RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 ABCF2Q9UG63 623 aa12.23□□□□□ -0.45
CTC1-202ENST00000449476 ZNF518AQ6AHZ1 1483 aa12.23□□□□□ -0.45
CTC1-202ENST00000449476 PPIP5K1Q6PFW1 1433 aa12.23□□□□□ -0.45
CTC1-202ENST00000449476 NUTM2BA6NNL0 878 aaPredicted RBP12.23□□□□□ -0.45
CTC1-202ENST00000449476 NUTM2EB1AL46 878 aaPredicted RBP12.23□□□□□ -0.45
CTC1-202ENST00000449476 NUTM2AQ8IVF1 878 aaPredicted RBP12.23□□□□□ -0.45
CTC1-202ENST00000449476 RUFY1Q96T51 708 aa12.23□□□□□ -0.45
CTC1-202ENST00000449476 TMOD3Q9NYL9 352 aa12.23□□□□□ -0.45
CTC1-202ENST00000449476 TEX14Q8IWB6 1497 aa12.23□□□□□ -0.45
CTC1-202ENST00000449476 IGHMBP2P38935 993 aaKnown RBP12.22□□□□□ -0.45
CTC1-202ENST00000449476 PHACTR3Q96KR7 559 aa12.22□□□□□ -0.45
CTC1-202ENST00000449476 NOL7Q9UMY1 257 aaKnown RBP12.22□□□□□ -0.45
CTC1-202ENST00000449476 KLHL40Q2TBA0 621 aa12.22□□□□□ -0.45
CTC1-202ENST00000449476 PPFIBP1Q86W92 1011 aa12.22□□□□□ -0.45
CTC1-202ENST00000449476 SMC5Q8IY18 1101 aa12.22□□□□□ -0.45
CTC1-202ENST00000449476 CAGE1Q8TC20 777 aa12.22□□□□□ -0.45
CTC1-202ENST00000449476 ZBTB40Q9NUA8 1239 aa12.22□□□□□ -0.45
CTC1-202ENST00000449476 TNRQ92752 1358 aa12.22□□□□□ -0.45
CTC1-202ENST00000449476 STX6O43752 255 aa12.22□□□□□ -0.45
CTC1-202ENST00000449476 HMGB1P09429 215 aaKnown RBP12.22□□□□□ -0.45
CTC1-202ENST00000449476 IFIT5Q13325 482 aaKnown RBP12.22□□□□□ -0.45
CTC1-202ENST00000449476 C16orf71Q8IYS4 520 aaPredicted RBP12.22□□□□□ -0.45
CTC1-202ENST00000449476 TTC21AQ8NDW8 1320 aa12.21□□□□□ -0.45
CTC1-202ENST00000449476 UBE3BQ7Z3V4 1068 aa12.21□□□□□ -0.45
CTC1-202ENST00000449476 TMX3Q96JJ7 454 aa12.21□□□□□ -0.45
CTC1-202ENST00000449476 CBFA2T2O43439 604 aa12.21□□□□□ -0.45
CTC1-202ENST00000449476 KRT28Q7Z3Y7 464 aa12.21□□□□□ -0.45
CTC1-202ENST00000449476 ATP5J2-PTCD1G3V325 749 aa12.21□□□□□ -0.46
CTC1-202ENST00000449476 GUCY1B3Q02153 619 aa12.21□□□□□ -0.46
CTC1-202ENST00000449476 FAM177A1Q8N128 213 aaPredicted RBP12.21□□□□□ -0.46
CTC1-202ENST00000449476 WASF1Q92558 559 aa12.21□□□□□ -0.46
CTC1-202ENST00000449476 ZBTB3Q9H5J0 574 aa12.21□□□□□ -0.46
CTC1-202ENST00000449476 WDR7Q9Y4E6 1490 aa12.21□□□□□ -0.46
CTC1-202ENST00000449476 IFNL2Q8IZJ0 200 aa12.21□□□□□ -0.46
CTC1-202ENST00000449476 TFIP11Q9UBB9 837 aaKnown RBP12.21□□□□□ -0.46
CTC1-202ENST00000449476 USP25Q9UHP3 1055 aa12.21□□□□□ -0.46
CTC1-202ENST00000449476 A0A1W2PP64 1363 aa12.2□□□□□ -0.46
CTC1-202ENST00000449476 UHRF1BP1LA0JNW5 1464 aa12.2□□□□□ -0.46
CTC1-202ENST00000449476 SEC24BO95487 1268 aa12.2□□□□□ -0.46
CTC1-202ENST00000449476 GJB2P29033 226 aa12.2□□□□□ -0.46
CTC1-202ENST00000449476 C8orf76Q96K31 380 aa12.2□□□□□ -0.46
CTC1-202ENST00000449476 DISP1Q96F81 1524 aa12.2□□□□□ -0.46
CTC1-202ENST00000449476 ATP2B2Q01814 1243 aa12.2□□□□□ -0.46
CTC1-202ENST00000449476 KRT24Q2M2I5 525 aa12.2□□□□□ -0.46
CTC1-202ENST00000449476 SMTNL1A8MU46 457 aa12.2□□□□□ -0.46
CTC1-202ENST00000449476 CCAR1Q8IX12 1150 aaKnown RBP12.2□□□□□ -0.46
CTC1-202ENST00000449476 ANKRD24Q8TF21 1146 aa12.2□□□□□ -0.46
CTC1-202ENST00000449476 AK7Q96M32 723 aa12.2□□□□□ -0.46
CTC1-202ENST00000449476 CHPF2Q9P2E5 772 aa12.2□□□□□ -0.46
CTC1-202ENST00000449476 STIM1Q13586 685 aa12.19□□□□□ -0.46
CTC1-202ENST00000449476 CKAP2LQ8IYA6 745 aa12.19□□□□□ -0.46
CTC1-202ENST00000449476 DCTPP1Q9H773 170 aa12.19□□□□□ -0.46
CTC1-202ENST00000449476 ZNHIT6Q9NWK9 470 aaKnown RBP12.19□□□□□ -0.46
CTC1-202ENST00000449476 ATP8B2P98198 1209 aa12.19□□□□□ -0.46
CTC1-202ENST00000449476 BICDL1Q6ZP65 573 aa12.19□□□□□ -0.46
CTC1-202ENST00000449476 SNX21Q969T3 373 aa12.19□□□□□ -0.46
CTC1-202ENST00000449476 NAPBQ9H115 298 aa12.19□□□□□ -0.46
CTC1-202ENST00000449476 ESYT1Q9BSJ8 1104 aa12.19□□□□□ -0.46
CTC1-202ENST00000449476 RBM27Q9P2N5 1060 aaKnown RBP12.19□□□□□ -0.46
CTC1-202ENST00000449476 NPC1L1Q9UHC9 1359 aa12.19□□□□□ -0.46
CTC1-202ENST00000449476 ADGRL2O95490 1459 aa12.19□□□□□ -0.46
CTC1-202ENST00000449476 RIMS2Q9UQ26 1411 aa12.19□□□□□ -0.46
CTC1-202ENST00000449476 GOLIM4O00461 696 aa12.19□□□□□ -0.46
CTC1-202ENST00000449476 CCT2P78371 535 aaKnown RBP12.19□□□□□ -0.46
CTC1-202ENST00000449476 MTHFSDQ2M296 383 aaKnown RBP12.19□□□□□ -0.46
CTC1-202ENST00000449476 ABCC10Q5T3U5 1492 aa12.18□□□□□ -0.46
CTC1-202ENST00000449476 ZNF213O14771 459 aa12.18□□□□□ -0.46
CTC1-202ENST00000449476 CFAP100Q494V2 611 aa12.18□□□□□ -0.46
CTC1-202ENST00000449476 SOGA3Q5TF21 947 aa12.18□□□□□ -0.46
CTC1-202ENST00000449476 ANO10Q9NW15 660 aa12.18□□□□□ -0.46
CTC1-202ENST00000449476 KRT18P05783 430 aaKnown RBP12.18□□□□□ -0.46
CTC1-202ENST00000449476 PIBF1Q8WXW3 757 aa12.18□□□□□ -0.46
CTC1-202ENST00000449476 MINDY4BA8MYZ0 360 aa12.18□□□□□ -0.46
CTC1-202ENST00000449476 JARID2Q92833 1246 aaPredicted RBP12.18□□□□□ -0.46
CTC1-202ENST00000449476 ERCC4Q92889 916 aaPredicted RBP12.18□□□□□ -0.46
CTC1-202ENST00000449476 TRMT112Q9UI30 125 aaKnown RBP12.18□□□□□ -0.46
CTC1-202ENST00000449476 CT47A1Q5JQC4 288 aaPredicted RBP12.18□□□□□ -0.46
CTC1-202ENST00000449476 ANKRD13DQ6ZTN6 518 aa12.18□□□□□ -0.46
CTC1-202ENST00000449476 SNRKQ9NRH2 765 aa12.18□□□□□ -0.46
CTC1-202ENST00000449476 SETQ01105 290 aaPredicted RBP12.17□□□□□ -0.46
CTC1-202ENST00000449476 CEP85Q6P2H3 762 aa12.17□□□□□ -0.46
CTC1-202ENST00000449476 DDX19AQ9NUU7 478 aaKnown RBP12.17□□□□□ -0.46
CTC1-202ENST00000449476 NPATQ14207 1427 aa12.17□□□□□ -0.46
CTC1-202ENST00000449476 SNRPA1P09661 255 aaKnown RBP12.17□□□□□ -0.46
CTC1-202ENST00000449476 MAP3K12Q12852 859 aa12.17□□□□□ -0.46
CTC1-202ENST00000449476 CCDC82Q8N4S0 544 aa12.17□□□□□ -0.46
CTC1-202ENST00000449476 NEK1Q96PY6 1258 aa12.17□□□□□ -0.46
CTC1-202ENST00000449476 ANAPC15P60006 121 aa12.17□□□□□ -0.46
CTC1-202ENST00000449476 DMRT2Q9Y5R5 561 aa12.17□□□□□ -0.46
CTC1-202ENST00000449476 RNF123Q5XPI4 1314 aa12.16□□□□□ -0.46
CTC1-202ENST00000449476 GPTP24298 496 aa12.16□□□□□ -0.46
CTC1-202ENST00000449476 HSP90AB3PQ58FF7 597 aa12.16□□□□□ -0.46
CTC1-202ENST00000449476 SFPQP23246 707 aaKnown RBP eCLIP12.16□□□□□ -0.46
CTC1-202ENST00000449476 UBE2HP62256 183 aa12.16□□□□□ -0.46
CTC1-202ENST00000449476 CWC25Q9NXE8 425 aaPredicted RBP12.16□□□□□ -0.46
CTC1-202ENST00000449476 CCDC196A0A1B0GTZ2 297 aa12.16□□□□□ -0.46
CTC1-202ENST00000449476 GOLGA8BA8MQT2 603 aa12.16□□□□□ -0.46
CTC1-202ENST00000449476 CHRNA2Q15822 529 aa12.16□□□□□ -0.46
CTC1-202ENST00000449476 LDHAL6AQ6ZMR3 332 aa12.16□□□□□ -0.46
CTC1-202ENST00000449476 ANKRD18BA2A2Z9 1011 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms