RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544	KDM2B	Q8NHM5	1336 aa		10.43	□□□□□ -0.74
HCG18-238	ENST00000449544	MST1R	Q04912	1400 aa		10.43	□□□□□ -0.74
HCG18-238	ENST00000449544	CEP152	O94986	1710 aa		10.42	□□□□□ -0.74
HCG18-238	ENST00000449544	LDHAL6A	Q6ZMR3	332 aa		10.42	□□□□□ -0.74
HCG18-238	ENST00000449544	LGR6	Q9HBX8	967 aa		10.42	□□□□□ -0.74
HCG18-238	ENST00000449544		F8W031	263 aa	Predicted RBP	10.42	□□□□□ -0.74
HCG18-238	ENST00000449544	CCDC158	Q5M9N0	1113 aa		10.42	□□□□□ -0.74
HCG18-238	ENST00000449544	ILDR2	Q71H61	639 aa		10.42	□□□□□ -0.74
HCG18-238	ENST00000449544	RAI14	Q9P0K7	980 aa		10.42	□□□□□ -0.74
HCG18-238	ENST00000449544	PIK3C2B	O00750	1634 aa		10.42	□□□□□ -0.74
HCG18-238	ENST00000449544	SPATA31E1	Q6ZUB1	1445 aa		10.42	□□□□□ -0.74
HCG18-238	ENST00000449544	PIGB	Q92521	554 aa		10.42	□□□□□ -0.74
HCG18-238	ENST00000449544	ZNF496	Q96IT1	587 aa	Predicted RBP	10.42	□□□□□ -0.74
HCG18-238	ENST00000449544	ANO8	Q9HCE9	1232 aa	Predicted RBP	10.42	□□□□□ -0.74
HCG18-238	ENST00000449544	SPINK5	Q9NQ38	1064 aa	Predicted RBP	10.42	□□□□□ -0.74
HCG18-238	ENST00000449544	RICTOR	Q6R327	1708 aa		10.42	□□□□□ -0.74
HCG18-238	ENST00000449544	PREX1	Q8TCU6	1659 aa		10.42	□□□□□ -0.74
HCG18-238	ENST00000449544	EIF2AK4	Q9P2K8	1649 aa	Known RBP	10.42	□□□□□ -0.74
HCG18-238	ENST00000449544	INSR	P06213	1382 aa		10.42	□□□□□ -0.74
HCG18-238	ENST00000449544	MAP3K5	Q99683	1374 aa		10.42	□□□□□ -0.74
HCG18-238	ENST00000449544	KIF16B	Q96L93	1317 aa		10.41	□□□□□ -0.74
HCG18-238	ENST00000449544	CCER2	I3L3R5	266 aa		10.41	□□□□□ -0.74
HCG18-238	ENST00000449544	UBE3B	Q7Z3V4	1068 aa		10.41	□□□□□ -0.74
HCG18-238	ENST00000449544	CARD14	Q9BXL6	1004 aa		10.41	□□□□□ -0.74
HCG18-238	ENST00000449544	GCC2	Q8IWJ2	1684 aa		10.41	□□□□□ -0.74
HCG18-238	ENST00000449544	SH3TC1	Q8TE82	1336 aa		10.41	□□□□□ -0.74
HCG18-238	ENST00000449544	HTATSF1	O43719	755 aa	Known RBP	10.41	□□□□□ -0.74
HCG18-238	ENST00000449544	GIGYF1	O75420	1035 aa	Predicted RBP	10.41	□□□□□ -0.74
HCG18-238	ENST00000449544	WWC1	Q8IX03	1113 aa		10.41	□□□□□ -0.74
HCG18-238	ENST00000449544	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	10.41	□□□□□ -0.74
HCG18-238	ENST00000449544	LRP2BP	Q9P2M1	347 aa		10.41	□□□□□ -0.74
HCG18-238	ENST00000449544	ALK	Q9UM73	1620 aa		10.4	□□□□□ -0.74
HCG18-238	ENST00000449544	KIF1B	O60333	1816 aa		10.4	□□□□□ -0.74
HCG18-238	ENST00000449544	SURF6	O75683	361 aa	Known RBP	10.4	□□□□□ -0.74
HCG18-238	ENST00000449544	B4GALNT3	Q6L9W6	998 aa		10.4	□□□□□ -0.74
HCG18-238	ENST00000449544	SPATA31D1	Q6ZQQ2	1576 aa		10.4	□□□□□ -0.74
HCG18-238	ENST00000449544	ECM2	O94769	699 aa	Predicted RBP	10.4	□□□□□ -0.74
HCG18-238	ENST00000449544	TCIRG1	Q13488	830 aa		10.4	□□□□□ -0.74
HCG18-238	ENST00000449544	DZIP1	Q86YF9	867 aa	Known RBP	10.4	□□□□□ -0.74
HCG18-238	ENST00000449544	MPND	Q8N594	471 aa		10.4	□□□□□ -0.74
HCG18-238	ENST00000449544	RPS6KA4	O75676	772 aa		10.4	□□□□□ -0.75
HCG18-238	ENST00000449544	PDZRN3	Q9UPQ7	1066 aa		10.4	□□□□□ -0.75
HCG18-238	ENST00000449544	LMTK2	Q8IWU2	1503 aa		10.4	□□□□□ -0.75
HCG18-238	ENST00000449544	TTC39A	Q5SRH9	613 aa		10.39	□□□□□ -0.75
HCG18-238	ENST00000449544	JARID2	Q92833	1246 aa	Predicted RBP	10.39	□□□□□ -0.75
HCG18-238	ENST00000449544	SSH2	Q76I76	1423 aa		10.39	□□□□□ -0.75
HCG18-238	ENST00000449544	HCLS1	P14317	486 aa	Predicted RBP	10.39	□□□□□ -0.75
HCG18-238	ENST00000449544	SLF2	Q8IX21	1173 aa		10.39	□□□□□ -0.75
HCG18-238	ENST00000449544	TAOK3	Q9H2K8	898 aa		10.39	□□□□□ -0.75
HCG18-238	ENST00000449544	PTPRU	Q92729	1446 aa		10.39	□□□□□ -0.75
HCG18-238	ENST00000449544	IRS4	O14654	1257 aa	Predicted RBP	10.39	□□□□□ -0.75
HCG18-238	ENST00000449544	ADRA2B	P18089	450 aa		10.39	□□□□□ -0.75
HCG18-238	ENST00000449544	NUTM1	Q86Y26	1132 aa		10.39	□□□□□ -0.75
HCG18-238	ENST00000449544	SULF1	Q8IWU6	871 aa		10.39	□□□□□ -0.75
HCG18-238	ENST00000449544	SRP68	Q9UHB9	627 aa	Known RBP	10.39	□□□□□ -0.75
HCG18-238	ENST00000449544	RCAN3	Q9UKA8	241 aa		10.39	□□□□□ -0.75
HCG18-238	ENST00000449544	UFL1	O94874	794 aa		10.38	□□□□□ -0.75
HCG18-238	ENST00000449544	DNAAF4	Q8WXU2	420 aa		10.38	□□□□□ -0.75
HCG18-238	ENST00000449544	CCDC93	Q567U6	631 aa		10.38	□□□□□ -0.75
HCG18-238	ENST00000449544	CLASRP	Q8N2M8	674 aa	Known RBP	10.38	□□□□□ -0.75
HCG18-238	ENST00000449544	MTMR7	Q9Y216	660 aa		10.38	□□□□□ -0.75
HCG18-238	ENST00000449544	ZBTB1	Q9Y2K1	713 aa		10.38	□□□□□ -0.75
HCG18-238	ENST00000449544	SSFA2	P28290	1259 aa		10.38	□□□□□ -0.75
HCG18-238	ENST00000449544	MAP3K2	Q9Y2U5	619 aa		10.38	□□□□□ -0.75
HCG18-238	ENST00000449544	PI4KAP2	A4QPH2	592 aa		10.38	□□□□□ -0.75
HCG18-238	ENST00000449544	PI4KAP1	Q8N8J0	262 aa		10.38	□□□□□ -0.75
HCG18-238	ENST00000449544	CHPF2	Q9P2E5	772 aa		10.38	□□□□□ -0.75
HCG18-238	ENST00000449544	TCEAL9	Q9UHQ7	104 aa		10.38	□□□□□ -0.75
HCG18-238	ENST00000449544	PRKG1	Q13976	671 aa		10.37	□□□□□ -0.75
HCG18-238	ENST00000449544	DCPS	Q96C86	337 aa	Known RBP	10.37	□□□□□ -0.75
HCG18-238	ENST00000449544	TECPR2	O15040	1411 aa		10.37	□□□□□ -0.75
HCG18-238	ENST00000449544	C21orf2	O43822	256 aa		10.37	□□□□□ -0.75
HCG18-238	ENST00000449544	RALGAPB	Q86X10	1494 aa		10.37	□□□□□ -0.75
HCG18-238	ENST00000449544		A0A0G2JLW4	131 aa		10.37	□□□□□ -0.75
HCG18-238	ENST00000449544	SLC5A1	P13866	664 aa		10.37	□□□□□ -0.75
HCG18-238	ENST00000449544	RGS3	P49796	1198 aa		10.37	□□□□□ -0.75
HCG18-238	ENST00000449544	FHDC1	Q9C0D6	1143 aa	Predicted RBP	10.37	□□□□□ -0.75
HCG18-238	ENST00000449544	RWDD1	Q9H446	243 aa	Predicted RBP	10.37	□□□□□ -0.75
HCG18-238	ENST00000449544	IFT57	Q9NWB7	429 aa		10.37	□□□□□ -0.75
HCG18-238	ENST00000449544	CCT4	P50991	539 aa	Known RBP	10.36	□□□□□ -0.75
HCG18-238	ENST00000449544	GGA1	Q9UJY5	639 aa		10.36	□□□□□ -0.75
HCG18-238	ENST00000449544	MYOM2	P54296	1465 aa		10.36	□□□□□ -0.75
HCG18-238	ENST00000449544	BLM	P54132	1417 aa	Predicted RBP	10.36	□□□□□ -0.75
HCG18-238	ENST00000449544	FEZ1	Q99689	392 aa		10.36	□□□□□ -0.75
HCG18-238	ENST00000449544	IQCA1L	A6NCM1	817 aa		10.36	□□□□□ -0.75
HCG18-238	ENST00000449544	ZNF804A	Q7Z570	1209 aa		10.36	□□□□□ -0.75
HCG18-238	ENST00000449544	RERE	Q9P2R6	1566 aa		10.36	□□□□□ -0.75
HCG18-238	ENST00000449544	TNNI2	P48788	182 aa		10.36	□□□□□ -0.75
HCG18-238	ENST00000449544	TNIP1	Q15025	636 aa		10.36	□□□□□ -0.75
HCG18-238	ENST00000449544	ATF7IP	Q6VMQ6	1270 aa		10.36	□□□□□ -0.75
HCG18-238	ENST00000449544	DZIP1L	Q8IYY4	767 aa	Known RBP	10.36	□□□□□ -0.75
HCG18-238	ENST00000449544	IQSEC2	Q5JU85	1478 aa		10.35	□□□□□ -0.75
HCG18-238	ENST00000449544	ZC3H13	Q5T200	1668 aa	Known RBP	10.35	□□□□□ -0.75
HCG18-238	ENST00000449544	CYP27B1	O15528	508 aa		10.35	□□□□□ -0.75
HCG18-238	ENST00000449544	EIF5B	O60841	1220 aa	Known RBP	10.35	□□□□□ -0.75
HCG18-238	ENST00000449544	FKBP4	Q02790	459 aa	Known RBP eCLIP	10.35	□□□□□ -0.75
HCG18-238	ENST00000449544	FAM89A	Q96GI7	184 aa		10.35	□□□□□ -0.75
HCG18-238	ENST00000449544	LDHC	P07864	332 aa		10.35	□□□□□ -0.75
HCG18-238	ENST00000449544	FKBP8	Q14318	412 aa		10.35	□□□□□ -0.75
HCG18-238	ENST00000449544	DNAJC2	Q99543	621 aa	Known RBP	10.35	□□□□□ -0.75

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms