RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 CCDC146Q8IYE0 955 aa10.71□□□□□ -0.69
SHQ1-203ENST00000463369 COL3A1P02461 1466 aaPredicted RBP10.71□□□□□ -0.7
SHQ1-203ENST00000463369 CDK12Q9NYV4 1490 aaPredicted RBP10.71□□□□□ -0.7
SHQ1-203ENST00000463369 RBM47A0AV96 593 aaKnown RBP10.7□□□□□ -0.7
SHQ1-203ENST00000463369 UBAP1LF5GYI3 381 aa10.7□□□□□ -0.7
SHQ1-203ENST00000463369 ZNF500O60304 480 aaPredicted RBP10.7□□□□□ -0.7
SHQ1-203ENST00000463369 RAB3GAP1Q15042 981 aa10.7□□□□□ -0.7
SHQ1-203ENST00000463369 SMYD5Q6GMV2 418 aa10.7□□□□□ -0.7
SHQ1-203ENST00000463369 SMC5Q8IY18 1101 aa10.7□□□□□ -0.7
SHQ1-203ENST00000463369 NGEFQ8N5V2 710 aa10.7□□□□□ -0.7
SHQ1-203ENST00000463369 KCNH5Q8NCM2 988 aa10.7□□□□□ -0.7
SHQ1-203ENST00000463369 SNX21Q969T3 373 aa10.7□□□□□ -0.7
SHQ1-203ENST00000463369 RNF39Q9H2S5 420 aa10.7□□□□□ -0.7
SHQ1-203ENST00000463369 RWDD1Q9H446 243 aaPredicted RBP10.7□□□□□ -0.7
SHQ1-203ENST00000463369 COL22A1Q8NFW1 1626 aaPredicted RBP10.7□□□□□ -0.7
SHQ1-203ENST00000463369 SETQ01105 290 aaPredicted RBP10.7□□□□□ -0.7
SHQ1-203ENST00000463369 RRS1Q15050 365 aaKnown RBP10.7□□□□□ -0.7
SHQ1-203ENST00000463369 CFAP53Q96M91 514 aa10.7□□□□□ -0.7
SHQ1-203ENST00000463369 PPME1Q9Y570 386 aa10.7□□□□□ -0.7
SHQ1-203ENST00000463369 EMILIN1Q9Y6C2 1016 aa10.7□□□□□ -0.7
SHQ1-203ENST00000463369 COL18A1P39060 1754 aa10.69□□□□□ -0.7
SHQ1-203ENST00000463369 DYNC1I1O14576 645 aa10.69□□□□□ -0.7
SHQ1-203ENST00000463369 UTP14CQ5TAP6 766 aaKnown RBP10.69□□□□□ -0.7
SHQ1-203ENST00000463369 ZNF662Q6ZS27 426 aa10.69□□□□□ -0.7
SHQ1-203ENST00000463369 RGPD2P0DJD1 1756 aa10.69□□□□□ -0.7
SHQ1-203ENST00000463369 IBTKQ9P2D0 1353 aaPredicted RBP10.69□□□□□ -0.7
SHQ1-203ENST00000463369 UQCRHLA0A096LP55 91 aa10.69□□□□□ -0.7
SHQ1-203ENST00000463369 GCP02774 474 aa10.69□□□□□ -0.7
SHQ1-203ENST00000463369 UQCRHP07919 91 aa10.69□□□□□ -0.7
SHQ1-203ENST00000463369 PIP4K2BP78356 416 aa10.69□□□□□ -0.7
SHQ1-203ENST00000463369 NOL7Q9UMY1 257 aaKnown RBP10.69□□□□□ -0.7
SHQ1-203ENST00000463369 KIF24Q5T7B8 1368 aa10.68□□□□□ -0.7
SHQ1-203ENST00000463369 SOX12O15370 315 aa10.68□□□□□ -0.7
SHQ1-203ENST00000463369 MAFGO15525 162 aa10.68□□□□□ -0.7
SHQ1-203ENST00000463369 LRRC59Q96AG4 307 aaKnown RBP10.68□□□□□ -0.7
SHQ1-203ENST00000463369 MAP3K19Q56UN5 1328 aa10.68□□□□□ -0.7
SHQ1-203ENST00000463369 RGPD1P0DJD0 1748 aa10.68□□□□□ -0.7
SHQ1-203ENST00000463369 SREK1Q8WXA9 508 aaKnown RBP10.67□□□□□ -0.7
SHQ1-203ENST00000463369 DMTNQ08495 405 aa10.67□□□□□ -0.7
SHQ1-203ENST00000463369 CNPY4Q8N129 248 aa10.67□□□□□ -0.7
SHQ1-203ENST00000463369 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.66□□□□□ -0.7
SHQ1-203ENST00000463369 SUGT1Q9Y2Z0 365 aa10.66□□□□□ -0.7
SHQ1-203ENST00000463369 FLT4P35916 1363 aa10.66□□□□□ -0.7
SHQ1-203ENST00000463369 RTL1A6NKG5 1358 aa10.65□□□□□ -0.7
SHQ1-203ENST00000463369 DIAPH1O60610 1272 aaKnown RBP10.65□□□□□ -0.7
SHQ1-203ENST00000463369 RLBP1P12271 317 aa10.65□□□□□ -0.7
SHQ1-203ENST00000463369 RARSP54136 660 aaKnown RBP10.65□□□□□ -0.7
SHQ1-203ENST00000463369 CSPP1Q1MSJ5 1256 aa10.65□□□□□ -0.7
SHQ1-203ENST00000463369 ARHGEF25Q86VW2 580 aa10.65□□□□□ -0.7
SHQ1-203ENST00000463369 PPP1R1BQ9UD71 204 aaPredicted RBP10.65□□□□□ -0.7
SHQ1-203ENST00000463369 AMPHP49418 695 aa10.65□□□□□ -0.7
SHQ1-203ENST00000463369 KLHL40Q2TBA0 621 aa10.65□□□□□ -0.7
SHQ1-203ENST00000463369 HSP90AB4PQ58FF6 505 aa10.65□□□□□ -0.7
SHQ1-203ENST00000463369 CLEC17AQ6ZS10 378 aa10.65□□□□□ -0.7
SHQ1-203ENST00000463369 CABLES1Q8TDN4 633 aa10.65□□□□□ -0.7
SHQ1-203ENST00000463369 MICAL1Q8TDZ2 1067 aa10.65□□□□□ -0.7
SHQ1-203ENST00000463369 PDLIM2Q96JY6 352 aa10.65□□□□□ -0.7
SHQ1-203ENST00000463369 ZHX1Q9UKY1 873 aaPredicted RBP10.65□□□□□ -0.7
SHQ1-203ENST00000463369 ABCC6O95255 1503 aa10.64□□□□□ -0.71
SHQ1-203ENST00000463369 TPD52L2O43399 206 aaKnown RBP10.64□□□□□ -0.71
SHQ1-203ENST00000463369 HSP90AB1P08238 724 aaKnown RBP10.64□□□□□ -0.71
SHQ1-203ENST00000463369 HOXC9P31274 260 aa10.64□□□□□ -0.71
SHQ1-203ENST00000463369 ZNF445P59923 1031 aa10.64□□□□□ -0.71
SHQ1-203ENST00000463369 SKIV2LQ15477 1246 aaKnown RBP10.64□□□□□ -0.71
SHQ1-203ENST00000463369 HSP90AB2PQ58FF8 381 aa10.64□□□□□ -0.71
SHQ1-203ENST00000463369 GIMAP6Q6P9H5 292 aa10.64□□□□□ -0.71
SHQ1-203ENST00000463369 IP6K1Q92551 441 aa10.64□□□□□ -0.71
SHQ1-203ENST00000463369 CCDC94Q9BW85 323 aaPredicted RBP10.64□□□□□ -0.71
SHQ1-203ENST00000463369 RBM27Q9P2N5 1060 aaKnown RBP10.64□□□□□ -0.71
SHQ1-203ENST00000463369 DLG5Q8TDM6 1919 aa10.64□□□□□ -0.71
SHQ1-203ENST00000463369 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.64□□□□□ -0.71
SHQ1-203ENST00000463369 GOLGA6L22H0YM25 854 aa10.64□□□□□ -0.71
SHQ1-203ENST00000463369 ZSCAN20P17040 1043 aaPredicted RBP10.64□□□□□ -0.71
SHQ1-203ENST00000463369 MCM5P33992 734 aa10.64□□□□□ -0.71
SHQ1-203ENST00000463369 IL13P35225 146 aa10.64□□□□□ -0.71
SHQ1-203ENST00000463369 WWC1Q8IX03 1113 aa10.64□□□□□ -0.71
SHQ1-203ENST00000463369 U3KPZ7 1027 aaPredicted RBP10.64□□□□□ -0.71
SHQ1-203ENST00000463369 FAM208AQ9UK61 1670 aaKnown RBP10.64□□□□□ -0.71
SHQ1-203ENST00000463369 CPDO75976 1380 aa10.63□□□□□ -0.71
SHQ1-203ENST00000463369 SASS6Q6UVJ0 657 aa10.63□□□□□ -0.71
SHQ1-203ENST00000463369 TNNQ9UQP3 1299 aa10.63□□□□□ -0.71
SHQ1-203ENST00000463369 LMO7Q8WWI1 1683 aa10.63□□□□□ -0.71
SHQ1-203ENST00000463369 EIF4A2Q14240 407 aaKnown RBP10.62□□□□□ -0.71
SHQ1-203ENST00000463369 GOPCQ9HD26 462 aa10.62□□□□□ -0.71
SHQ1-203ENST00000463369 ZKSCAN5Q9Y2L8 839 aa10.62□□□□□ -0.71
SHQ1-203ENST00000463369 DDX49Q9Y6V7 483 aaKnown RBP10.62□□□□□ -0.71
SHQ1-203ENST00000463369 ZC3H6P61129 1189 aaKnown RBP10.62□□□□□ -0.71
SHQ1-203ENST00000463369 COL14A1Q05707 1796 aaKnown RBP10.62□□□□□ -0.71
SHQ1-203ENST00000463369 CAMTA1Q9Y6Y1 1673 aa10.61□□□□□ -0.71
SHQ1-203ENST00000463369 U2SURPO15042 1029 aaKnown RBP10.61□□□□□ -0.71
SHQ1-203ENST00000463369 U2AF1L5P0DN76 240 aaPredicted RBP10.61□□□□□ -0.71
SHQ1-203ENST00000463369 U2AF1Q01081 240 aaKnown RBP eCLIP10.61□□□□□ -0.71
SHQ1-203ENST00000463369 KIAA0232Q92628 1395 aa10.6□□□□□ -0.71
SHQ1-203ENST00000463369 BAG4O95429 457 aaKnown RBP10.6□□□□□ -0.71
SHQ1-203ENST00000463369 SSFA2P28290 1259 aa10.6□□□□□ -0.71
SHQ1-203ENST00000463369 MVPQ14764 893 aaKnown RBP10.6□□□□□ -0.71
SHQ1-203ENST00000463369 PARP9Q8IXQ6 854 aa10.6□□□□□ -0.71
SHQ1-203ENST00000463369 SGSM3Q96HU1 749 aa10.6□□□□□ -0.71
SHQ1-203ENST00000463369 PLCH1Q4KWH8 1693 aa10.59□□□□□ -0.71
SHQ1-203ENST00000463369 RAB11FIP3O75154 756 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 1127.4 ms