RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 GNAI1P63096 354 aa9.83□□□□□ -0.84
AC004540.1-206ENST00000448056 GOLGA2Q08379 1002 aa9.83□□□□□ -0.84
AC004540.1-206ENST00000448056 UPF1Q92900 1129 aaKnown RBP eCLIP9.83□□□□□ -0.84
AC004540.1-206ENST00000448056 SMARCC1Q92922 1105 aaPredicted RBP9.83□□□□□ -0.84
AC004540.1-206ENST00000448056 TSPYL4Q9UJ04 414 aa9.83□□□□□ -0.84
AC004540.1-206ENST00000448056 DLG5Q8TDM6 1919 aa9.82□□□□□ -0.84
AC004540.1-206ENST00000448056 SF3B2Q13435 895 aaKnown RBP9.82□□□□□ -0.84
AC004540.1-206ENST00000448056 TTC5Q8N0Z6 440 aa9.82□□□□□ -0.84
AC004540.1-206ENST00000448056 MBIPQ9NS73 344 aa9.82□□□□□ -0.84
AC004540.1-206ENST00000448056 PCDHB8Q9UN66 801 aa9.82□□□□□ -0.84
AC004540.1-206ENST00000448056 PCDHB13Q9Y5F0 798 aa9.82□□□□□ -0.84
AC004540.1-206ENST00000448056 MRC1P22897 1456 aa9.82□□□□□ -0.84
AC004540.1-206ENST00000448056 SCN11AQ9UI33 1791 aa9.82□□□□□ -0.84
AC004540.1-206ENST00000448056 TOGARAM1Q9Y4F4 1720 aa9.82□□□□□ -0.84
AC004540.1-206ENST00000448056 ZBED9Q6R2W3 1325 aa9.82□□□□□ -0.84
AC004540.1-206ENST00000448056 PTCD1O75127 700 aaKnown RBP9.81□□□□□ -0.84
AC004540.1-206ENST00000448056 EIF4A1P60842 406 aaKnown RBP9.81□□□□□ -0.84
AC004540.1-206ENST00000448056 SLFN5Q08AF3 891 aa9.81□□□□□ -0.84
AC004540.1-206ENST00000448056 IFNL1Q8IU54 200 aa9.81□□□□□ -0.84
AC004540.1-206ENST00000448056 CDCA7LQ96GN5 454 aa9.81□□□□□ -0.84
AC004540.1-206ENST00000448056 ZNF496Q96IT1 587 aaPredicted RBP9.81□□□□□ -0.84
AC004540.1-206ENST00000448056 YTHDC1Q96MU7 727 aaKnown RBP9.81□□□□□ -0.84
AC004540.1-206ENST00000448056 KAT6BQ8WYB5 2073 aa9.81□□□□□ -0.84
AC004540.1-206ENST00000448056 PALLDQ8WX93 1383 aa9.8□□□□□ -0.84
AC004540.1-206ENST00000448056 DOT1LQ8TEK3 1739 aa9.8□□□□□ -0.84
AC004540.1-206ENST00000448056 LOC102724428A0A0B4J2F2 783 aa9.8□□□□□ -0.84
AC004540.1-206ENST00000448056 E9PSI1 815 aa9.8□□□□□ -0.84
AC004540.1-206ENST00000448056 SIK1P57059 783 aa9.8□□□□□ -0.84
AC004540.1-206ENST00000448056 TRMT2AQ8IZ69 625 aaKnown RBP9.8□□□□□ -0.84
AC004540.1-206ENST00000448056 TSR2Q969E8 191 aaKnown RBP9.8□□□□□ -0.84
AC004540.1-206ENST00000448056 FMNL2Q96PY5 1086 aa9.8□□□□□ -0.84
AC004540.1-206ENST00000448056 SLC4A9Q96Q91 983 aa9.8□□□□□ -0.84
AC004540.1-206ENST00000448056 CAMKK2Q96RR4 588 aa9.8□□□□□ -0.84
AC004540.1-206ENST00000448056 MYH16Q9H6N6 1097 aa9.8□□□□□ -0.84
AC004540.1-206ENST00000448056 NHSQ6T4R5 1651 aa9.8□□□□□ -0.84
AC004540.1-206ENST00000448056 SBF2Q86WG5 1849 aa9.79□□□□□ -0.84
AC004540.1-206ENST00000448056 BAG6P46379 1132 aa9.79□□□□□ -0.84
AC004540.1-206ENST00000448056 EN1Q05925 392 aaPredicted RBP9.79□□□□□ -0.84
AC004540.1-206ENST00000448056 TXNRD1Q16881 649 aa9.79□□□□□ -0.84
AC004540.1-206ENST00000448056 DEFB132Q7Z7B7 95 aa9.79□□□□□ -0.84
AC004540.1-206ENST00000448056 VSIG10Q8N0Z9 540 aa9.79□□□□□ -0.84
AC004540.1-206ENST00000448056 ITGB4P16144 1822 aa9.79□□□□□ -0.84
AC004540.1-206ENST00000448056 FANCIQ9NVI1 1328 aa9.79□□□□□ -0.84
AC004540.1-206ENST00000448056 HEG1Q9ULI3 1381 aa9.78□□□□□ -0.84
AC004540.1-206ENST00000448056 GIGYF1O75420 1035 aaPredicted RBP9.78□□□□□ -0.84
AC004540.1-206ENST00000448056 SNRPA1P09661 255 aaKnown RBP9.78□□□□□ -0.84
AC004540.1-206ENST00000448056 ATP6V1AP38606 617 aa9.78□□□□□ -0.84
AC004540.1-206ENST00000448056 CLCN6P51797 869 aa9.78□□□□□ -0.84
AC004540.1-206ENST00000448056 KCNQ4P56696 695 aa9.78□□□□□ -0.84
AC004540.1-206ENST00000448056 EZH2Q15910 746 aaKnown RBP9.78□□□□□ -0.84
AC004540.1-206ENST00000448056 SLC27A3Q5K4L6 730 aa9.78□□□□□ -0.84
AC004540.1-206ENST00000448056 HS6ST3Q8IZP7 471 aa9.78□□□□□ -0.84
AC004540.1-206ENST00000448056 C8orf58Q8NAV2 365 aa9.78□□□□□ -0.84
AC004540.1-206ENST00000448056 LRRC4BQ9NT99 713 aa9.78□□□□□ -0.84
AC004540.1-206ENST00000448056 CCNL1Q9UK58 526 aaPredicted RBP9.78□□□□□ -0.84
AC004540.1-206ENST00000448056 ITPK1Q13572 414 aa9.77□□□□□ -0.85
AC004540.1-206ENST00000448056 KRT24Q2M2I5 525 aa9.77□□□□□ -0.85
AC004540.1-206ENST00000448056 DUSP27Q5VZP5 1158 aa9.77□□□□□ -0.85
AC004540.1-206ENST00000448056 BBXQ8WY36 941 aaPredicted RBP9.77□□□□□ -0.85
AC004540.1-206ENST00000448056 TEX13AQ9BXU3 409 aaPredicted RBP9.77□□□□□ -0.85
AC004540.1-206ENST00000448056 SIPA1L3O60292 1781 aaPredicted RBP9.77□□□□□ -0.85
AC004540.1-206ENST00000448056 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.76□□□□□ -0.85
AC004540.1-206ENST00000448056 PRAMEF22A3QJZ6 481 aa9.76□□□□□ -0.85
AC004540.1-206ENST00000448056 ELL2O00472 640 aaPredicted RBP9.76□□□□□ -0.85
AC004540.1-206ENST00000448056 HMGB2P26583 209 aaKnown RBP9.76□□□□□ -0.85
AC004540.1-206ENST00000448056 EXOSC9Q06265 439 aaKnown RBP9.76□□□□□ -0.85
AC004540.1-206ENST00000448056 PDAP1Q13442 181 aaKnown RBP9.76□□□□□ -0.85
AC004540.1-206ENST00000448056 DNAJC10Q8IXB1 793 aa9.76□□□□□ -0.85
AC004540.1-206ENST00000448056 TSPYL6Q8N831 410 aa9.76□□□□□ -0.85
AC004540.1-206ENST00000448056 ZFP91Q96JP5 570 aaPredicted RBP9.76□□□□□ -0.85
AC004540.1-206ENST00000448056 USP16Q9Y5T5 823 aa9.76□□□□□ -0.85
AC004540.1-206ENST00000448056 BTAF1O14981 1849 aa9.76□□□□□ -0.85
AC004540.1-206ENST00000448056 KCPQ6ZWJ8 1503 aa9.76□□□□□ -0.85
AC004540.1-206ENST00000448056 VIRMAQ69YN4 1812 aaKnown RBP9.75□□□□□ -0.85
AC004540.1-206ENST00000448056 VAMP4O75379 141 aa9.75□□□□□ -0.85
AC004540.1-206ENST00000448056 STARD3NLO95772 234 aa9.75□□□□□ -0.85
AC004540.1-206ENST00000448056 HOXB7P09629 217 aa9.75□□□□□ -0.85
AC004540.1-206ENST00000448056 CYP19A1P11511 503 aaPredicted RBP9.75□□□□□ -0.85
AC004540.1-206ENST00000448056 LINC00116Q8NCU8 138 aa9.75□□□□□ -0.85
AC004540.1-206ENST00000448056 EIF2S2P20042 333 aaKnown RBP9.74□□□□□ -0.85
AC004540.1-206ENST00000448056 PSEN1P49768 467 aa9.74□□□□□ -0.85
AC004540.1-206ENST00000448056 TWISTNBQ3B726 338 aaPredicted RBP9.74□□□□□ -0.85
AC004540.1-206ENST00000448056 RC3H1Q5TC82 1133 aaKnown RBP9.74□□□□□ -0.85
AC004540.1-206ENST00000448056 MS4A3Q96HJ5 214 aa9.74□□□□□ -0.85
AC004540.1-206ENST00000448056 SOS1Q07889 1333 aaPredicted RBP9.74□□□□□ -0.85
AC004540.1-206ENST00000448056 TNS1Q9HBL0 1735 aaKnown RBP9.73□□□□□ -0.85
AC004540.1-206ENST00000448056 STK25O00506 426 aa9.73□□□□□ -0.85
AC004540.1-206ENST00000448056 A1BGP04217 495 aa9.73□□□□□ -0.85
AC004540.1-206ENST00000448056 CRKLP46109 303 aaKnown RBP9.73□□□□□ -0.85
AC004540.1-206ENST00000448056 INTS5Q6P9B9 1019 aaKnown RBP9.73□□□□□ -0.85
AC004540.1-206ENST00000448056 CHMP4AQ9BY43 222 aa9.73□□□□□ -0.85
AC004540.1-206ENST00000448056 PAPPAQ13219 1627 aa9.73□□□□□ -0.85
AC004540.1-206ENST00000448056 KDM3BQ7LBC6 1761 aa9.73□□□□□ -0.85
AC004540.1-206ENST00000448056 HDGFL1Q5TGJ6 251 aa9.72□□□□□ -0.85
AC004540.1-206ENST00000448056 NECTIN2Q92692 538 aa9.72□□□□□ -0.85
AC004540.1-206ENST00000448056 CCDC87Q9NVE4 849 aa9.72□□□□□ -0.85
AC004540.1-206ENST00000448056 LY75O60449 1722 aa9.71□□□□□ -0.85
AC004540.1-206ENST00000448056 UBR2Q8IWV8 1755 aa9.71□□□□□ -0.85
AC004540.1-206ENST00000448056 NBPF26B4DH59 902 aa9.71□□□□□ -0.86
AC004540.1-206ENST00000448056 CT47B1P0C2W7 299 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms