RNA–Protein interactions for RNA: ENST00000466832.5

TRA2B-209, Transcript of transformer 2 beta homolog, human

TSL 2

Gene TRA2B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2B-209	ENST00000466832	CARD14	Q9BXL6	1004 aa		7.5	□□□□□ -1.21
TRA2B-209	ENST00000466832	OAT	P04181	439 aa		7.5	□□□□□ -1.21
TRA2B-209	ENST00000466832	MYSM1	Q5VVJ2	828 aa		7.5	□□□□□ -1.21
TRA2B-209	ENST00000466832	DUSP27	Q5VZP5	1158 aa		7.5	□□□□□ -1.21
TRA2B-209	ENST00000466832	POLR3E	Q9NVU0	708 aa		7.5	□□□□□ -1.21
TRA2B-209	ENST00000466832	ITSN1	Q15811	1721 aa		7.5	□□□□□ -1.21
TRA2B-209	ENST00000466832	NPHP3	Q7Z494	1330 aa		7.49	□□□□□ -1.21
TRA2B-209	ENST00000466832	IRX6	P78412	446 aa	Predicted RBP	7.49	□□□□□ -1.21
TRA2B-209	ENST00000466832	B4GALNT3	Q6L9W6	998 aa		7.49	□□□□□ -1.21
TRA2B-209	ENST00000466832	METTL3	Q86U44	580 aa	Known RBP	7.49	□□□□□ -1.21
TRA2B-209	ENST00000466832	KCTD17	Q8N5Z5	321 aa		7.49	□□□□□ -1.21
TRA2B-209	ENST00000466832	CFAP53	Q96M91	514 aa		7.49	□□□□□ -1.21
TRA2B-209	ENST00000466832	COG6	Q9Y2V7	657 aa		7.49	□□□□□ -1.21
TRA2B-209	ENST00000466832	TOPAZ1	Q8N9V7	1692 aa		7.49	□□□□□ -1.21
TRA2B-209	ENST00000466832	CT47B1	P0C2W7	299 aa	Predicted RBP	7.49	□□□□□ -1.21
TRA2B-209	ENST00000466832	CLK2	P49760	499 aa	Known RBP	7.49	□□□□□ -1.21
TRA2B-209	ENST00000466832	NALCN	Q8IZF0	1738 aa		7.48	□□□□□ -1.21
TRA2B-209	ENST00000466832	IDI1	Q13907	227 aa		7.48	□□□□□ -1.21
TRA2B-209	ENST00000466832	TYW1B	Q6NUM6	668 aa		7.48	□□□□□ -1.21
TRA2B-209	ENST00000466832	WDR63	Q8IWG1	891 aa		7.48	□□□□□ -1.21
TRA2B-209	ENST00000466832	SLAIN1	Q8ND83	568 aa		7.48	□□□□□ -1.21
TRA2B-209	ENST00000466832	AMOTL2	Q9Y2J4	779 aa		7.48	□□□□□ -1.21
TRA2B-209	ENST00000466832	CD163L1	Q9NR16	1453 aa		7.48	□□□□□ -1.21
TRA2B-209	ENST00000466832	PDE4DIP	Q5VU43	2346 aa		7.48	□□□□□ -1.21
TRA2B-209	ENST00000466832	FSTL1	Q12841	308 aa		7.48	□□□□□ -1.21
TRA2B-209	ENST00000466832	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	7.48	□□□□□ -1.21
TRA2B-209	ENST00000466832	RBM46	Q8TBY0	533 aa	Known RBP	7.48	□□□□□ -1.21
TRA2B-209	ENST00000466832	ZNF526	Q8TF50	670 aa	Predicted RBP	7.48	□□□□□ -1.21
TRA2B-209	ENST00000466832	PLSCR2	Q9NRY7	297 aa		7.48	□□□□□ -1.21
TRA2B-209	ENST00000466832	XRN1	Q8IZH2	1706 aa	Known RBP	7.47	□□□□□ -1.21
TRA2B-209	ENST00000466832	DIXDC1	Q155Q3	683 aa		7.47	□□□□□ -1.21
TRA2B-209	ENST00000466832	TSR1	Q2NL82	804 aa	Known RBP	7.47	□□□□□ -1.21
TRA2B-209	ENST00000466832	FAM182B	Q5T319	152 aa		7.47	□□□□□ -1.21
TRA2B-209	ENST00000466832	FBXW7	Q969H0	707 aa		7.47	□□□□□ -1.21
TRA2B-209	ENST00000466832	RUNDC1	Q96C34	613 aa		7.47	□□□□□ -1.21
TRA2B-209	ENST00000466832	ABHD8	Q96I13	439 aa		7.47	□□□□□ -1.21
TRA2B-209	ENST00000466832	PCDHGA10	Q9Y5H3	936 aa		7.47	□□□□□ -1.21
TRA2B-209	ENST00000466832	RIMS2	Q9UQ26	1411 aa		7.47	□□□□□ -1.21
TRA2B-209	ENST00000466832	PXDN	Q92626	1479 aa		7.47	□□□□□ -1.21
TRA2B-209	ENST00000466832	MORC1	Q86VD1	984 aa		7.47	□□□□□ -1.21
TRA2B-209	ENST00000466832	ADAMTS13	Q76LX8	1427 aa		7.47	□□□□□ -1.21
TRA2B-209	ENST00000466832	RFC5	P40937	340 aa		7.46	□□□□□ -1.22
TRA2B-209	ENST00000466832	PDE3A	Q14432	1141 aa		7.46	□□□□□ -1.22
TRA2B-209	ENST00000466832	CENPQ	Q7L2Z9	268 aa	Predicted RBP	7.46	□□□□□ -1.22
TRA2B-209	ENST00000466832	PNN	Q9H307	717 aa	Known RBP	7.46	□□□□□ -1.22
TRA2B-209	ENST00000466832	TERF2IP	Q9NYB0	399 aa		7.46	□□□□□ -1.22
TRA2B-209	ENST00000466832	USP54	Q70EL1	1684 aa		7.46	□□□□□ -1.22
TRA2B-209	ENST00000466832	PCNT	O95613	3336 aa		7.46	□□□□□ -1.22
TRA2B-209	ENST00000466832	NRAP	Q86VF7	1730 aa		7.46	□□□□□ -1.22
TRA2B-209	ENST00000466832	PITPNM2	Q9BZ72	1349 aa		7.46	□□□□□ -1.22
TRA2B-209	ENST00000466832	TMEM259	Q4ZIN3	620 aa		7.46	□□□□□ -1.22
TRA2B-209	ENST00000466832	PXYLP1	Q8TE99	480 aa		7.46	□□□□□ -1.22
TRA2B-209	ENST00000466832	TRAK1	Q9UPV9	953 aa		7.46	□□□□□ -1.22
TRA2B-209	ENST00000466832	ADGRG1	Q9Y653	693 aa		7.46	□□□□□ -1.22
TRA2B-209	ENST00000466832		A0A1W2PP64	1363 aa		7.45	□□□□□ -1.22
TRA2B-209	ENST00000466832	IL16	Q14005	1332 aa		7.45	□□□□□ -1.22
TRA2B-209	ENST00000466832	KDM2B	Q8NHM5	1336 aa		7.45	□□□□□ -1.22
TRA2B-209	ENST00000466832	PLSCR1	O15162	318 aa		7.45	□□□□□ -1.22
TRA2B-209	ENST00000466832	CDCA7L	Q96GN5	454 aa		7.45	□□□□□ -1.22
TRA2B-209	ENST00000466832	EXOC6	Q8TAG9	804 aa		7.44	□□□□□ -1.22
TRA2B-209	ENST00000466832	TBC1D2	Q9BYX2	928 aa		7.44	□□□□□ -1.22
TRA2B-209	ENST00000466832	SNRK	Q9NRH2	765 aa		7.44	□□□□□ -1.22
TRA2B-209	ENST00000466832	EDC4	Q6P2E9	1401 aa	Known RBP	7.44	□□□□□ -1.22
TRA2B-209	ENST00000466832	RBM27	Q9P2N5	1060 aa	Known RBP	7.44	□□□□□ -1.22
TRA2B-209	ENST00000466832	ZNF330	Q9Y3S2	320 aa	Predicted RBP	7.44	□□□□□ -1.22
TRA2B-209	ENST00000466832	CPSF1	Q10570	1443 aa	Known RBP	7.44	□□□□□ -1.22
TRA2B-209	ENST00000466832	PPP2R2D	Q66LE6	453 aa		7.43	□□□□□ -1.22
TRA2B-209	ENST00000466832	PADI6	Q6TGC4	694 aa		7.43	□□□□□ -1.22
TRA2B-209	ENST00000466832	STK32B	Q9NY57	414 aa		7.43	□□□□□ -1.22
TRA2B-209	ENST00000466832	PPIP5K1	Q6PFW1	1433 aa		7.43	□□□□□ -1.22
TRA2B-209	ENST00000466832	SEC24B	O95487	1268 aa		7.43	□□□□□ -1.22
TRA2B-209	ENST00000466832	NLRP7	Q8WX94	980 aa		7.43	□□□□□ -1.22
TRA2B-209	ENST00000466832	PDGFD	Q9GZP0	370 aa	Predicted RBP	7.43	□□□□□ -1.22
TRA2B-209	ENST00000466832	PTPRU	Q92729	1446 aa		7.43	□□□□□ -1.22
TRA2B-209	ENST00000466832	ANP32A	P39687	249 aa	Known RBP	7.42	□□□□□ -1.22
TRA2B-209	ENST00000466832	PRPF38B	Q5VTL8	546 aa	Known RBP	7.42	□□□□□ -1.22
TRA2B-209	ENST00000466832	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	7.42	□□□□□ -1.22
TRA2B-209	ENST00000466832	TTC13	Q8NBP0	860 aa		7.42	□□□□□ -1.22
TRA2B-209	ENST00000466832	ORAI2	Q96SN7	254 aa		7.42	□□□□□ -1.22
TRA2B-209	ENST00000466832	SPATA31A5	Q5VU36	1347 aa		7.42	□□□□□ -1.22
TRA2B-209	ENST00000466832	SPATA31A7	Q8IWB4	1347 aa		7.42	□□□□□ -1.22
TRA2B-209	ENST00000466832	YBX3	P16989	372 aa	Known RBP eCLIP	7.42	□□□□□ -1.22	3e-7	■■□□□ 12.8
TRA2B-209	ENST00000466832	WWC1	Q8IX03	1113 aa		7.42	□□□□□ -1.22
TRA2B-209	ENST00000466832	CRBN	Q96SW2	442 aa		7.42	□□□□□ -1.22
TRA2B-209	ENST00000466832	SLC12A5	Q9H2X9	1139 aa		7.42	□□□□□ -1.22
TRA2B-209	ENST00000466832	MYH16	Q9H6N6	1097 aa		7.42	□□□□□ -1.22
TRA2B-209	ENST00000466832	DLL1	O00548	723 aa		7.41	□□□□□ -1.22
TRA2B-209	ENST00000466832	APAF1	O14727	1248 aa		7.41	□□□□□ -1.22
TRA2B-209	ENST00000466832	HTRA3	P83110	453 aa		7.41	□□□□□ -1.22
TRA2B-209	ENST00000466832	CNGB1	Q14028	1251 aa	Predicted RBP	7.41	□□□□□ -1.22
TRA2B-209	ENST00000466832	C3orf67	Q6ZVT6	689 aa		7.41	□□□□□ -1.22
TRA2B-209	ENST00000466832	RETREG2	Q8NC44	543 aa		7.41	□□□□□ -1.22
TRA2B-209	ENST00000466832	COLQ	Q9Y215	455 aa	Predicted RBP	7.41	□□□□□ -1.22
TRA2B-209	ENST00000466832	MAP2	P11137	1827 aa	Known RBP	7.41	□□□□□ -1.22
TRA2B-209	ENST00000466832	TUSC1	Q2TAM9	212 aa		7.41	□□□□□ -1.22
TRA2B-209	ENST00000466832	TMEM132E	Q6IEE7	984 aa		7.41	□□□□□ -1.22
TRA2B-209	ENST00000466832	ZNF428	Q96B54	188 aa		7.41	□□□□□ -1.22
TRA2B-209	ENST00000466832	GCC1	Q96CN9	775 aa		7.41	□□□□□ -1.22
TRA2B-209	ENST00000466832	CTCF	P49711	727 aa	Predicted RBP	7.4	□□□□□ -1.22
TRA2B-209	ENST00000466832	POLD1	P28340	1107 aa		7.4	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms