RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 DLG5Q8TDM6 1919 aa16.52■□□□□ 0.23
NPHP4-207ENST00000470763 PTGS1P23219 599 aa16.52■□□□□ 0.23
NPHP4-207ENST00000470763 PDE4CQ08493 712 aa16.52■□□□□ 0.23
NPHP4-207ENST00000470763 C16orf45Q96MC5 204 aaPredicted RBP16.52■□□□□ 0.23
NPHP4-207ENST00000470763 PRAM1Q96QH2 718 aa16.52■□□□□ 0.23
NPHP4-207ENST00000470763 UBE2HP62256 183 aa16.51■□□□□ 0.23
NPHP4-207ENST00000470763 IL25Q9H293 177 aa16.51■□□□□ 0.23
NPHP4-207ENST00000470763 VGFO15240 615 aaPredicted RBP16.5■□□□□ 0.23
NPHP4-207ENST00000470763 CHMLP26374 656 aa16.5■□□□□ 0.23
NPHP4-207ENST00000470763 TMEM87AQ8NBN3 555 aa16.5■□□□□ 0.23
NPHP4-207ENST00000470763 FUCA2Q9BTY2 467 aa16.5■□□□□ 0.23
NPHP4-207ENST00000470763 OSBPL3Q9H4L5 887 aa16.5■□□□□ 0.23
NPHP4-207ENST00000470763 CDC42BPGQ6DT37 1551 aa16.5■□□□□ 0.23
NPHP4-207ENST00000470763 TOM1O60784 492 aa16.5■□□□□ 0.23
NPHP4-207ENST00000470763 ZSCAN22P10073 491 aaPredicted RBP16.5■□□□□ 0.23
NPHP4-207ENST00000470763 KCNA6P17658 529 aa16.5■□□□□ 0.23
NPHP4-207ENST00000470763 UNC5CLQ8IV45 518 aa16.5■□□□□ 0.23
NPHP4-207ENST00000470763 RPGRIP1LQ68CZ1 1315 aa16.5■□□□□ 0.23
NPHP4-207ENST00000470763 MAP2P11137 1827 aaKnown RBP16.49■□□□□ 0.23
NPHP4-207ENST00000470763 HMMRO75330 724 aa16.49■□□□□ 0.23
NPHP4-207ENST00000470763 PIP4K2BP78356 416 aa16.49■□□□□ 0.23
NPHP4-207ENST00000470763 FEZ1Q99689 392 aa16.49■□□□□ 0.23
NPHP4-207ENST00000470763 OGFRQ9NZT2 677 aa16.49■□□□□ 0.23
NPHP4-207ENST00000470763 F6X3S4 739 aa16.49■□□□□ 0.23
NPHP4-207ENST00000470763 ANAPC15P60006 121 aa16.49■□□□□ 0.23
NPHP4-207ENST00000470763 LRMPQ12912 555 aa16.49■□□□□ 0.23
NPHP4-207ENST00000470763 TMEM51Q9NW97 253 aa16.49■□□□□ 0.23
NPHP4-207ENST00000470763 CHMP3Q9Y3E7 222 aa16.49■□□□□ 0.23
NPHP4-207ENST00000470763 ADAMTS13Q76LX8 1427 aa16.48■□□□□ 0.23
NPHP4-207ENST00000470763 SYT1P21579 422 aa16.48■□□□□ 0.23
NPHP4-207ENST00000470763 HDGFP51858 240 aaKnown RBP16.48■□□□□ 0.23
NPHP4-207ENST00000470763 VGLL3A8MV65 326 aa16.48■□□□□ 0.23
NPHP4-207ENST00000470763 GOLGA6L6A8MZA4 724 aa16.48■□□□□ 0.23
NPHP4-207ENST00000470763 STX6O43752 255 aa16.48■□□□□ 0.23
NPHP4-207ENST00000470763 IL13P35225 146 aa16.48■□□□□ 0.23
NPHP4-207ENST00000470763 CTNNA3Q9UI47 895 aa16.48■□□□□ 0.23
NPHP4-207ENST00000470763 NWD1Q149M9 1564 aa16.48■□□□□ 0.23
NPHP4-207ENST00000470763 LMOD3Q0VAK6 560 aa16.47■□□□□ 0.23
NPHP4-207ENST00000470763 RBM33Q96EV2 1170 aaKnown RBP16.47■□□□□ 0.23
NPHP4-207ENST00000470763 DNM1Q05193 864 aaKnown RBP16.47■□□□□ 0.23
NPHP4-207ENST00000470763 CDK19Q9BWU1 502 aa16.47■□□□□ 0.23
NPHP4-207ENST00000470763 KIF20BQ96Q89 1820 aa16.47■□□□□ 0.23
NPHP4-207ENST00000470763 F13A1P00488 732 aa16.46■□□□□ 0.23
NPHP4-207ENST00000470763 ZRANB1Q9UGI0 708 aa16.46■□□□□ 0.23
NPHP4-207ENST00000470763 TMEM94Q12767 1356 aa16.46■□□□□ 0.23
NPHP4-207ENST00000470763 MAP4K4O95819 1239 aaPredicted RBP16.46■□□□□ 0.22
NPHP4-207ENST00000470763 SLC4A2P04920 1241 aa16.46■□□□□ 0.22
NPHP4-207ENST00000470763 CCDC186Q7Z3E2 898 aa16.46■□□□□ 0.22
NPHP4-207ENST00000470763 CHD2O14647 1828 aaKnown RBP16.45■□□□□ 0.22
NPHP4-207ENST00000470763 TPM3P06753 285 aa16.45■□□□□ 0.22
NPHP4-207ENST00000470763 LUZP1Q86V48 1076 aa16.45■□□□□ 0.22
NPHP4-207ENST00000470763 DRC7Q8IY82 874 aa16.45■□□□□ 0.22
NPHP4-207ENST00000470763 YTHDC2Q9H6S0 1430 aaKnown RBP16.45■□□□□ 0.22
NPHP4-207ENST00000470763 NRBP1Q9UHY1 535 aa16.45■□□□□ 0.22
NPHP4-207ENST00000470763 TBX22Q9Y458 520 aa16.45■□□□□ 0.22
NPHP4-207ENST00000470763 RRS1Q15050 365 aaKnown RBP16.45■□□□□ 0.22
NPHP4-207ENST00000470763 CAMK4Q16566 473 aa16.45■□□□□ 0.22
NPHP4-207ENST00000470763 MCM10Q7L590 875 aa16.45■□□□□ 0.22
NPHP4-207ENST00000470763 CPA1P15085 419 aa16.44■□□□□ 0.22
NPHP4-207ENST00000470763 LRRCC1Q9C099 1032 aa16.44■□□□□ 0.22
NPHP4-207ENST00000470763 HSPA1LP34931 641 aa16.44■□□□□ 0.22
NPHP4-207ENST00000470763 SMC3Q9UQE7 1217 aa16.44■□□□□ 0.22
NPHP4-207ENST00000470763 SALL3Q9BXA9 1300 aa16.44■□□□□ 0.22
NPHP4-207ENST00000470763 CCDC192P0DO97 292 aa16.44■□□□□ 0.22
NPHP4-207ENST00000470763 TNNT1P13805 278 aa16.44■□□□□ 0.22
NPHP4-207ENST00000470763 AK2P54819 239 aa16.44■□□□□ 0.22
NPHP4-207ENST00000470763 G2E3Q7L622 706 aa16.44■□□□□ 0.22
NPHP4-207ENST00000470763 NRXN3Q9Y4C0 1643 aa16.43■□□□□ 0.22
NPHP4-207ENST00000470763 SLFN14P0C7P3 912 aa16.43■□□□□ 0.22
NPHP4-207ENST00000470763 ZNF592Q92610 1267 aa16.43■□□□□ 0.22
NPHP4-207ENST00000470763 TAF3Q5VWG9 929 aa16.43■□□□□ 0.22
NPHP4-207ENST00000470763 MIS18AQ9NYP9 233 aa16.43■□□□□ 0.22
NPHP4-207ENST00000470763 NEXMIFQ5QGS0 1516 aa16.43■□□□□ 0.22
NPHP4-207ENST00000470763 SMTNL1A8MU46 457 aa16.42■□□□□ 0.22
NPHP4-207ENST00000470763 LARGE1O95461 756 aa16.42■□□□□ 0.22
NPHP4-207ENST00000470763 PROSER2Q86WR7 435 aaPredicted RBP16.42■□□□□ 0.22
NPHP4-207ENST00000470763 DDX41Q9UJV9 622 aaKnown RBP16.42■□□□□ 0.22
NPHP4-207ENST00000470763 PNMA6EA0A0J9YXQ4 647 aa16.42■□□□□ 0.22
NPHP4-207ENST00000470763 HSPA4P34932 840 aa16.42■□□□□ 0.22
NPHP4-207ENST00000470763 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.42■□□□□ 0.22
NPHP4-207ENST00000470763 V9GYY5 206 aaPredicted RBP16.42■□□□□ 0.22
NPHP4-207ENST00000470763 RUFY3Q7L099 469 aa16.42■□□□□ 0.22
NPHP4-207ENST00000470763 NME9Q86XW9 330 aa16.42■□□□□ 0.22
NPHP4-207ENST00000470763 AEBP1Q8IUX7 1158 aa16.42■□□□□ 0.22
NPHP4-207ENST00000470763 PTPRCP08575 1304 aa16.42■□□□□ 0.22
NPHP4-207ENST00000470763 VPS37CA5D8V6 355 aaPredicted RBP16.41■□□□□ 0.22
NPHP4-207ENST00000470763 GABPB1Q06547 395 aaPredicted RBP16.41■□□□□ 0.22
NPHP4-207ENST00000470763 MAPK8IP2Q13387 824 aaPredicted RBP16.41■□□□□ 0.22
NPHP4-207ENST00000470763 CKAP2LQ8IYA6 745 aa16.41■□□□□ 0.22
NPHP4-207ENST00000470763 CCDC112Q8NEF3 446 aa16.41■□□□□ 0.22
NPHP4-207ENST00000470763 IL1RAPL2Q9NP60 686 aa16.41■□□□□ 0.22
NPHP4-207ENST00000470763 KIAA0232Q92628 1395 aa16.41■□□□□ 0.22
NPHP4-207ENST00000470763 DIP2AQ14689 1571 aa16.41■□□□□ 0.22
NPHP4-207ENST00000470763 CCDC83Q8IWF9 413 aa16.41■□□□□ 0.22
NPHP4-207ENST00000470763 FAM200AQ8TCP9 573 aa16.41■□□□□ 0.22
NPHP4-207ENST00000470763 KCNJ4P48050 445 aa16.4■□□□□ 0.22
NPHP4-207ENST00000470763 RASEFQ8IZ41 740 aa16.4■□□□□ 0.22
NPHP4-207ENST00000470763 ATP6V1DQ9Y5K8 247 aa16.4■□□□□ 0.22
NPHP4-207ENST00000470763 TUBGCP6Q96RT7 1819 aa16.4■□□□□ 0.22
NPHP4-207ENST00000470763 SSH2Q76I76 1423 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms