RNA–Protein interactions for RNA: ENST00000490546.1

PUM1-210, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 4

Gene PUM1, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-210ENST00000490546 FRAT1Q92837 279 aaPredicted RBP13.22□□□□□ -0.29
PUM1-210ENST00000490546 DDX21Q9NR30 783 aaKnown RBP eCLIP13.22□□□□□ -0.29
PUM1-210ENST00000490546 HYPKQ9NX55 129 aa13.22□□□□□ -0.29
PUM1-210ENST00000490546 SUPT16HQ9Y5B9 1047 aaKnown RBP13.22□□□□□ -0.29
PUM1-210ENST00000490546 EP400Q96L91 3159 aa13.22□□□□□ -0.29
PUM1-210ENST00000490546 KIF16BQ96L93 1317 aa13.21□□□□□ -0.29
PUM1-210ENST00000490546 BAG6P46379 1132 aa13.21□□□□□ -0.29
PUM1-210ENST00000490546 MRPL50Q8N5N7 158 aaKnown RBP13.21□□□□□ -0.29
PUM1-210ENST00000490546 SLC4A9Q96Q91 983 aa13.21□□□□□ -0.29
PUM1-210ENST00000490546 CHPF2Q9P2E5 772 aa13.21□□□□□ -0.29
PUM1-210ENST00000490546 A1BGP04217 495 aa13.2□□□□□ -0.3
PUM1-210ENST00000490546 CYP19A1P11511 503 aaPredicted RBP13.2□□□□□ -0.3
PUM1-210ENST00000490546 MS4A1P11836 297 aa13.2□□□□□ -0.3
PUM1-210ENST00000490546 MYL6BP14649 208 aa13.2□□□□□ -0.3
PUM1-210ENST00000490546 BRPF1P55201 1214 aaPredicted RBP13.2□□□□□ -0.3
PUM1-210ENST00000490546 C5P01031 1676 aa13.19□□□□□ -0.3
PUM1-210ENST00000490546 DDX58O95786 925 aaKnown RBP13.19□□□□□ -0.3
PUM1-210ENST00000490546 ITPK1Q13572 414 aa13.19□□□□□ -0.3
PUM1-210ENST00000490546 TXNRD1Q16881 649 aa13.19□□□□□ -0.3
PUM1-210ENST00000490546 ZKSCAN2Q63HK3 967 aa13.19□□□□□ -0.3
PUM1-210ENST00000490546 CCDC87Q9NVE4 849 aa13.19□□□□□ -0.3
PUM1-210ENST00000490546 NOB1Q9ULX3 412 aaKnown RBP13.19□□□□□ -0.3
PUM1-210ENST00000490546 LAMB4A4D0S4 1761 aa13.19□□□□□ -0.3
PUM1-210ENST00000490546 ZNF831Q5JPB2 1677 aa13.18□□□□□ -0.3
PUM1-210ENST00000490546 NEFLP07196 543 aa13.18□□□□□ -0.3
PUM1-210ENST00000490546 CRKLP46109 303 aaKnown RBP13.18□□□□□ -0.3
PUM1-210ENST00000490546 RRP1P56182 461 aaKnown RBP13.18□□□□□ -0.3
PUM1-210ENST00000490546 KCNQ4P56696 695 aa13.18□□□□□ -0.3
PUM1-210ENST00000490546 RC3H1Q5TC82 1133 aaKnown RBP13.18□□□□□ -0.3
PUM1-210ENST00000490546 ARXQ96QS3 562 aa13.18□□□□□ -0.3
PUM1-210ENST00000490546 API5Q9BZZ5 524 aaKnown RBP13.18□□□□□ -0.3
PUM1-210ENST00000490546 ZNF330Q9Y3S2 320 aaPredicted RBP13.18□□□□□ -0.3
PUM1-210ENST00000490546 LY75O60449 1722 aa13.18□□□□□ -0.3
PUM1-210ENST00000490546 PTPRCP08575 1304 aa13.17□□□□□ -0.3
PUM1-210ENST00000490546 ANXA1P04083 346 aa13.17□□□□□ -0.3
PUM1-210ENST00000490546 AIMP1Q12904 312 aaKnown RBP13.17□□□□□ -0.3
PUM1-210ENST00000490546 FLIIQ13045 1269 aa13.17□□□□□ -0.3
PUM1-210ENST00000490546 FKBP5Q13451 457 aaPredicted RBP13.17□□□□□ -0.3
PUM1-210ENST00000490546 LINC00116Q8NCU8 138 aa13.17□□□□□ -0.3
PUM1-210ENST00000490546 ARHGAP45Q92619 1136 aa13.17□□□□□ -0.3
PUM1-210ENST00000490546 AK7Q96M32 723 aa13.17□□□□□ -0.3
PUM1-210ENST00000490546 A0A087WZG4 1122 aa13.16□□□□□ -0.3
PUM1-210ENST00000490546 PLIN1O60240 522 aa13.16□□□□□ -0.3
PUM1-210ENST00000490546 IL6STP40189 918 aaPredicted RBP13.16□□□□□ -0.3
PUM1-210ENST00000490546 PIP4K2AP48426 406 aaPredicted RBP13.16□□□□□ -0.3
PUM1-210ENST00000490546 EN1Q05925 392 aaPredicted RBP13.16□□□□□ -0.3
PUM1-210ENST00000490546 PDIA6Q15084 440 aa13.16□□□□□ -0.3
PUM1-210ENST00000490546 PROSER3Q2NL68 480 aa13.16□□□□□ -0.3
PUM1-210ENST00000490546 ATF7IPQ6VMQ6 1270 aa13.16□□□□□ -0.3
PUM1-210ENST00000490546 FTSJ3Q8IY81 847 aaKnown RBP13.16□□□□□ -0.3
PUM1-210ENST00000490546 TJP1Q07157 1748 aa13.16□□□□□ -0.3
PUM1-210ENST00000490546 TNS1Q9HBL0 1735 aaKnown RBP13.16□□□□□ -0.3
PUM1-210ENST00000490546 CNTNAP4Q9C0A0 1308 aa13.15□□□□□ -0.3
PUM1-210ENST00000490546 NBPF26B4DH59 902 aa13.15□□□□□ -0.3
PUM1-210ENST00000490546 NBPF14Q5TI25 921 aa13.15□□□□□ -0.3
PUM1-210ENST00000490546 NBPF10Q6P3W6 841 aaKnown RBP13.15□□□□□ -0.3
PUM1-210ENST00000490546 INTS5Q6P9B9 1019 aaKnown RBP13.15□□□□□ -0.3
PUM1-210ENST00000490546 KIF6Q6ZMV9 814 aa13.15□□□□□ -0.3
PUM1-210ENST00000490546 COPS6Q7L5N1 327 aa13.15□□□□□ -0.3
PUM1-210ENST00000490546 G2E3Q7L622 706 aa13.15□□□□□ -0.3
PUM1-210ENST00000490546 NBPF15Q8N660 670 aa13.15□□□□□ -0.3
PUM1-210ENST00000490546 XAGE3Q8WTP9 111 aa13.15□□□□□ -0.3
PUM1-210ENST00000490546 PHAXQ9H814 394 aaKnown RBP13.15□□□□□ -0.3
PUM1-210ENST00000490546 LRRC4BQ9NT99 713 aa13.15□□□□□ -0.3
PUM1-210ENST00000490546 ZBTB1Q9Y2K1 713 aa13.15□□□□□ -0.3
PUM1-210ENST00000490546 RTCBQ9Y3I0 505 aaKnown RBP13.15□□□□□ -0.3
PUM1-210ENST00000490546 TAF1LQ8IZX4 1826 aa13.14□□□□□ -0.31
PUM1-210ENST00000490546 GNPATO15228 680 aa13.14□□□□□ -0.31
PUM1-210ENST00000490546 EZH2Q15910 746 aaKnown RBP13.14□□□□□ -0.31
PUM1-210ENST00000490546 ANKRD13DQ6ZTN6 518 aa13.14□□□□□ -0.31
PUM1-210ENST00000490546 RIC3Q7Z5B4 369 aa13.14□□□□□ -0.31
PUM1-210ENST00000490546 DZIP1LQ8IYY4 767 aaKnown RBP13.14□□□□□ -0.31
PUM1-210ENST00000490546 PROM2Q8N271 834 aa13.14□□□□□ -0.31
PUM1-210ENST00000490546 CAMKK2Q96RR4 588 aa13.14□□□□□ -0.31
PUM1-210ENST00000490546 MYH14Q7Z406 1995 aaKnown RBP13.14□□□□□ -0.31
PUM1-210ENST00000490546 CICQ96RK0 1608 aaPredicted RBP13.13□□□□□ -0.31
PUM1-210ENST00000490546 RPS6KA4O75676 772 aa13.13□□□□□ -0.31
PUM1-210ENST00000490546 PDE3AQ14432 1141 aa13.13□□□□□ -0.31
PUM1-210ENST00000490546 KSR2Q6VAB6 950 aa13.13□□□□□ -0.31
PUM1-210ENST00000490546 CLUAP1Q96AJ1 413 aa13.13□□□□□ -0.31
PUM1-210ENST00000490546 RNF123Q5XPI4 1314 aa13.13□□□□□ -0.31
PUM1-210ENST00000490546 RGPD3A6NKT7 1758 aaPredicted RBP13.12□□□□□ -0.31
PUM1-210ENST00000490546 RGPD4Q7Z3J3 1758 aa13.12□□□□□ -0.31
PUM1-210ENST00000490546 PI4KAP2A4QPH2 592 aa13.12□□□□□ -0.31
PUM1-210ENST00000490546 EIF5P55010 431 aaKnown RBP13.12□□□□□ -0.31
PUM1-210ENST00000490546 NEXNQ0ZGT2 675 aa13.12□□□□□ -0.31
PUM1-210ENST00000490546 TRAPPC3LQ5T215 181 aa13.12□□□□□ -0.31
PUM1-210ENST00000490546 SLC4A10Q6U841 1118 aa13.12□□□□□ -0.31
PUM1-210ENST00000490546 DEFB132Q7Z7B7 95 aa13.12□□□□□ -0.31
PUM1-210ENST00000490546 PI4KAP1Q8N8J0 262 aa13.12□□□□□ -0.31
PUM1-210ENST00000490546 TFCP2L1Q9NZI6 479 aa13.12□□□□□ -0.31
PUM1-210ENST00000490546 COL5A3P25940 1745 aaPredicted RBP13.12□□□□□ -0.31
PUM1-210ENST00000490546 ZPR1O75312 459 aa13.11□□□□□ -0.31
PUM1-210ENST00000490546 TRIM27P14373 513 aa13.11□□□□□ -0.31
PUM1-210ENST00000490546 DZIP3Q86Y13 1208 aaKnown RBP13.11□□□□□ -0.31
PUM1-210ENST00000490546 PLBD2Q8NHP8 589 aa13.11□□□□□ -0.31
PUM1-210ENST00000490546 DNAAF4Q8WXU2 420 aa13.11□□□□□ -0.31
PUM1-210ENST00000490546 UPF1Q92900 1129 aaKnown RBP eCLIP13.11□□□□□ -0.31
PUM1-210ENST00000490546 STK32BQ9NY57 414 aa13.11□□□□□ -0.31
PUM1-210ENST00000490546 MAP3K2Q9Y2U5 619 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms