RNA–Protein interactions for RNA: ENST00000444265.6

CASC15-201, Transcript of cancer susceptibility 15, humanhuman

TSL 1 (best) BASIC

Gene CASC15, Length 1,497 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC15-201ENST00000444265 COL25A1Q9BXS0 654 aaPredicted RBP10.36□□□□□ -0.75
CASC15-201ENST00000444265 PRDM6Q9NQX0 595 aa10.36□□□□□ -0.75
CASC15-201ENST00000444265 PCDH11XQ9BZA7 1347 aa10.35□□□□□ -0.75
CASC15-201ENST00000444265 PCDH11YQ9BZA8 1340 aa10.35□□□□□ -0.75
CASC15-201ENST00000444265 LTBP3Q9NS15 1303 aa10.35□□□□□ -0.75
CASC15-201ENST00000444265 TRPA1O75762 1119 aa10.35□□□□□ -0.75
CASC15-201ENST00000444265 TATP17735 454 aaPredicted RBP10.35□□□□□ -0.75
CASC15-201ENST00000444265 FKBP8Q14318 412 aa10.35□□□□□ -0.75
CASC15-201ENST00000444265 IP6K1Q92551 441 aa10.35□□□□□ -0.75
CASC15-201ENST00000444265 NFAT5O94916 1531 aa10.34□□□□□ -0.75
CASC15-201ENST00000444265 POLRMTO00411 1230 aaKnown RBP10.34□□□□□ -0.75
CASC15-201ENST00000444265 FMR1Q06787 632 aaKnown RBP eCLIP10.34□□□□□ -0.75
CASC15-201ENST00000444265 ZNF622Q969S3 477 aaKnown RBP eCLIP10.34□□□□□ -0.75
CASC15-201ENST00000444265 CELF2O95319 508 aaKnown RBP10.33□□□□□ -0.76
CASC15-201ENST00000444265 SMG6Q86US8 1419 aaKnown RBP10.33□□□□□ -0.76
CASC15-201ENST00000444265 RNF123Q5XPI4 1314 aa10.32□□□□□ -0.76
CASC15-201ENST00000444265 TRAF5O00463 557 aa10.32□□□□□ -0.76
CASC15-201ENST00000444265 LMOD1P29536 600 aaPredicted RBP10.32□□□□□ -0.76
CASC15-201ENST00000444265 SOGA3Q5TF21 947 aa10.32□□□□□ -0.76
CASC15-201ENST00000444265 RNF186Q9NXI6 227 aa10.32□□□□□ -0.76
CASC15-201ENST00000444265 TMOD3Q9NYL9 352 aa10.32□□□□□ -0.76
CASC15-201ENST00000444265 SCN4AP35499 1836 aa10.32□□□□□ -0.76
CASC15-201ENST00000444265 MEGF6O75095 1541 aa10.32□□□□□ -0.76
CASC15-201ENST00000444265 TM4SF1P30408 202 aa10.31□□□□□ -0.76
CASC15-201ENST00000444265 STAC3Q96MF2 364 aa10.31□□□□□ -0.76
CASC15-201ENST00000444265 SRP68Q9UHB9 627 aaKnown RBP10.31□□□□□ -0.76
CASC15-201ENST00000444265 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.3□□□□□ -0.76
CASC15-201ENST00000444265 ASAP1Q9ULH1 1129 aa10.3□□□□□ -0.76
CASC15-201ENST00000444265 PDZRN3Q9UPQ7 1066 aa10.3□□□□□ -0.76
CASC15-201ENST00000444265 ZPR1O75312 459 aa10.3□□□□□ -0.76
CASC15-201ENST00000444265 COL9A1P20849 921 aa10.3□□□□□ -0.76
CASC15-201ENST00000444265 INTS3Q68E01 1043 aaKnown RBP10.3□□□□□ -0.76
CASC15-201ENST00000444265 FBXO46Q6PJ61 603 aaPredicted RBP10.3□□□□□ -0.76
CASC15-201ENST00000444265 DCAF11Q8TEB1 546 aa10.3□□□□□ -0.76
CASC15-201ENST00000444265 CCDC88AQ3V6T2 1871 aa10.29□□□□□ -0.76
CASC15-201ENST00000444265 USP31Q70CQ4 1352 aa10.29□□□□□ -0.76
CASC15-201ENST00000444265 CNTNAP4Q9C0A0 1308 aa10.29□□□□□ -0.76
CASC15-201ENST00000444265 CHRDL2Q6WN34 429 aa10.29□□□□□ -0.76
CASC15-201ENST00000444265 ANKRD13DQ6ZTN6 518 aa10.29□□□□□ -0.76
CASC15-201ENST00000444265 SYNE4Q8N205 404 aa10.29□□□□□ -0.76
CASC15-201ENST00000444265 FAM122AQ96E09 287 aa10.29□□□□□ -0.76
CASC15-201ENST00000444265 OTUD5Q96G74 571 aa10.29□□□□□ -0.76
CASC15-201ENST00000444265 ZIC5Q96T25 663 aa10.29□□□□□ -0.76
CASC15-201ENST00000444265 MPHOSPH9Q99550 1183 aa10.29□□□□□ -0.76
CASC15-201ENST00000444265 RBM42Q9BTD8 480 aaKnown RBP10.29□□□□□ -0.76
CASC15-201ENST00000444265 CD163L1Q9NR16 1453 aa10.28□□□□□ -0.76
CASC15-201ENST00000444265 MAP3K19Q56UN5 1328 aa10.28□□□□□ -0.76
CASC15-201ENST00000444265 USP42Q9H9J4 1324 aaKnown RBP10.28□□□□□ -0.76
CASC15-201ENST00000444265 AMPHP49418 695 aa10.28□□□□□ -0.76
CASC15-201ENST00000444265 USP50Q70EL3 339 aaPredicted RBP10.28□□□□□ -0.76
CASC15-201ENST00000444265 GPC2Q8N158 579 aa10.28□□□□□ -0.76
CASC15-201ENST00000444265 CCDC102AQ96A19 550 aa10.28□□□□□ -0.76
CASC15-201ENST00000444265 ZNF408Q9H9D4 720 aa10.28□□□□□ -0.76
CASC15-201ENST00000444265 ZNF541Q9H0D2 1346 aa10.27□□□□□ -0.76
CASC15-201ENST00000444265 H0YGN5 161 aa10.27□□□□□ -0.77
CASC15-201ENST00000444265 KIF23Q02241 960 aaPredicted RBP10.27□□□□□ -0.77
CASC15-201ENST00000444265 KTN1Q86UP2 1357 aaKnown RBP10.27□□□□□ -0.77
CASC15-201ENST00000444265 CYP27B1O15528 508 aa10.26□□□□□ -0.77
CASC15-201ENST00000444265 SERPINB2P05120 415 aa10.26□□□□□ -0.77
CASC15-201ENST00000444265 PDE6BP35913 854 aa10.26□□□□□ -0.77
CASC15-201ENST00000444265 HUNKP57058 714 aa10.26□□□□□ -0.77
CASC15-201ENST00000444265 CNKSR1Q969H4 720 aa10.26□□□□□ -0.77
CASC15-201ENST00000444265 ATG3Q9NT62 314 aa10.26□□□□□ -0.77
CASC15-201ENST00000444265 INSRP06213 1382 aa10.26□□□□□ -0.77
CASC15-201ENST00000444265 PLA2G5P39877 138 aa10.25□□□□□ -0.77
CASC15-201ENST00000444265 REM2Q8IYK8 340 aaPredicted RBP10.25□□□□□ -0.77
CASC15-201ENST00000444265 CENPJQ9HC77 1338 aaPredicted RBP10.25□□□□□ -0.77
CASC15-201ENST00000444265 POTEFA5A3E0 1075 aa10.24□□□□□ -0.77
CASC15-201ENST00000444265 NBPF6Q5VWK0 638 aa10.24□□□□□ -0.77
CASC15-201ENST00000444265 RGMBQ6NW40 437 aa10.24□□□□□ -0.77
CASC15-201ENST00000444265 NME9Q86XW9 330 aa10.24□□□□□ -0.77
CASC15-201ENST00000444265 NBPF4Q96M43 638 aa10.24□□□□□ -0.77
CASC15-201ENST00000444265 RBM27Q9P2N5 1060 aaKnown RBP10.24□□□□□ -0.77
CASC15-201ENST00000444265 GJA3Q9Y6H8 435 aa10.24□□□□□ -0.77
CASC15-201ENST00000444265 ADAMTSL1Q8N6G6 1762 aa10.24□□□□□ -0.77
CASC15-201ENST00000444265 EIF6P56537 245 aaKnown RBP10.23□□□□□ -0.77
CASC15-201ENST00000444265 NKX1-1Q15270 411 aaPredicted RBP10.23□□□□□ -0.77
CASC15-201ENST00000444265 CCDC24Q8N4L8 307 aa10.23□□□□□ -0.77
CASC15-201ENST00000444265 USHBP1Q8N6Y0 703 aa10.23□□□□□ -0.77
CASC15-201ENST00000444265 DICER1Q9UPY3 1922 aaKnown RBP10.23□□□□□ -0.77
CASC15-201ENST00000444265 EVC2Q86UK5 1308 aa10.23□□□□□ -0.77
CASC15-201ENST00000444265 FZD9O00144 591 aa10.23□□□□□ -0.77
CASC15-201ENST00000444265 HOXC9P31274 260 aa10.23□□□□□ -0.77
CASC15-201ENST00000444265 NFIXQ14938 502 aa10.23□□□□□ -0.77
CASC15-201ENST00000444265 USPL1Q5W0Q7 1092 aa10.23□□□□□ -0.77
CASC15-201ENST00000444265 ZNF296Q8WUU4 475 aaPredicted RBP10.23□□□□□ -0.77
CASC15-201ENST00000444265 JDP2Q8WYK2 163 aa10.23□□□□□ -0.77
CASC15-201ENST00000444265 CEP290O15078 2479 aa10.22□□□□□ -0.77
CASC15-201ENST00000444265 EPS15P42566 896 aa10.22□□□□□ -0.77
CASC15-201ENST00000444265 ZNF157P51786 506 aaPredicted RBP10.22□□□□□ -0.77
CASC15-201ENST00000444265 CCDC93Q567U6 631 aa10.22□□□□□ -0.77
CASC15-201ENST00000444265 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.22□□□□□ -0.77
CASC15-201ENST00000444265 ZNF277Q9NRM2 450 aaPredicted RBP10.22□□□□□ -0.77
CASC15-201ENST00000444265 SPG7Q9UQ90 795 aa10.22□□□□□ -0.77
CASC15-201ENST00000444265 EN2P19622 333 aaPredicted RBP10.21□□□□□ -0.78
CASC15-201ENST00000444265 CRKLP46109 303 aaKnown RBP10.21□□□□□ -0.78
CASC15-201ENST00000444265 FKBP4Q02790 459 aaKnown RBP eCLIP10.21□□□□□ -0.78
CASC15-201ENST00000444265 CSRNP1Q96S65 589 aa10.21□□□□□ -0.78
CASC15-201ENST00000444265 BRIP1Q9BX63 1249 aa10.21□□□□□ -0.78
CASC15-201ENST00000444265 STXBP5LQ9Y2K9 1186 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms