RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 KCNQ4P56696 695 aa11.97□□□□□ -0.49
PGK1-204ENST00000477335 ITPK1Q13572 414 aa11.97□□□□□ -0.49
PGK1-204ENST00000477335 PROSER3Q2NL68 480 aa11.97□□□□□ -0.49
PGK1-204ENST00000477335 DNAJC10Q8IXB1 793 aa11.97□□□□□ -0.49
PGK1-204ENST00000477335 RBM42Q9BTD8 480 aaKnown RBP11.97□□□□□ -0.49
PGK1-204ENST00000477335 TNNQ9UQP3 1299 aa11.97□□□□□ -0.49
PGK1-204ENST00000477335 LAMB4A4D0S4 1761 aa11.97□□□□□ -0.49
PGK1-204ENST00000477335 KAT6BQ8WYB5 2073 aa11.96□□□□□ -0.49
PGK1-204ENST00000477335 PLIN1O60240 522 aa11.96□□□□□ -0.49
PGK1-204ENST00000477335 ANXA1P04083 346 aa11.96□□□□□ -0.49
PGK1-204ENST00000477335 HOXB7P09629 217 aa11.96□□□□□ -0.49
PGK1-204ENST00000477335 SNRPA1P09661 255 aaKnown RBP11.96□□□□□ -0.49
PGK1-204ENST00000477335 EIF2S2P20042 333 aaKnown RBP11.96□□□□□ -0.49
PGK1-204ENST00000477335 PIP4K2AP48426 406 aaPredicted RBP11.96□□□□□ -0.49
PGK1-204ENST00000477335 PDIA6Q15084 440 aa11.96□□□□□ -0.49
PGK1-204ENST00000477335 HDGFL1Q5TGJ6 251 aa11.96□□□□□ -0.49
PGK1-204ENST00000477335 G2E3Q7L622 706 aa11.96□□□□□ -0.49
PGK1-204ENST00000477335 CICQ96RK0 1608 aaPredicted RBP11.96□□□□□ -0.5
PGK1-204ENST00000477335 LY75O60449 1722 aa11.95□□□□□ -0.5
PGK1-204ENST00000477335 SOS1Q07889 1333 aaPredicted RBP11.95□□□□□ -0.5
PGK1-204ENST00000477335 LOC102724428A0A0B4J2F2 783 aa11.95□□□□□ -0.5
PGK1-204ENST00000477335 NBPF26B4DH59 902 aa11.95□□□□□ -0.5
PGK1-204ENST00000477335 SIK1P57059 783 aa11.95□□□□□ -0.5
PGK1-204ENST00000477335 ALDH1L2Q3SY69 923 aa11.95□□□□□ -0.5
PGK1-204ENST00000477335 NBPF14Q5TI25 921 aa11.95□□□□□ -0.5
PGK1-204ENST00000477335 NBPF10Q6P3W6 841 aaKnown RBP11.95□□□□□ -0.5
PGK1-204ENST00000477335 LRP10Q7Z4F1 713 aa11.95□□□□□ -0.5
PGK1-204ENST00000477335 NBPF15Q8N660 670 aa11.95□□□□□ -0.5
PGK1-204ENST00000477335 SMC4Q9NTJ3 1288 aa11.95□□□□□ -0.5
PGK1-204ENST00000477335 CHPF2Q9P2E5 772 aa11.95□□□□□ -0.5
PGK1-204ENST00000477335 CYP19A1P11511 503 aaPredicted RBP11.94□□□□□ -0.5
PGK1-204ENST00000477335 RRP1P56182 461 aaKnown RBP11.94□□□□□ -0.5
PGK1-204ENST00000477335 SMARCC1Q92922 1105 aaPredicted RBP11.94□□□□□ -0.5
PGK1-204ENST00000477335 A1BGP04217 495 aa11.93□□□□□ -0.5
PGK1-204ENST00000477335 BRPF1P55201 1214 aaPredicted RBP11.93□□□□□ -0.5
PGK1-204ENST00000477335 MKRN4PQ13434 485 aaPredicted RBP11.93□□□□□ -0.5
PGK1-204ENST00000477335 C20orf194Q5TEA3 1177 aa11.93□□□□□ -0.5
PGK1-204ENST00000477335 CCDC30Q5VVM6 783 aa11.93□□□□□ -0.5
PGK1-204ENST00000477335 VSIG10Q8N0Z9 540 aa11.93□□□□□ -0.5
PGK1-204ENST00000477335 PROM2Q8N271 834 aa11.93□□□□□ -0.5
PGK1-204ENST00000477335 LINC00116Q8NCU8 138 aa11.93□□□□□ -0.5
PGK1-204ENST00000477335 ZNF428Q96B54 188 aa11.93□□□□□ -0.5
PGK1-204ENST00000477335 LRRC4BQ9NT99 713 aa11.93□□□□□ -0.5
PGK1-204ENST00000477335 COL5A3P25940 1745 aaPredicted RBP11.93□□□□□ -0.5
PGK1-204ENST00000477335 ZNF831Q5JPB2 1677 aa11.93□□□□□ -0.5
PGK1-204ENST00000477335 RREB1Q92766 1687 aa11.93□□□□□ -0.5
PGK1-204ENST00000477335 ATP6V1AP38606 617 aa11.92□□□□□ -0.5
PGK1-204ENST00000477335 PHAXQ9H814 394 aaKnown RBP11.92□□□□□ -0.5
PGK1-204ENST00000477335 NOB1Q9ULX3 412 aaKnown RBP11.92□□□□□ -0.5
PGK1-204ENST00000477335 IRX6P78412 446 aaPredicted RBP11.91□□□□□ -0.5
PGK1-204ENST00000477335 INTS5Q6P9B9 1019 aaKnown RBP11.91□□□□□ -0.5
PGK1-204ENST00000477335 APBA3O96018 575 aa11.9□□□□□ -0.5
PGK1-204ENST00000477335 RLBP1P12271 317 aa11.9□□□□□ -0.5
PGK1-204ENST00000477335 TRIM27P14373 513 aa11.9□□□□□ -0.5
PGK1-204ENST00000477335 MYL6BP14649 208 aa11.9□□□□□ -0.5
PGK1-204ENST00000477335 SMIM5Q71RC9 77 aa11.9□□□□□ -0.5
PGK1-204ENST00000477335 AMIGO3Q86WK7 504 aa11.9□□□□□ -0.5
PGK1-204ENST00000477335 FRAT1Q92837 279 aaPredicted RBP11.9□□□□□ -0.5
PGK1-204ENST00000477335 DDX21Q9NR30 783 aaKnown RBP eCLIP11.9□□□□□ -0.5
PGK1-204ENST00000477335 CCNL1Q9UK58 526 aaPredicted RBP11.9□□□□□ -0.5
PGK1-204ENST00000477335 ZBTB1Q9Y2K1 713 aa11.9□□□□□ -0.5
PGK1-204ENST00000477335 MYH14Q7Z406 1995 aaKnown RBP11.89□□□□□ -0.51
PGK1-204ENST00000477335 CRKLP46109 303 aaKnown RBP11.89□□□□□ -0.51
PGK1-204ENST00000477335 FLIIQ13045 1269 aa11.89□□□□□ -0.51
PGK1-204ENST00000477335 TAF1LQ8IZX4 1826 aa11.88□□□□□ -0.51
PGK1-204ENST00000477335 TXNRD1Q16881 649 aa11.88□□□□□ -0.51
PGK1-204ENST00000477335 PANK1Q8TE04 598 aa11.88□□□□□ -0.51
PGK1-204ENST00000477335 STK31Q9BXU1 1019 aa11.88□□□□□ -0.51
PGK1-204ENST00000477335 TEX13AQ9BXU3 409 aaPredicted RBP11.88□□□□□ -0.51
PGK1-204ENST00000477335 CCDC87Q9NVE4 849 aa11.88□□□□□ -0.51
PGK1-204ENST00000477335 DBF4Q9UBU7 674 aaPredicted RBP11.88□□□□□ -0.51
PGK1-204ENST00000477335 ADCY9O60503 1353 aa11.88□□□□□ -0.51
PGK1-204ENST00000477335 ERBB4Q15303 1308 aa11.87□□□□□ -0.51
PGK1-204ENST00000477335 KIF16BQ96L93 1317 aa11.87□□□□□ -0.51
PGK1-204ENST00000477335 C4BP0C0L5 1744 aa11.87□□□□□ -0.51
PGK1-204ENST00000477335 F6X3S4 739 aa11.87□□□□□ -0.51
PGK1-204ENST00000477335 PLSCR1O15162 318 aa11.87□□□□□ -0.51
PGK1-204ENST00000477335 STARD3NLO95772 234 aa11.87□□□□□ -0.51
PGK1-204ENST00000477335 CANXP27824 592 aaKnown RBP11.87□□□□□ -0.51
PGK1-204ENST00000477335 ZKSCAN2Q63HK3 967 aa11.87□□□□□ -0.51
PGK1-204ENST00000477335 ATF7IPQ6VMQ6 1270 aa11.87□□□□□ -0.51
PGK1-204ENST00000477335 TTLL7Q6ZT98 887 aa11.87□□□□□ -0.51
PGK1-204ENST00000477335 ILDR2Q71H61 639 aa11.87□□□□□ -0.51
PGK1-204ENST00000477335 XAGE3Q8WTP9 111 aa11.87□□□□□ -0.51
PGK1-204ENST00000477335 CLUAP1Q96AJ1 413 aa11.87□□□□□ -0.51
PGK1-204ENST00000477335 CAMKK2Q96RR4 588 aa11.87□□□□□ -0.51
PGK1-204ENST00000477335 RGPD3A6NKT7 1758 aaPredicted RBP11.87□□□□□ -0.51
PGK1-204ENST00000477335 RGPD4Q7Z3J3 1758 aa11.87□□□□□ -0.51
PGK1-204ENST00000477335 ABCC4O15439 1325 aa11.86□□□□□ -0.51
PGK1-204ENST00000477335 CNTNAP4Q9C0A0 1308 aa11.86□□□□□ -0.51
PGK1-204ENST00000477335 EN1Q05925 392 aaPredicted RBP11.86□□□□□ -0.51
PGK1-204ENST00000477335 AIMP1Q12904 312 aaKnown RBP11.86□□□□□ -0.51
PGK1-204ENST00000477335 EZH2Q15910 746 aaKnown RBP11.86□□□□□ -0.51
PGK1-204ENST00000477335 COPS6Q7L5N1 327 aa11.86□□□□□ -0.51
PGK1-204ENST00000477335 DEFB132Q7Z7B7 95 aa11.86□□□□□ -0.51
PGK1-204ENST00000477335 HYPKQ9NX55 129 aa11.86□□□□□ -0.51
PGK1-204ENST00000477335 EIF5P55010 431 aaKnown RBP11.85□□□□□ -0.51
PGK1-204ENST00000477335 ZNF827Q17R98 1081 aa11.85□□□□□ -0.51
PGK1-204ENST00000477335 SLC27A3Q5K4L6 730 aa11.85□□□□□ -0.51
PGK1-204ENST00000477335 ARHGAP45Q92619 1136 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms