RNA–Protein interactions for RNA: ENST00000488639.6

CEACAM1-212, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 3

Gene CEACAM1, Length 429 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-212ENST00000488639 ZBED9Q6R2W3 1325 aa15.22■□□□□ 0.03
CEACAM1-212ENST00000488639 PTCD1O75127 700 aaKnown RBP15.22■□□□□ 0.03
CEACAM1-212ENST00000488639 ATP6V1AP38606 617 aa15.22■□□□□ 0.03
CEACAM1-212ENST00000488639 HNRNPUQ00839 825 aaKnown RBP eCLIP15.22■□□□□ 0.03
CEACAM1-212ENST00000488639 GOLGA2Q08379 1002 aa15.22■□□□□ 0.03
CEACAM1-212ENST00000488639 ZNF496Q96IT1 587 aaPredicted RBP15.22■□□□□ 0.03
CEACAM1-212ENST00000488639 MYH16Q9H6N6 1097 aa15.22■□□□□ 0.03
CEACAM1-212ENST00000488639 C4BP0C0L5 1744 aa15.22■□□□□ 0.03
CEACAM1-212ENST00000488639 E9PSI1 815 aa15.21■□□□□ 0.03
CEACAM1-212ENST00000488639 HOXB7P09629 217 aa15.21■□□□□ 0.03
CEACAM1-212ENST00000488639 SNRPA1P09661 255 aaKnown RBP15.21■□□□□ 0.03
CEACAM1-212ENST00000488639 EIF4A1P60842 406 aaKnown RBP15.21■□□□□ 0.03
CEACAM1-212ENST00000488639 MBIPQ9NS73 344 aa15.21■□□□□ 0.03
CEACAM1-212ENST00000488639 SALL2Q9Y467 1007 aaPredicted RBP15.21■□□□□ 0.03
CEACAM1-212ENST00000488639 LAS1LQ9Y4W2 734 aaKnown RBP15.21■□□□□ 0.03
CEACAM1-212ENST00000488639 STARD3NLO95772 234 aa15.2■□□□□ 0.02
CEACAM1-212ENST00000488639 RC3H1Q5TC82 1133 aaKnown RBP15.2■□□□□ 0.02
CEACAM1-212ENST00000488639 NBPF14Q5TI25 921 aa15.19■□□□□ 0.02
CEACAM1-212ENST00000488639 SLC4A9Q96Q91 983 aa15.19■□□□□ 0.02
CEACAM1-212ENST00000488639 LRRC4BQ9NT99 713 aa15.19■□□□□ 0.02
CEACAM1-212ENST00000488639 MIS18AQ9NYP9 233 aa15.19■□□□□ 0.02
CEACAM1-212ENST00000488639 CNTNAP4Q9C0A0 1308 aa15.18■□□□□ 0.02
CEACAM1-212ENST00000488639 KCNQ3O43525 872 aa15.18■□□□□ 0.02
CEACAM1-212ENST00000488639 GIGYF1O75420 1035 aaPredicted RBP15.18■□□□□ 0.02
CEACAM1-212ENST00000488639 FANCIQ9NVI1 1328 aa15.17■□□□□ 0.02
CEACAM1-212ENST00000488639 UBR3Q6ZT12 1888 aa15.17■□□□□ 0.02
CEACAM1-212ENST00000488639 ITPK1Q13572 414 aa15.17■□□□□ 0.02
CEACAM1-212ENST00000488639 ERBB4Q15303 1308 aa15.17■□□□□ 0.02
CEACAM1-212ENST00000488639 CYP19A1P11511 503 aaPredicted RBP15.16■□□□□ 0.02
CEACAM1-212ENST00000488639 SLFN5Q08AF3 891 aa15.16■□□□□ 0.02
CEACAM1-212ENST00000488639 DNAJC10Q8IXB1 793 aa15.16■□□□□ 0.02
CEACAM1-212ENST00000488639 STK32BQ9NY57 414 aa15.16■□□□□ 0.02
CEACAM1-212ENST00000488639 CACNA1FO60840 1977 aa15.16■□□□□ 0.02
CEACAM1-212ENST00000488639 MYH14Q7Z406 1995 aaKnown RBP15.16■□□□□ 0.02
CEACAM1-212ENST00000488639 SENP3-EIF4A1A0A087X0R7 540 aa15.15■□□□□ 0.02
CEACAM1-212ENST00000488639 TRMT2AQ8IZ69 625 aaKnown RBP15.15■□□□□ 0.02
CEACAM1-212ENST00000488639 LINC00116Q8NCU8 138 aa15.15■□□□□ 0.02
CEACAM1-212ENST00000488639 FLAD1Q8NFF5 587 aa15.15■□□□□ 0.02
CEACAM1-212ENST00000488639 SLC15A2Q16348 729 aa15.14■□□□□ 0.01
CEACAM1-212ENST00000488639 AK7Q96M32 723 aa15.14■□□□□ 0.01
CEACAM1-212ENST00000488639 CCDC87Q9NVE4 849 aa15.14■□□□□ 0.01
CEACAM1-212ENST00000488639 TUBGCP6Q96RT7 1819 aa15.14■□□□□ 0.01
CEACAM1-212ENST00000488639 CT47B1P0C2W7 299 aaPredicted RBP15.13■□□□□ 0.01
CEACAM1-212ENST00000488639 SSFA2P28290 1259 aa15.13■□□□□ 0.01
CEACAM1-212ENST00000488639 CRKLP46109 303 aaKnown RBP15.13■□□□□ 0.01
CEACAM1-212ENST00000488639 TSR2Q969E8 191 aaKnown RBP15.13■□□□□ 0.01
CEACAM1-212ENST00000488639 KCNQ4P56696 695 aa15.12■□□□□ 0.01
CEACAM1-212ENST00000488639 DUSP27Q5VZP5 1158 aa15.12■□□□□ 0.01
CEACAM1-212ENST00000488639 ZNF428Q96B54 188 aa15.12■□□□□ 0.01
CEACAM1-212ENST00000488639 RTCBQ9Y3I0 505 aaKnown RBP15.12■□□□□ 0.01
CEACAM1-212ENST00000488639 USP16Q9Y5T5 823 aa15.12■□□□□ 0.01
CEACAM1-212ENST00000488639 RPS6KA4O75676 772 aa15.11■□□□□ 0.01
CEACAM1-212ENST00000488639 IL6STP40189 918 aaPredicted RBP15.11■□□□□ 0.01
CEACAM1-212ENST00000488639 TWISTNBQ3B726 338 aaPredicted RBP15.11■□□□□ 0.01
CEACAM1-212ENST00000488639 CHRDL2Q6WN34 429 aa15.11■□□□□ 0.01
CEACAM1-212ENST00000488639 TFCP2L1Q9NZI6 479 aa15.11■□□□□ 0.01
CEACAM1-212ENST00000488639 GNPATO15228 680 aa15.1■□□□□ 0.01
CEACAM1-212ENST00000488639 ZNF827Q17R98 1081 aa15.1■□□□□ 0.01
CEACAM1-212ENST00000488639 HDGFL1Q5TGJ6 251 aa15.1■□□□□ 0.01
CEACAM1-212ENST00000488639 CCDC30Q5VVM6 783 aa15.1■□□□□ 0.01
CEACAM1-212ENST00000488639 INTS5Q6P9B9 1019 aaKnown RBP15.1■□□□□ 0.01
CEACAM1-212ENST00000488639 NPM2Q86SE8 214 aaKnown RBP15.1■□□□□ 0.01
CEACAM1-212ENST00000488639 REM2Q8IYK8 340 aaPredicted RBP15.1■□□□□ 0.01
CEACAM1-212ENST00000488639 C8orf58Q8NAV2 365 aa15.1■□□□□ 0.01
CEACAM1-212ENST00000488639 ANO8Q9HCE9 1232 aaPredicted RBP15.1■□□□□ 0.01
CEACAM1-212ENST00000488639 A0A087WZG4 1122 aa15.09■□□□□ 0.01
CEACAM1-212ENST00000488639 PRAMEF22A3QJZ6 481 aa15.09■□□□□ 0.01
CEACAM1-212ENST00000488639 EXOSC9Q06265 439 aaKnown RBP15.09■□□□□ 0.01
CEACAM1-212ENST00000488639 CDCA7LQ96GN5 454 aa15.09■□□□□ 0.01
CEACAM1-212ENST00000488639 DBF4Q9UBU7 674 aaPredicted RBP15.09■□□□□ 0.01
CEACAM1-212ENST00000488639 C4AP0C0L4 1744 aa15.09■□□□□ 0.01
CEACAM1-212ENST00000488639 CASZ1Q86V15 1759 aa15.08■□□□□ 0.01
CEACAM1-212ENST00000488639 RGL2O15211 777 aa15.08■□□□□ 0
CEACAM1-212ENST00000488639 EIF5P55010 431 aaKnown RBP15.08■□□□□ 0
CEACAM1-212ENST00000488639 KRT24Q2M2I5 525 aa15.08■□□□□ 0
CEACAM1-212ENST00000488639 ZBTB1Q9Y2K1 713 aa15.08■□□□□ 0
CEACAM1-212ENST00000488639 COL15A1P39059 1388 aa15.08■□□□□ 0
CEACAM1-212ENST00000488639 VAMP4O75379 141 aa15.07■□□□□ 0
CEACAM1-212ENST00000488639 EIF2S2P20042 333 aaKnown RBP15.07■□□□□ 0
CEACAM1-212ENST00000488639 TRAPPC3LQ5T215 181 aa15.07■□□□□ 0
CEACAM1-212ENST00000488639 TSPYL6Q8N831 410 aa15.07■□□□□ 0
CEACAM1-212ENST00000488639 SLC16A10Q8TF71 515 aa15.07■□□□□ 0
CEACAM1-212ENST00000488639 DDX21Q9NR30 783 aaKnown RBP eCLIP15.07■□□□□ 0
CEACAM1-212ENST00000488639 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.06■□□□□ 0
CEACAM1-212ENST00000488639 A1BGP04217 495 aa15.06■□□□□ 0
CEACAM1-212ENST00000488639 STK31Q9BXU1 1019 aa15.06■□□□□ 0
CEACAM1-212ENST00000488639 HYPKQ9NX55 129 aa15.06■□□□□ 0
CEACAM1-212ENST00000488639 PNPLA7Q6ZV29 1317 aa15.06■□□□□ 0
CEACAM1-212ENST00000488639 SCN7AQ01118 1682 aa15.06■□□□□ 0
CEACAM1-212ENST00000488639 BCORQ6W2J9 1755 aa15.06■□□□□ 0
CEACAM1-212ENST00000488639 NBPF26B4DH59 902 aa15.05■□□□□ -0
CEACAM1-212ENST00000488639 ELL2O00472 640 aaPredicted RBP15.05■□□□□ -0
CEACAM1-212ENST00000488639 CANXP27824 592 aaKnown RBP15.05■□□□□ -0
CEACAM1-212ENST00000488639 NBPF10Q6P3W6 841 aaKnown RBP15.05■□□□□ -0
CEACAM1-212ENST00000488639 NBPF15Q8N660 670 aa15.05■□□□□ -0
CEACAM1-212ENST00000488639 SSUH2Q9Y2M2 353 aa15.05■□□□□ -0
CEACAM1-212ENST00000488639 COL24A1Q17RW2 1714 aa15.04■□□□□ -0
CEACAM1-212ENST00000488639 RFC4P35249 363 aa15.04■□□□□ -0
CEACAM1-212ENST00000488639 PDIA6Q15084 440 aa15.04■□□□□ -0
CEACAM1-212ENST00000488639 ALDH1L2Q3SY69 923 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms