RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 CACNA1FO60840 1977 aa18.41■□□□□ 0.54
COL6A1-202ENST00000463060 SLC4A2P04920 1241 aa18.41■□□□□ 0.54
COL6A1-202ENST00000463060 NECTIN2Q92692 538 aa18.41■□□□□ 0.54
COL6A1-202ENST00000463060 DDX21Q9NR30 783 aaKnown RBP eCLIP18.41■□□□□ 0.54
COL6A1-202ENST00000463060 ERBB4Q15303 1308 aa18.41■□□□□ 0.54
COL6A1-202ENST00000463060 NBPF26B4DH59 902 aa18.4■□□□□ 0.54
COL6A1-202ENST00000463060 ATP6V1AP38606 617 aa18.4■□□□□ 0.54
COL6A1-202ENST00000463060 NBPF14Q5TI25 921 aa18.4■□□□□ 0.54
COL6A1-202ENST00000463060 NBPF10Q6P3W6 841 aaKnown RBP18.4■□□□□ 0.54
COL6A1-202ENST00000463060 NBPF15Q8N660 670 aa18.4■□□□□ 0.54
COL6A1-202ENST00000463060 DBF4Q9UBU7 674 aaPredicted RBP18.4■□□□□ 0.54
COL6A1-202ENST00000463060 TNS1Q9HBL0 1735 aaKnown RBP18.4■□□□□ 0.54
COL6A1-202ENST00000463060 RRP1P56182 461 aaKnown RBP18.39■□□□□ 0.53
COL6A1-202ENST00000463060 PROSER3Q2NL68 480 aa18.39■□□□□ 0.53
COL6A1-202ENST00000463060 G2E3Q7L622 706 aa18.39■□□□□ 0.53
COL6A1-202ENST00000463060 PROM2Q8N271 834 aa18.39■□□□□ 0.53
COL6A1-202ENST00000463060 UPF1Q92900 1129 aaKnown RBP eCLIP18.39■□□□□ 0.53
COL6A1-202ENST00000463060 CHPF2Q9P2E5 772 aa18.39■□□□□ 0.53
COL6A1-202ENST00000463060 STARD3NLO95772 234 aa18.38■□□□□ 0.53
COL6A1-202ENST00000463060 A1BGP04217 495 aa18.38■□□□□ 0.53
COL6A1-202ENST00000463060 ARHGAP45Q92619 1136 aa18.38■□□□□ 0.53
COL6A1-202ENST00000463060 STK31Q9BXU1 1019 aa18.38■□□□□ 0.53
COL6A1-202ENST00000463060 NOB1Q9ULX3 412 aaKnown RBP18.38■□□□□ 0.53
COL6A1-202ENST00000463060 PLIN1O60240 522 aa18.37■□□□□ 0.53
COL6A1-202ENST00000463060 APBA3O96018 575 aa18.37■□□□□ 0.53
COL6A1-202ENST00000463060 INTS5Q6P9B9 1019 aaKnown RBP18.37■□□□□ 0.53
COL6A1-202ENST00000463060 LRRC4BQ9NT99 713 aa18.37■□□□□ 0.53
COL6A1-202ENST00000463060 HYPKQ9NX55 129 aa18.37■□□□□ 0.53
COL6A1-202ENST00000463060 KIF16BQ96L93 1317 aa18.37■□□□□ 0.53
COL6A1-202ENST00000463060 RREB1Q92766 1687 aa18.37■□□□□ 0.53
COL6A1-202ENST00000463060 COL5A3P25940 1745 aaPredicted RBP18.37■□□□□ 0.53
COL6A1-202ENST00000463060 ANXA1P04083 346 aa18.36■□□□□ 0.53
COL6A1-202ENST00000463060 KCNQ4P56696 695 aa18.36■□□□□ 0.53
COL6A1-202ENST00000463060 SLC27A3Q5K4L6 730 aa18.36■□□□□ 0.53
COL6A1-202ENST00000463060 LINC00116Q8NCU8 138 aa18.36■□□□□ 0.53
COL6A1-202ENST00000463060 PHAXQ9H814 394 aaKnown RBP18.36■□□□□ 0.53
COL6A1-202ENST00000463060 RC3H1Q5TC82 1133 aaKnown RBP18.35■□□□□ 0.53
COL6A1-202ENST00000463060 CCNL1Q9UK58 526 aaPredicted RBP18.35■□□□□ 0.53
COL6A1-202ENST00000463060 MYH14Q7Z406 1995 aaKnown RBP18.35■□□□□ 0.53
COL6A1-202ENST00000463060 TAF1LQ8IZX4 1826 aa18.35■□□□□ 0.53
COL6A1-202ENST00000463060 PTPRCP08575 1304 aa18.34■□□□□ 0.53
COL6A1-202ENST00000463060 IPO8O15397 1037 aaKnown RBP18.34■□□□□ 0.53
COL6A1-202ENST00000463060 CRKLP46109 303 aaKnown RBP18.34■□□□□ 0.53
COL6A1-202ENST00000463060 FLIIQ13045 1269 aa18.34■□□□□ 0.53
COL6A1-202ENST00000463060 RGPD3A6NKT7 1758 aaPredicted RBP18.34■□□□□ 0.53
COL6A1-202ENST00000463060 RGPD4Q7Z3J3 1758 aa18.34■□□□□ 0.53
COL6A1-202ENST00000463060 CNTNAP4Q9C0A0 1308 aa18.33■□□□□ 0.53
COL6A1-202ENST00000463060 TRIM27P14373 513 aa18.33■□□□□ 0.52
COL6A1-202ENST00000463060 PIP4K2AP48426 406 aaPredicted RBP18.33■□□□□ 0.52
COL6A1-202ENST00000463060 TXNRD1Q16881 649 aa18.33■□□□□ 0.52
COL6A1-202ENST00000463060 ZKSCAN2Q63HK3 967 aa18.33■□□□□ 0.52
COL6A1-202ENST00000463060 ATF7IPQ6VMQ6 1270 aa18.33■□□□□ 0.52
COL6A1-202ENST00000463060 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.33■□□□□ 0.52
COL6A1-202ENST00000463060 FRAT1Q92837 279 aaPredicted RBP18.33■□□□□ 0.52
COL6A1-202ENST00000463060 CAMKK2Q96RR4 588 aa18.33■□□□□ 0.52
COL6A1-202ENST00000463060 CCDC87Q9NVE4 849 aa18.33■□□□□ 0.52
COL6A1-202ENST00000463060 TNNQ9UQP3 1299 aa18.33■□□□□ 0.52
COL6A1-202ENST00000463060 ZBTB1Q9Y2K1 713 aa18.33■□□□□ 0.52
COL6A1-202ENST00000463060 MYL6BP14649 208 aa18.32■□□□□ 0.52
COL6A1-202ENST00000463060 PDE3AQ14432 1141 aa18.32■□□□□ 0.52
COL6A1-202ENST00000463060 IL6STP40189 918 aaPredicted RBP18.31■□□□□ 0.52
COL6A1-202ENST00000463060 EIF5P55010 431 aaKnown RBP18.31■□□□□ 0.52
COL6A1-202ENST00000463060 C20orf194Q5TEA3 1177 aa18.31■□□□□ 0.52
COL6A1-202ENST00000463060 CCDC125Q86Z20 511 aa18.31■□□□□ 0.52
COL6A1-202ENST00000463060 RLBP1P12271 317 aa18.3■□□□□ 0.52
COL6A1-202ENST00000463060 COPS6Q7L5N1 327 aa18.3■□□□□ 0.52
COL6A1-202ENST00000463060 XAGE3Q8WTP9 111 aa18.3■□□□□ 0.52
COL6A1-202ENST00000463060 API5Q9BZZ5 524 aaKnown RBP18.3■□□□□ 0.52
COL6A1-202ENST00000463060 ABCC4O15439 1325 aa18.29■□□□□ 0.52
COL6A1-202ENST00000463060 CANXP27824 592 aaKnown RBP18.29■□□□□ 0.52
COL6A1-202ENST00000463060 ADCY9O60503 1353 aa18.29■□□□□ 0.52
COL6A1-202ENST00000463060 RPS6KA4O75676 772 aa18.28■□□□□ 0.52
COL6A1-202ENST00000463060 KSR2Q6VAB6 950 aa18.28■□□□□ 0.52
COL6A1-202ENST00000463060 TTLL7Q6ZT98 887 aa18.28■□□□□ 0.52
COL6A1-202ENST00000463060 DZIP1LQ8IYY4 767 aaKnown RBP18.28■□□□□ 0.52
COL6A1-202ENST00000463060 C4BP0C0L5 1744 aa18.28■□□□□ 0.52
COL6A1-202ENST00000463060 MS4A1P11836 297 aa18.27■□□□□ 0.52
COL6A1-202ENST00000463060 HMGB2P26583 209 aaKnown RBP18.27■□□□□ 0.52
COL6A1-202ENST00000463060 EN1Q05925 392 aaPredicted RBP18.27■□□□□ 0.52
COL6A1-202ENST00000463060 FKBP5Q13451 457 aaPredicted RBP18.27■□□□□ 0.52
COL6A1-202ENST00000463060 PI4KAP2A4QPH2 592 aa18.26■□□□□ 0.51
COL6A1-202ENST00000463060 F6X3S4 739 aa18.26■□□□□ 0.51
COL6A1-202ENST00000463060 AIMP1Q12904 312 aaKnown RBP18.26■□□□□ 0.51
COL6A1-202ENST00000463060 EZH2Q15910 746 aaKnown RBP18.26■□□□□ 0.51
COL6A1-202ENST00000463060 ANKRD13DQ6ZTN6 518 aa18.26■□□□□ 0.51
COL6A1-202ENST00000463060 PI4KAP1Q8N8J0 262 aa18.26■□□□□ 0.51
COL6A1-202ENST00000463060 PANK1Q8TE04 598 aa18.26■□□□□ 0.51
COL6A1-202ENST00000463060 CLUAP1Q96AJ1 413 aa18.26■□□□□ 0.51
COL6A1-202ENST00000463060 BAG6P46379 1132 aa18.25■□□□□ 0.51
COL6A1-202ENST00000463060 INTS3Q68E01 1043 aaKnown RBP18.25■□□□□ 0.51
COL6A1-202ENST00000463060 AMIGO3Q86WK7 504 aa18.25■□□□□ 0.51
COL6A1-202ENST00000463060 PLBD2Q8NHP8 589 aa18.25■□□□□ 0.51
COL6A1-202ENST00000463060 AKT1S1Q96B36 256 aa18.25■□□□□ 0.51
COL6A1-202ENST00000463060 DDX58O95786 925 aaKnown RBP18.24■□□□□ 0.51
COL6A1-202ENST00000463060 SF3B2Q13435 895 aaKnown RBP18.24■□□□□ 0.51
COL6A1-202ENST00000463060 DEFB132Q7Z7B7 95 aa18.24■□□□□ 0.51
COL6A1-202ENST00000463060 TMEM57Q8N5G2 664 aa18.23■□□□□ 0.51
COL6A1-202ENST00000463060 DNAAF4Q8WXU2 420 aa18.23■□□□□ 0.51
COL6A1-202ENST00000463060 MAP3K2Q9Y2U5 619 aa18.23■□□□□ 0.51
COL6A1-202ENST00000463060 MAP3K15Q6ZN16 1313 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms