS3 562 aa25.38■■□□□ 1.65
SEC22A-209ENST00000491366 SPINK5Q9NQ38 1064 aaPredicted RBP25.38■■□□□ 1.65
SEC22A-209ENST00000491366 FANCIQ9NVI1 1328 aa25.37■■□□□ 1.65
SEC22A-209ENST00000491366 NBPF26B4DH59 902 aa25.37■■□□□ 1.65
SEC22A-209ENST00000491366 ELL2O00472 640 aaPredicted RBP25.37■■□□□ 1.65
SEC22A-209ENST00000491366 IL6STP40189 918 aaPredicted RBP25.37■■□□□ 1.65
SEC22A-209ENST00000491366 EIF5P55010 431 aaKnown RBP25.37■■□□□ 1.65
SEC22A-209ENST00000491366 NBPF10Q6P3W6 841 aaKnown RBP25.37■■□□□ 1.65
SEC22A-209ENST00000491366 NPM2Q86SE8 214 aaKnown RBP25.37■■□□□ 1.65
SEC22A-209ENST00000491366 NBPF15Q8N660 670 aa25.37■■□□□ 1.65
SEC22A-209ENST00000491366 SRP68Q9UHB9 627 aaKnown RBP25.37■■□□□ 1.65
SEC22A-209ENST00000491366 C4AP0C0L4 1744 aa25.37■■□□□ 1.65
SEC22A-209ENST00000491366 C8orf58Q8NAV2 365 aa25.36■■□□□ 1.65
SEC22A-209ENST00000491366 A0A087WZG4 1122 aa25.34■■□□□ 1.65
SEC22A-209ENST00000491366 ZPR1O75312 459 aa25.34■■□□□ 1.65
SEC22A-209ENST00000491366 MYL6BP14649 208 aa25.34■■□□□ 1.65
SEC22A-209ENST00000491366 HNRNPUQ00839 825 aaKnown RBP eCLIP25.34■■□□□ 1.65
SEC22A-209ENST00000491366 MYH16Q9H6N6 1097 aa25.34■■□□□ 1.65
SEC22A-209ENST00000491366 USP42Q9H9J4 1324 aaKnown RBP25.34■■□□□ 1.65
SEC22A-209ENST00000491366 HOXB7P09629 217 aa25.33■■□□□ 1.65
SEC22A-209ENST00000491366 GOLGA2Q08379 1002 aa25.33■■□□□ 1.65
SEC22A-209ENST00000491366 HDGFL1Q5TGJ6 251 aa25.33■■□□□ 1.65
SEC22A-209ENST00000491366 TBC1D2BQ9UPU7 963 aa25.33■■□□□ 1.65
SEC22A-209ENST00000491366 LRP5O75197 1615 aa25.33■■□□□ 1.65
SEC22A-209ENST00000491366 PTGER2P43116 358 aa25.32■■□□□ 1.64
SEC22A-209ENST00000491366 USPL1Q5W0Q7 1092 aa25.32■■□□□ 1.64
SEC22A-209ENST00000491366 TSPYL6Q8N831 410 aa25.32■■□□□ 1.64
SEC22A-209ENST00000491366 NARFQ9UHQ1 456 aa25.32■■□□□ 1.64
SEC22A-209ENST00000491366 ANXA1P04083 346 aa25.31■■□□□ 1.64
SEC22A-209ENST00000491366 GYS1P13807 737 aa25.31■■□□□ 1.64
SEC22A-209ENST00000491366 POLD1P28340 1107 aa25.31■■□□□ 1.64
SEC22A-209ENST00000491366 ERBB4Q15303 1308 aa25.31■■□□□ 1.64
SEC22A-209ENST00000491366 PROSER3Q2NL68 480 aa25.3■■□□□ 1.64
SEC22A-209ENST00000491366 DZIP3Q86Y13 1208 aaKnown RBP25.3■■□□□ 1.64
SEC22A-209ENST00000491366 PPP1R1BQ9UD71 204 aaPredicted RBP25.3■■□□□ 1.64
SEC22A-209ENST00000491366 EXOSC9Q06265 439 aaKnown RBP25.29■■□□□ 1.64
SEC22A-209ENST00000491366 SGIP1Q9BQI5 828 aa25.29■■□□□ 1.64
SEC22A-209ENST00000491366 CHPF2Q9P2E5 772 aa25.29■■□□□ 1.64
SEC22A-209ENST00000491366 FKBP8Q14318 412 aa25.28■■□□□ 1.64
SEC22A-209ENST00000491366 PDIA6Q15084 440 aa25.28■■□□□ 1.64
SEC22A-209ENST00000491366 TWISTNBQ3B726 338 aaPredicted RBP25.28■■□□□ 1.64
SEC22A-209ENST00000491366 NLGN1Q8N2Q7 840 aa25.28■■□□□ 1.64
SEC22A-209ENST00000491366 CDCA7LQ96GN5 454 aa25.28■■□□□ 1.64
SEC22A-209ENST00000491366 E9PSI1 815 aa25.27■■□□□ 1.64
SEC22A-209ENST00000491366 BCL2L12Q9HB09 334 aa25.26■■□□□ 1.63
SEC22A-209ENST00000491366 CAMTA2O94983 1202 aa25.25■■□□□ 1.63
SEC22A-209ENST00000491366 MMP10P09238 476 aa25.25■■□□□ 1.63
SEC22A-209ENST00000491366 SLFN5Q08AF3 891 aa25.25■■□□□ 1.63
SEC22A-209ENST00000491366 DDX21Q9NR30 783 aaKnown RBP eCLIP25.25■■□□□ 1.63
SEC22A-209ENST00000491366 COL24A1Q17RW2 1714 aa25.25■■□□□ 1.63
SEC22A-209ENST00000491366 SCN7AQ01118 1682 aa25.24■■□□□ 1.63
SEC22A-209ENST00000491366 KIF6Q6ZMV9 814 aa25.24■■□□□ 1.63
SEC22A-209ENST00000491366 TTLL7Q6ZT98 887 aa25.24■■□□□ 1.63
SEC22A-209ENST00000491366 DBF4Q9UBU7 674 aaPredicted RBP25.24■■□□□ 1.63
SEC22A-209ENST00000491366 TCERG1O14776 1098 aaKnown RBP25.23■■□□□ 1.63
SEC22A-209ENST00000491366 CCDC30Q5VVM6 783 aa25.23■■□□□ 1.63
SEC22A-209ENST00000491366 LRP10Q7Z4F1 713 aa25.23■■□□□ 1.63
SEC22A-209ENST00000491366 AIMP1Q12904 312 aaKnown RBP25.22■■□□□ 1.63
SEC22A-209ENST00000491366 BICDL1Q6ZP65 573 aa25.22■■□□□ 1.63
SEC22A-209ENST00000491366 KLHL34Q8N239 644 aa25.22■■□□□ 1.63
SEC22A-209ENST00000491366 XAGE3Q8WTP9 111 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 371.5 ms