RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 RTCBQ9Y3I0 505 aaKnown RBP17.1■□□□□ 0.33
TOP3A-205ENST00000477508 LAS1LQ9Y4W2 734 aaKnown RBP17.1■□□□□ 0.33
TOP3A-205ENST00000477508 TJP1Q07157 1748 aa17.1■□□□□ 0.33
TOP3A-205ENST00000477508 GNPATO15228 680 aa17.09■□□□□ 0.33
TOP3A-205ENST00000477508 RPS6KA4O75676 772 aa17.09■□□□□ 0.33
TOP3A-205ENST00000477508 CCDC87Q9NVE4 849 aa17.09■□□□□ 0.33
TOP3A-205ENST00000477508 ZNF853P0CG23 659 aa17.08■□□□□ 0.32
TOP3A-205ENST00000477508 PNPLA7Q6ZV29 1317 aa17.07■□□□□ 0.32
TOP3A-205ENST00000477508 GIGYF1O75420 1035 aaPredicted RBP17.07■□□□□ 0.32
TOP3A-205ENST00000477508 INTS5Q6P9B9 1019 aaKnown RBP17.07■□□□□ 0.32
TOP3A-205ENST00000477508 UBR3Q6ZT12 1888 aa17.06■□□□□ 0.32
TOP3A-205ENST00000477508 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.06■□□□□ 0.32
TOP3A-205ENST00000477508 TRAPPC3LQ5T215 181 aa17.06■□□□□ 0.32
TOP3A-205ENST00000477508 SALL2Q9Y467 1007 aaPredicted RBP17.06■□□□□ 0.32
TOP3A-205ENST00000477508 MYH14Q7Z406 1995 aaKnown RBP17.06■□□□□ 0.32
TOP3A-205ENST00000477508 SRCAPQ6ZRS2 3230 aa17.06■□□□□ 0.32
TOP3A-205ENST00000477508 COL23A1Q86Y22 540 aaPredicted RBP17.05■□□□□ 0.32
TOP3A-205ENST00000477508 CHMP4AQ9BY43 222 aa17.05■□□□□ 0.32
TOP3A-205ENST00000477508 MBIPQ9NS73 344 aa17.05■□□□□ 0.32
TOP3A-205ENST00000477508 USP16Q9Y5T5 823 aa17.05■□□□□ 0.32
TOP3A-205ENST00000477508 HOXB7P09629 217 aa17.04■□□□□ 0.32
TOP3A-205ENST00000477508 NPM2Q86SE8 214 aaKnown RBP17.04■□□□□ 0.32
TOP3A-205ENST00000477508 MTFR1LQ9H019 292 aa17.04■□□□□ 0.32
TOP3A-205ENST00000477508 TUBGCP6Q96RT7 1819 aa17.04■□□□□ 0.32
TOP3A-205ENST00000477508 CASZ1Q86V15 1759 aa17.04■□□□□ 0.32
TOP3A-205ENST00000477508 SENP3-EIF4A1A0A087X0R7 540 aa17.03■□□□□ 0.32
TOP3A-205ENST00000477508 PHF14O94880 888 aa17.03■□□□□ 0.32
TOP3A-205ENST00000477508 RFC4P35249 363 aa17.03■□□□□ 0.32
TOP3A-205ENST00000477508 IL6STP40189 918 aaPredicted RBP17.03■□□□□ 0.32
TOP3A-205ENST00000477508 SPON1Q9HCB6 807 aa17.03■□□□□ 0.32
TOP3A-205ENST00000477508 SOS1Q07889 1333 aaPredicted RBP17.02■□□□□ 0.32
TOP3A-205ENST00000477508 ERBB4Q15303 1308 aa17.02■□□□□ 0.32
TOP3A-205ENST00000477508 A0A087WZG4 1122 aa17.02■□□□□ 0.32
TOP3A-205ENST00000477508 MYH16Q9H6N6 1097 aa17.02■□□□□ 0.32
TOP3A-205ENST00000477508 ZBTB1Q9Y2K1 713 aa17.02■□□□□ 0.32
TOP3A-205ENST00000477508 ZNF521Q96K83 1311 aa17.01■□□□□ 0.31
TOP3A-205ENST00000477508 PRAMEF22A3QJZ6 481 aa17.01■□□□□ 0.31
TOP3A-205ENST00000477508 A1BGP04217 495 aa17.01■□□□□ 0.31
TOP3A-205ENST00000477508 CANXP27824 592 aaKnown RBP17.01■□□□□ 0.31
TOP3A-205ENST00000477508 EIF5P55010 431 aaKnown RBP17.01■□□□□ 0.31
TOP3A-205ENST00000477508 ARHGEF1Q92888 912 aaKnown RBP17.01■□□□□ 0.31
TOP3A-205ENST00000477508 PDGFDQ9GZP0 370 aaPredicted RBP17.01■□□□□ 0.31
TOP3A-205ENST00000477508 FOXD4L1Q9NU39 408 aa17.01■□□□□ 0.31
TOP3A-205ENST00000477508 LAMB4A4D0S4 1761 aa17■□□□□ 0.31
TOP3A-205ENST00000477508 ZBTB7AO95365 584 aa17■□□□□ 0.31
TOP3A-205ENST00000477508 GOLGA2Q08379 1002 aa17■□□□□ 0.31
TOP3A-205ENST00000477508 AMIGO3Q86WK7 504 aa17■□□□□ 0.31
TOP3A-205ENST00000477508 ZBTB22O15209 634 aa16.99■□□□□ 0.31
TOP3A-205ENST00000477508 DUSP27Q5VZP5 1158 aa16.99■□□□□ 0.31
TOP3A-205ENST00000477508 COL15A1P39059 1388 aa16.99■□□□□ 0.31
TOP3A-205ENST00000477508 ZPR1O75312 459 aa16.98■□□□□ 0.31
TOP3A-205ENST00000477508 NLGN1Q8N2Q7 840 aa16.98■□□□□ 0.31
TOP3A-205ENST00000477508 E9PSI1 815 aa16.97■□□□□ 0.31
TOP3A-205ENST00000477508 EIF2S2P20042 333 aaKnown RBP16.97■□□□□ 0.31
TOP3A-205ENST00000477508 POLD1P28340 1107 aa16.97■□□□□ 0.31
TOP3A-205ENST00000477508 SMIM5Q71RC9 77 aa16.97■□□□□ 0.31
TOP3A-205ENST00000477508 TSR2Q969E8 191 aaKnown RBP16.97■□□□□ 0.31
TOP3A-205ENST00000477508 NARFQ9UHQ1 456 aa16.97■□□□□ 0.31
TOP3A-205ENST00000477508 ATF5Q9Y2D1 282 aaPredicted RBP16.97■□□□□ 0.31
TOP3A-205ENST00000477508 USP42Q9H9J4 1324 aaKnown RBP16.96■□□□□ 0.31
TOP3A-205ENST00000477508 FANCIQ9NVI1 1328 aa16.96■□□□□ 0.31
TOP3A-205ENST00000477508 NBPF26B4DH59 902 aa16.96■□□□□ 0.31
TOP3A-205ENST00000477508 KRT24Q2M2I5 525 aa16.96■□□□□ 0.31
TOP3A-205ENST00000477508 HDGFL1Q5TGJ6 251 aa16.96■□□□□ 0.31
TOP3A-205ENST00000477508 NBPF10Q6P3W6 841 aaKnown RBP16.96■□□□□ 0.31
TOP3A-205ENST00000477508 NBPF15Q8N660 670 aa16.96■□□□□ 0.31
TOP3A-205ENST00000477508 RGL2O15211 777 aa16.95■□□□□ 0.3
TOP3A-205ENST00000477508 C8orf58Q8NAV2 365 aa16.95■□□□□ 0.3
TOP3A-205ENST00000477508 ZNF330Q9Y3S2 320 aaPredicted RBP16.95■□□□□ 0.3
TOP3A-205ENST00000477508 LRP5O75197 1615 aa16.95■□□□□ 0.3
TOP3A-205ENST00000477508 C4AP0C0L4 1744 aa16.94■□□□□ 0.3
TOP3A-205ENST00000477508 GYS1P13807 737 aa16.94■□□□□ 0.3
TOP3A-205ENST00000477508 HNRNPUQ00839 825 aaKnown RBP eCLIP16.94■□□□□ 0.3
TOP3A-205ENST00000477508 DDX21Q9NR30 783 aaKnown RBP eCLIP16.94■□□□□ 0.3
TOP3A-205ENST00000477508 DBF4Q9UBU7 674 aaPredicted RBP16.94■□□□□ 0.3
TOP3A-205ENST00000477508 COL24A1Q17RW2 1714 aa16.93■□□□□ 0.3
TOP3A-205ENST00000477508 PTGER2P43116 358 aa16.93■□□□□ 0.3
TOP3A-205ENST00000477508 TWISTNBQ3B726 338 aaPredicted RBP16.93■□□□□ 0.3
TOP3A-205ENST00000477508 CCDC30Q5VVM6 783 aa16.93■□□□□ 0.3
TOP3A-205ENST00000477508 DZIP3Q86Y13 1208 aaKnown RBP16.93■□□□□ 0.3
TOP3A-205ENST00000477508 ARXQ96QS3 562 aa16.93■□□□□ 0.3
TOP3A-205ENST00000477508 SGIP1Q9BQI5 828 aa16.93■□□□□ 0.3
TOP3A-205ENST00000477508 ELL2O00472 640 aaPredicted RBP16.92■□□□□ 0.3
TOP3A-205ENST00000477508 MYL6BP14649 208 aa16.92■□□□□ 0.3
TOP3A-205ENST00000477508 PIP4K2AP48426 406 aaPredicted RBP16.92■□□□□ 0.3
TOP3A-205ENST00000477508 SLFN5Q08AF3 891 aa16.92■□□□□ 0.3
TOP3A-205ENST00000477508 USPL1Q5W0Q7 1092 aa16.92■□□□□ 0.3
TOP3A-205ENST00000477508 SPINK5Q9NQ38 1064 aaPredicted RBP16.92■□□□□ 0.3
TOP3A-205ENST00000477508 HYPKQ9NX55 129 aa16.92■□□□□ 0.3
TOP3A-205ENST00000477508 PPP1R1BQ9UD71 204 aaPredicted RBP16.92■□□□□ 0.3
TOP3A-205ENST00000477508 SRP68Q9UHB9 627 aaKnown RBP16.92■□□□□ 0.3
TOP3A-205ENST00000477508 ZNF652Q9Y2D9 606 aa16.92■□□□□ 0.3
TOP3A-205ENST00000477508 PDIA6Q15084 440 aa16.91■□□□□ 0.3
TOP3A-205ENST00000477508 MSL1Q68DK7 614 aa16.91■□□□□ 0.3
TOP3A-205ENST00000477508 CLEC4GQ6UXB4 293 aa16.91■□□□□ 0.3
TOP3A-205ENST00000477508 KIF6Q6ZMV9 814 aa16.91■□□□□ 0.3
TOP3A-205ENST00000477508 NECTIN2Q92692 538 aa16.91■□□□□ 0.3
TOP3A-205ENST00000477508 TBC1D2BQ9UPU7 963 aa16.91■□□□□ 0.3
TOP3A-205ENST00000477508 ERVV-1B6SEH8 477 aa16.9■□□□□ 0.3
TOP3A-205ENST00000477508 EXOSC9Q06265 439 aaKnown RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms