RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 HSPA4P34932 840 aa16.68■□□□□ 0.26
VPS52-212ENST00000445902 WAPLQ7Z5K2 1190 aa16.68■□□□□ 0.26
VPS52-212ENST00000445902 NECTIN2Q92692 538 aa16.68■□□□□ 0.26
VPS52-212ENST00000445902 MYO5BQ9ULV0 1848 aa16.68■□□□□ 0.26
VPS52-212ENST00000445902 GNAI2P04899 355 aa16.68■□□□□ 0.26
VPS52-212ENST00000445902 SULT6B1Q6IMI4 303 aa16.68■□□□□ 0.26
VPS52-212ENST00000445902 FAM173BQ6P4H8 233 aa16.68■□□□□ 0.26
VPS52-212ENST00000445902 SNX14Q9Y5W7 946 aa16.68■□□□□ 0.26
VPS52-212ENST00000445902 TPM3P06753 285 aa16.68■□□□□ 0.26
VPS52-212ENST00000445902 GJB2P29033 226 aa16.67■□□□□ 0.26
VPS52-212ENST00000445902 FERMT3Q86UX7 667 aa16.67■□□□□ 0.26
VPS52-212ENST00000445902 KIAA0232Q92628 1395 aa16.67■□□□□ 0.26
VPS52-212ENST00000445902 SPG7Q9UQ90 795 aa16.66■□□□□ 0.26
VPS52-212ENST00000445902 CHL1O00533 1208 aa16.66■□□□□ 0.26
VPS52-212ENST00000445902 CCDC112Q8NEF3 446 aa16.66■□□□□ 0.26
VPS52-212ENST00000445902 TRIM5Q9C035 493 aa16.66■□□□□ 0.26
VPS52-212ENST00000445902 SMTNL1A8MU46 457 aa16.65■□□□□ 0.26
VPS52-212ENST00000445902 LIG1P18858 919 aa16.65■□□□□ 0.26
VPS52-212ENST00000445902 TPD52L1Q16890 204 aaPredicted RBP16.65■□□□□ 0.26
VPS52-212ENST00000445902 FAM200AQ8TCP9 573 aa16.65■□□□□ 0.26
VPS52-212ENST00000445902 LIMCH1Q9UPQ0 1083 aa16.65■□□□□ 0.26
VPS52-212ENST00000445902 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.65■□□□□ 0.26
VPS52-212ENST00000445902 ATP6V1DQ9Y5K8 247 aa16.65■□□□□ 0.26
VPS52-212ENST00000445902 MRVI1Q9Y6F6 885 aa16.65■□□□□ 0.26
VPS52-212ENST00000445902 ERICH4A6NGS2 130 aa16.65■□□□□ 0.26
VPS52-212ENST00000445902 SLFN14P0C7P3 912 aa16.65■□□□□ 0.26
VPS52-212ENST00000445902 CASTP20810 708 aaKnown RBP16.65■□□□□ 0.26
VPS52-212ENST00000445902 TYRO3Q06418 890 aa16.65■□□□□ 0.26
VPS52-212ENST00000445902 DDX41Q9UJV9 622 aaKnown RBP16.65■□□□□ 0.26
VPS52-212ENST00000445902 CPSF1Q10570 1443 aaKnown RBP16.65■□□□□ 0.26
VPS52-212ENST00000445902 NCKAP5LQ9HCH0 1330 aa16.65■□□□□ 0.26
VPS52-212ENST00000445902 SSH2Q76I76 1423 aa16.65■□□□□ 0.26
VPS52-212ENST00000445902 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.65■□□□□ 0.26
VPS52-212ENST00000445902 ANO6Q4KMQ2 910 aa16.65■□□□□ 0.26
VPS52-212ENST00000445902 TTC14Q96N46 770 aa16.65■□□□□ 0.26
VPS52-212ENST00000445902 MTMR6Q9Y217 621 aa16.65■□□□□ 0.26
VPS52-212ENST00000445902 POGZQ7Z3K3 1410 aa16.64■□□□□ 0.25
VPS52-212ENST00000445902 FRMPD1Q5SYB0 1578 aa16.64■□□□□ 0.25
VPS52-212ENST00000445902 KCNJ4P48050 445 aa16.64■□□□□ 0.25
VPS52-212ENST00000445902 ZSCAN25Q6NSZ9 544 aa16.64■□□□□ 0.25
VPS52-212ENST00000445902 CWC27Q6UX04 472 aaKnown RBP16.64■□□□□ 0.25
VPS52-212ENST00000445902 NECAB1Q8N987 351 aa16.64■□□□□ 0.25
VPS52-212ENST00000445902 LRRFIP2Q9Y608 721 aaKnown RBP16.64■□□□□ 0.25
VPS52-212ENST00000445902 CLTCQ00610 1675 aaKnown RBP16.63■□□□□ 0.25
VPS52-212ENST00000445902 MAP3K11Q16584 847 aa16.63■□□□□ 0.25
VPS52-212ENST00000445902 NUP62CLQ9H1M0 184 aa16.63■□□□□ 0.25
VPS52-212ENST00000445902 CBX8Q9HC52 389 aa16.63■□□□□ 0.25
VPS52-212ENST00000445902 NPHP1O15259 732 aa16.63■□□□□ 0.25
VPS52-212ENST00000445902 CCT4P50991 539 aaKnown RBP16.63■□□□□ 0.25
VPS52-212ENST00000445902 HAP1P54257 671 aaPredicted RBP16.63■□□□□ 0.25
VPS52-212ENST00000445902 TTC6Q86TZ1 520 aa16.63■□□□□ 0.25
VPS52-212ENST00000445902 KIF18AQ8NI77 898 aa16.63■□□□□ 0.25
VPS52-212ENST00000445902 ST7Q9NRC1 585 aa16.62■□□□□ 0.25
VPS52-212ENST00000445902 RAD50Q92878 1312 aa16.62■□□□□ 0.25
VPS52-212ENST00000445902 UHRF1BP1LA0JNW5 1464 aa16.62■□□□□ 0.25
VPS52-212ENST00000445902 SOX12O15370 315 aa16.62■□□□□ 0.25
VPS52-212ENST00000445902 GABPB1Q06547 395 aaPredicted RBP16.62■□□□□ 0.25
VPS52-212ENST00000445902 RTF1Q92541 710 aaKnown RBP16.62■□□□□ 0.25
VPS52-212ENST00000445902 CDK12Q9NYV4 1490 aaPredicted RBP16.62■□□□□ 0.25
VPS52-212ENST00000445902 HECW2Q9P2P5 1572 aa16.62■□□□□ 0.25
VPS52-212ENST00000445902 CACTINQ8WUQ7 758 aaKnown RBP16.62■□□□□ 0.25
VPS52-212ENST00000445902 COG3Q96JB2 828 aa16.62■□□□□ 0.25
VPS52-212ENST00000445902 FOXO3O43524 673 aa16.61■□□□□ 0.25
VPS52-212ENST00000445902 PDE4CQ08493 712 aa16.61■□□□□ 0.25
VPS52-212ENST00000445902 TAF3Q5VWG9 929 aa16.61■□□□□ 0.25
VPS52-212ENST00000445902 PIK3C2BO00750 1634 aa16.61■□□□□ 0.25
VPS52-212ENST00000445902 USP27XA6NNY8 438 aa16.61■□□□□ 0.25
VPS52-212ENST00000445902 ARID5BQ14865 1188 aa16.61■□□□□ 0.25
VPS52-212ENST00000445902 CCDC144BQ3MJ40 725 aa16.61■□□□□ 0.25
VPS52-212ENST00000445902 CCDC144CPQ8IYA2 1237 aa16.61■□□□□ 0.25
VPS52-212ENST00000445902 TNMDQ9H2S6 317 aa16.61■□□□□ 0.25
VPS52-212ENST00000445902 DACT1Q9NYF0 836 aa16.61■□□□□ 0.25
VPS52-212ENST00000445902 ASXL2Q76L83 1435 aa16.6■□□□□ 0.25
VPS52-212ENST00000445902 CDK11BP21127 795 aaKnown RBP16.6■□□□□ 0.25
VPS52-212ENST00000445902 ADCK5Q3MIX3 580 aa16.6■□□□□ 0.25
VPS52-212ENST00000445902 KMT5BQ4FZB7 885 aa16.6■□□□□ 0.25
VPS52-212ENST00000445902 TFIP11Q9UBB9 837 aaKnown RBP16.6■□□□□ 0.25
VPS52-212ENST00000445902 SGSM2O43147 1006 aa16.6■□□□□ 0.25
VPS52-212ENST00000445902 ZNF75DP51815 510 aa16.6■□□□□ 0.25
VPS52-212ENST00000445902 TERF2Q15554 542 aa16.6■□□□□ 0.25
VPS52-212ENST00000445902 LSG1Q9H089 658 aaKnown RBP16.6■□□□□ 0.25
VPS52-212ENST00000445902 STAP2Q9UGK3 403 aa16.6■□□□□ 0.25
VPS52-212ENST00000445902 TSPYL4Q9UJ04 414 aa16.6■□□□□ 0.25
VPS52-212ENST00000445902 ATP8B2P98198 1209 aa16.59■□□□□ 0.25
VPS52-212ENST00000445902 CEP135Q66GS9 1140 aa16.59■□□□□ 0.25
VPS52-212ENST00000445902 JAKMIP1Q96N16 626 aaKnown RBP16.59■□□□□ 0.25
VPS52-212ENST00000445902 HYPKQ9NX55 129 aa16.59■□□□□ 0.25
VPS52-212ENST00000445902 CLIP2Q9UDT6 1046 aa16.59■□□□□ 0.25
VPS52-212ENST00000445902 ZNF215Q9UL58 517 aaPredicted RBP16.59■□□□□ 0.25
VPS52-212ENST00000445902 MORC2Q9Y6X9 1032 aaPredicted RBP16.59■□□□□ 0.25
VPS52-212ENST00000445902 CDC37L1Q7L3B6 337 aa16.59■□□□□ 0.25
VPS52-212ENST00000445902 DNAJC25Q9H1X3 360 aa16.59■□□□□ 0.25
VPS52-212ENST00000445902 EIF4A2Q14240 407 aaKnown RBP16.59■□□□□ 0.25
VPS52-212ENST00000445902 TRERF1Q96PN7 1200 aa16.59■□□□□ 0.25
VPS52-212ENST00000445902 IRX5P78411 483 aaPredicted RBP16.58■□□□□ 0.24
VPS52-212ENST00000445902 KRT222Q8N1A0 295 aa16.58■□□□□ 0.24
VPS52-212ENST00000445902 IL17RAQ96F46 866 aa16.58■□□□□ 0.24
VPS52-212ENST00000445902 GOLGA6L4A6NEF3 574 aa16.58■□□□□ 0.24
VPS52-212ENST00000445902 ST3GAL1Q11201 340 aa16.58■□□□□ 0.24
VPS52-212ENST00000445902 PRPF40BQ6NWY9 871 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms