RNA–Protein interactions for RNA: ENST00000461603.5

LMBR1-215, Transcript of limb development membrane protein 1, humanhuman

TSL 4

Gene LMBR1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-215ENST00000461603 MED14O60244 1454 aa8.89□□□□□ -0.99
LMBR1-215ENST00000461603 ADGBQ8N7X0 1667 aa8.88□□□□□ -0.99
LMBR1-215ENST00000461603 DEPDC5O75140 1603 aa8.88□□□□□ -0.99
LMBR1-215ENST00000461603 SYNMO15061 1565 aa8.88□□□□□ -0.99
LMBR1-215ENST00000461603 UGGT1Q9NYU2 1555 aa8.88□□□□□ -0.99
LMBR1-215ENST00000461603 GPATCH8Q9UKJ3 1502 aaKnown RBP8.88□□□□□ -0.99
LMBR1-215ENST00000461603 PZPP20742 1482 aa8.88□□□□□ -0.99
LMBR1-215ENST00000461603 CCDC18Q5T9S5 1454 aa8.88□□□□□ -0.99
LMBR1-215ENST00000461603 FAM135AQ9P2D6 1515 aa8.87□□□□□ -0.99
LMBR1-215ENST00000461603 ST8SIA5O15466 376 aa8.87□□□□□ -0.99
LMBR1-215ENST00000461603 ZIC2O95409 532 aaPredicted RBP8.87□□□□□ -0.99
LMBR1-215ENST00000461603 ABL2P42684 1182 aa8.87□□□□□ -0.99
LMBR1-215ENST00000461603 PPP1R26Q5T8A7 1209 aaPredicted RBP8.87□□□□□ -0.99
LMBR1-215ENST00000461603 THEMISQ8N1K5 641 aaPredicted RBP8.87□□□□□ -0.99
LMBR1-215ENST00000461603 ATP13A2Q9NQ11 1180 aa8.87□□□□□ -0.99
LMBR1-215ENST00000461603 Q6ZVU0 165 aa8.86□□□□□ -0.99
LMBR1-215ENST00000461603 ITPKCQ96DU7 683 aa8.86□□□□□ -0.99
LMBR1-215ENST00000461603 KIAA1107Q9UPP5 1409 aa8.86□□□□□ -0.99
LMBR1-215ENST00000461603 KDM5DQ9BY66 1539 aa8.85□□□□□ -0.99
LMBR1-215ENST00000461603 PLEKHH2Q8IVE3 1493 aa8.85□□□□□ -0.99
LMBR1-215ENST00000461603 NLRP1Q9C000 1473 aa8.85□□□□□ -0.99
LMBR1-215ENST00000461603 A6NJR5 290 aa8.85□□□□□ -0.99
LMBR1-215ENST00000461603 MEIOBQ8N635 442 aa8.85□□□□□ -0.99
LMBR1-215ENST00000461603 CFDP1Q9UEE9 299 aaPredicted RBP8.85□□□□□ -0.99
LMBR1-215ENST00000461603 CASKIN1Q8WXD9 1431 aa8.85□□□□□ -0.99
LMBR1-215ENST00000461603 MIA2Q96PC5 1412 aa8.85□□□□□ -0.99
LMBR1-215ENST00000461603 KIF3BO15066 747 aa8.84□□□□□ -0.99
LMBR1-215ENST00000461603 UPP2O95045 317 aa8.84□□□□□ -0.99
LMBR1-215ENST00000461603 SCARF1Q14162 830 aa8.84□□□□□ -0.99
LMBR1-215ENST00000461603 TSEN34Q9BSV6 310 aaKnown RBP8.84□□□□□ -0.99
LMBR1-215ENST00000461603 CEP126Q9P2H0 1117 aa8.84□□□□□ -0.99
LMBR1-215ENST00000461603 WASHC2CQ9Y4E1 1318 aa8.83□□□□□ -1
LMBR1-215ENST00000461603 GIGYF1O75420 1035 aaPredicted RBP8.83□□□□□ -1
LMBR1-215ENST00000461603 MRPL14Q6P1L8 145 aaKnown RBP8.83□□□□□ -1
LMBR1-215ENST00000461603 TRIM47Q96LD4 638 aa8.83□□□□□ -1
LMBR1-215ENST00000461603 DHX29Q7Z478 1369 aaKnown RBP8.83□□□□□ -1
LMBR1-215ENST00000461603 ZNF644Q9H582 1327 aaPredicted RBP8.82□□□□□ -1
LMBR1-215ENST00000461603 XIRP1Q702N8 1843 aaKnown RBP8.82□□□□□ -1
LMBR1-215ENST00000461603 ZC3H13Q5T200 1668 aaKnown RBP8.82□□□□□ -1
LMBR1-215ENST00000461603 ERVH48-1M5A8F1 160 aa8.82□□□□□ -1
LMBR1-215ENST00000461603 SEMA3FQ13275 785 aa8.82□□□□□ -1
LMBR1-215ENST00000461603 CHIC2Q9UKJ5 165 aa8.82□□□□□ -1
LMBR1-215ENST00000461603 CCNB3Q8WWL7 1395 aa8.82□□□□□ -1
LMBR1-215ENST00000461603 VAC14Q08AM6 782 aa8.81□□□□□ -1
LMBR1-215ENST00000461603 ZNF787Q6DD87 383 aa8.81□□□□□ -1
LMBR1-215ENST00000461603 NFATC2IPQ8NCF5 419 aa8.81□□□□□ -1
LMBR1-215ENST00000461603 ZFAND3Q9H8U3 227 aa8.81□□□□□ -1
LMBR1-215ENST00000461603 FAM135BQ49AJ0 1406 aa8.8□□□□□ -1
LMBR1-215ENST00000461603 ERVK-9P63128 1117 aa8.8□□□□□ -1
LMBR1-215ENST00000461603 MAP7D1Q3KQU3 841 aa8.8□□□□□ -1
LMBR1-215ENST00000461603 TRIM46Q7Z4K8 759 aa8.8□□□□□ -1
LMBR1-215ENST00000461603 PHTF2Q8N3S3 785 aa8.8□□□□□ -1
LMBR1-215ENST00000461603 FNBP4Q8N3X1 1017 aaPredicted RBP8.8□□□□□ -1
LMBR1-215ENST00000461603 FYCO1Q9BQS8 1478 aa8.8□□□□□ -1
LMBR1-215ENST00000461603 MBD5Q9P267 1494 aa8.8□□□□□ -1
LMBR1-215ENST00000461603 ROBO1Q9Y6N7 1651 aa8.8□□□□□ -1
LMBR1-215ENST00000461603 SCAF11Q99590 1463 aaKnown RBP8.79□□□□□ -1
LMBR1-215ENST00000461603 LZTS3O60299 673 aaPredicted RBP8.79□□□□□ -1
LMBR1-215ENST00000461603 PROSER2Q86WR7 435 aaPredicted RBP8.79□□□□□ -1
LMBR1-215ENST00000461603 SIRT1Q96EB6 747 aa8.79□□□□□ -1
LMBR1-215ENST00000461603 POM121Q96HA1 1249 aa8.79□□□□□ -1
LMBR1-215ENST00000461603 ALG2Q9H553 416 aa8.79□□□□□ -1
LMBR1-215ENST00000461603 DACH1Q9UI36 760 aa8.79□□□□□ -1
LMBR1-215ENST00000461603 RTEL1-TNFRSF6BF6WH68 1400 aa8.79□□□□□ -1
LMBR1-215ENST00000461603 LILRA1O75019 489 aa8.78□□□□□ -1
LMBR1-215ENST00000461603 SLFNL1Q499Z3 407 aa8.78□□□□□ -1
LMBR1-215ENST00000461603 CC2D2BQ6DHV5 1058 aa8.78□□□□□ -1
LMBR1-215ENST00000461603 LINC00528Q8N1L1 170 aa8.78□□□□□ -1
LMBR1-215ENST00000461603 ZNF784Q8NCA9 323 aaPredicted RBP8.78□□□□□ -1
LMBR1-215ENST00000461603 GMPR2Q9P2T1 348 aaKnown RBP8.78□□□□□ -1
LMBR1-215ENST00000461603 C11orf95C9JLR9 678 aaPredicted RBP8.77□□□□□ -1.01
LMBR1-215ENST00000461603 ADH1AP07327 375 aa8.77□□□□□ -1.01
LMBR1-215ENST00000461603 LTKP29376 864 aa8.77□□□□□ -1.01
LMBR1-215ENST00000461603 TIAM1Q13009 1591 aa8.77□□□□□ -1.01
LMBR1-215ENST00000461603 UBR1Q8IWV7 1749 aa8.77□□□□□ -1.01
LMBR1-215ENST00000461603 ERVK-7P63135 1459 aa8.77□□□□□ -1.01
LMBR1-215ENST00000461603 TMEM94Q12767 1356 aa8.76□□□□□ -1.01
LMBR1-215ENST00000461603 MTUS2Q5JR59 1369 aa8.76□□□□□ -1.01
LMBR1-215ENST00000461603 SPINT1O43278 529 aa8.76□□□□□ -1.01
LMBR1-215ENST00000461603 ZFP42Q96MM3 310 aa8.76□□□□□ -1.01
LMBR1-215ENST00000461603 GTF3C3Q9Y5Q9 886 aa8.76□□□□□ -1.01
LMBR1-215ENST00000461603 CFAP65Q6ZU64 1925 aaKnown RBP8.76□□□□□ -1.01
LMBR1-215ENST00000461603 ABCC3O15438 1527 aa8.75□□□□□ -1.01
LMBR1-215ENST00000461603 PHLPP1O60346 1717 aa8.75□□□□□ -1.01
LMBR1-215ENST00000461603 USP4Q13107 963 aa8.75□□□□□ -1.01
LMBR1-215ENST00000461603 CYP2U1Q7Z449 544 aa8.75□□□□□ -1.01
LMBR1-215ENST00000461603 TXNDC2Q86VQ3 553 aa8.75□□□□□ -1.01
LMBR1-215ENST00000461603 RNF135Q8IUD6 432 aa8.75□□□□□ -1.01
LMBR1-215ENST00000461603 TMPRSS4Q9NRS4 437 aa8.75□□□□□ -1.01
LMBR1-215ENST00000461603 NCOA2Q15596 1464 aa8.75□□□□□ -1.01
LMBR1-215ENST00000461603 CCDC141Q6ZP82 1450 aa8.75□□□□□ -1.01
LMBR1-215ENST00000461603 TRAK2O60296 914 aa8.74□□□□□ -1.01
LMBR1-215ENST00000461603 MYCP01106 439 aaPredicted RBP8.74□□□□□ -1.01
LMBR1-215ENST00000461603 BMP1P13497 986 aa8.74□□□□□ -1.01
LMBR1-215ENST00000461603 PCDHB11Q9Y5F2 797 aa8.74□□□□□ -1.01
LMBR1-215ENST00000461603 MAP3K1Q13233 1512 aa8.74□□□□□ -1.01
LMBR1-215ENST00000461603 JCADQ9P266 1359 aa8.73□□□□□ -1.01
LMBR1-215ENST00000461603 LRP6O75581 1613 aa8.73□□□□□ -1.01
LMBR1-215ENST00000461603 LRRC9Q6ZRR7 1453 aa8.73□□□□□ -1.01
LMBR1-215ENST00000461603 ARHGAP23Q9P227 1491 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms