RNA–Protein interactions for RNA: ENST00000434667.3

SCAF4-203, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 3,846 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-203ENST00000434667 SPG7Q9UQ90 795 aa12.65□□□□□ -0.38
SCAF4-203ENST00000434667 RIMS2Q9UQ26 1411 aa12.65□□□□□ -0.39
SCAF4-203ENST00000434667 KDM3BQ7LBC6 1761 aa12.64□□□□□ -0.39
SCAF4-203ENST00000434667 FERMT3Q86UX7 667 aa12.64□□□□□ -0.39
SCAF4-203ENST00000434667 CHMP4BQ9H444 224 aaKnown RBP12.64□□□□□ -0.39
SCAF4-203ENST00000434667 NAP1L2Q9ULW6 460 aaPredicted RBP12.64□□□□□ -0.39
SCAF4-203ENST00000434667 FER1L4A9Z1Z3 1794 aa12.64□□□□□ -0.39
SCAF4-203ENST00000434667 RGS12O14924 1447 aa12.64□□□□□ -0.39
SCAF4-203ENST00000434667 RPAP2Q8IXW5 612 aaPredicted RBP12.64□□□□□ -0.39
SCAF4-203ENST00000434667 ZSCAN20P17040 1043 aaPredicted RBP12.63□□□□□ -0.39
SCAF4-203ENST00000434667 CHMLP26374 656 aa12.63□□□□□ -0.39
SCAF4-203ENST00000434667 MLECQ14165 292 aa12.63□□□□□ -0.39
SCAF4-203ENST00000434667 SIRT1Q96EB6 747 aa12.63□□□□□ -0.39
SCAF4-203ENST00000434667 BCL2L12Q9HB09 334 aa12.63□□□□□ -0.39
SCAF4-203ENST00000434667 LMTK3Q96Q04 1460 aa12.63□□□□□ -0.39
SCAF4-203ENST00000434667 MBD3O95983 291 aa12.63□□□□□ -0.39
SCAF4-203ENST00000434667 RASEFQ8IZ41 740 aa12.63□□□□□ -0.39
SCAF4-203ENST00000434667 MYRIPQ8NFW9 859 aa12.63□□□□□ -0.39
SCAF4-203ENST00000434667 TCEANC2Q96MN5 208 aa12.63□□□□□ -0.39
SCAF4-203ENST00000434667 CACNA1FO60840 1977 aa12.63□□□□□ -0.39
SCAF4-203ENST00000434667 FBXW7Q969H0 707 aa12.63□□□□□ -0.39
SCAF4-203ENST00000434667 ZBTB9Q96C00 473 aa12.63□□□□□ -0.39
SCAF4-203ENST00000434667 CCDC94Q9BW85 323 aaPredicted RBP12.63□□□□□ -0.39
SCAF4-203ENST00000434667 MX1P20591 662 aa12.62□□□□□ -0.39
SCAF4-203ENST00000434667 DNM1Q05193 864 aaKnown RBP12.62□□□□□ -0.39
SCAF4-203ENST00000434667 ZNF771Q7L3S4 317 aaPredicted RBP12.62□□□□□ -0.39
SCAF4-203ENST00000434667 KCNF1Q9H3M0 494 aa12.62□□□□□ -0.39
SCAF4-203ENST00000434667 CHAF1AQ13111 956 aaPredicted RBP12.62□□□□□ -0.39
SCAF4-203ENST00000434667 EIF4A2Q14240 407 aaKnown RBP12.62□□□□□ -0.39
SCAF4-203ENST00000434667 LRRFIP2Q9Y608 721 aaKnown RBP12.62□□□□□ -0.39
SCAF4-203ENST00000434667 TERF1P54274 439 aa12.61□□□□□ -0.39
SCAF4-203ENST00000434667 LRMPQ12912 555 aa12.61□□□□□ -0.39
SCAF4-203ENST00000434667 FKBP5Q13451 457 aaPredicted RBP12.61□□□□□ -0.39
SCAF4-203ENST00000434667 NECAB1Q8N987 351 aa12.61□□□□□ -0.39
SCAF4-203ENST00000434667 TRERF1Q96PN7 1200 aa12.61□□□□□ -0.39
SCAF4-203ENST00000434667 RIOK3O14730 519 aaKnown RBP12.61□□□□□ -0.39
SCAF4-203ENST00000434667 COG3Q96JB2 828 aa12.61□□□□□ -0.39
SCAF4-203ENST00000434667 EDC4Q6P2E9 1401 aaKnown RBP12.61□□□□□ -0.39
SCAF4-203ENST00000434667 CWC27Q6UX04 472 aaKnown RBP12.61□□□□□ -0.39
SCAF4-203ENST00000434667 CCDC83Q8IWF9 413 aa12.61□□□□□ -0.39
SCAF4-203ENST00000434667 A0A087WWV3 80 aa12.6□□□□□ -0.39
SCAF4-203ENST00000434667 VPS37CA5D8V6 355 aaPredicted RBP12.6□□□□□ -0.39
SCAF4-203ENST00000434667 CKAP2LQ8IYA6 745 aa12.6□□□□□ -0.39
SCAF4-203ENST00000434667 PIBF1Q8WXW3 757 aa12.6□□□□□ -0.39
SCAF4-203ENST00000434667 NRBP1Q9UHY1 535 aa12.6□□□□□ -0.39
SCAF4-203ENST00000434667 TSPYL4Q9UJ04 414 aa12.6□□□□□ -0.39
SCAF4-203ENST00000434667 PPFIA3O75145 1194 aa12.6□□□□□ -0.39
SCAF4-203ENST00000434667 MAP7D2Q96T17 732 aa12.6□□□□□ -0.39
SCAF4-203ENST00000434667 LRRCC1Q9C099 1032 aa12.6□□□□□ -0.39
SCAF4-203ENST00000434667 KCNJ4P48050 445 aa12.6□□□□□ -0.39
SCAF4-203ENST00000434667 AK2P54819 239 aa12.6□□□□□ -0.39
SCAF4-203ENST00000434667 SYT1P21579 422 aa12.59□□□□□ -0.39
SCAF4-203ENST00000434667 CUL4AQ13619 759 aa12.59□□□□□ -0.39
SCAF4-203ENST00000434667 TRPM3Q9HCF6 1732 aaPredicted RBP12.59□□□□□ -0.39
SCAF4-203ENST00000434667 ANXA1P04083 346 aa12.59□□□□□ -0.39
SCAF4-203ENST00000434667 PTGS1P23219 599 aa12.59□□□□□ -0.39
SCAF4-203ENST00000434667 SMAP1Q8IYB5 467 aaPredicted RBP12.59□□□□□ -0.39
SCAF4-203ENST00000434667 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.59□□□□□ -0.39
SCAF4-203ENST00000434667 V9GYY5 206 aaPredicted RBP12.59□□□□□ -0.39
SCAF4-203ENST00000434667 ZBTB22O15209 634 aa12.59□□□□□ -0.39
SCAF4-203ENST00000434667 KIF3AQ9Y496 699 aa12.59□□□□□ -0.39
SCAF4-203ENST00000434667 RPAP1Q9BWH6 1393 aaPredicted RBP12.59□□□□□ -0.39
SCAF4-203ENST00000434667 GOLGA6L4A6NEF3 574 aa12.58□□□□□ -0.4
SCAF4-203ENST00000434667 LUZP1Q86V48 1076 aa12.58□□□□□ -0.4
SCAF4-203ENST00000434667 C16orf45Q96MC5 204 aaPredicted RBP12.58□□□□□ -0.4
SCAF4-203ENST00000434667 PTPRUQ92729 1446 aa12.58□□□□□ -0.4
SCAF4-203ENST00000434667 CHL1O00533 1208 aa12.58□□□□□ -0.4
SCAF4-203ENST00000434667 LTN1O94822 1766 aa12.58□□□□□ -0.4
SCAF4-203ENST00000434667 NUTM2GQ5VZR2 741 aa12.58□□□□□ -0.4
SCAF4-203ENST00000434667 USP31Q70CQ4 1352 aa12.58□□□□□ -0.4
SCAF4-203ENST00000434667 ADCK5Q3MIX3 580 aa12.58□□□□□ -0.4
SCAF4-203ENST00000434667 RUFY3Q7L099 469 aa12.58□□□□□ -0.4
SCAF4-203ENST00000434667 GNAI2P04899 355 aa12.57□□□□□ -0.4
SCAF4-203ENST00000434667 MCCP23508 829 aa12.57□□□□□ -0.4
SCAF4-203ENST00000434667 MCM5P33992 734 aa12.57□□□□□ -0.4
SCAF4-203ENST00000434667 SYAP1Q96A49 352 aaPredicted RBP12.57□□□□□ -0.4
SCAF4-203ENST00000434667 METP08581 1390 aa12.57□□□□□ -0.4
SCAF4-203ENST00000434667 HMMRO75330 724 aa12.57□□□□□ -0.4
SCAF4-203ENST00000434667 TFIP11Q9UBB9 837 aaKnown RBP12.57□□□□□ -0.4
SCAF4-203ENST00000434667 KDM4AO75164 1064 aa12.57□□□□□ -0.4
SCAF4-203ENST00000434667 FOSBP53539 338 aa12.57□□□□□ -0.4
SCAF4-203ENST00000434667 LTV1Q96GA3 475 aaPredicted RBP12.57□□□□□ -0.4
SCAF4-203ENST00000434667 SURF6O75683 361 aaKnown RBP12.56□□□□□ -0.4
SCAF4-203ENST00000434667 CASTP20810 708 aaKnown RBP12.56□□□□□ -0.4
SCAF4-203ENST00000434667 DMTNQ08495 405 aa12.56□□□□□ -0.4
SCAF4-203ENST00000434667 MTHFSDQ2M296 383 aaKnown RBP12.56□□□□□ -0.4
SCAF4-203ENST00000434667 CCDC183Q5T5S1 534 aa12.56□□□□□ -0.4
SCAF4-203ENST00000434667 NUDT16Q96DE0 195 aaKnown RBP12.56□□□□□ -0.4
SCAF4-203ENST00000434667 STX6O43752 255 aa12.56□□□□□ -0.4
SCAF4-203ENST00000434667 C14orf37Q86TY3 774 aa12.56□□□□□ -0.4
SCAF4-203ENST00000434667 PDCL2Q8N4E4 241 aa12.56□□□□□ -0.4
SCAF4-203ENST00000434667 SYTL4Q96C24 671 aaPredicted RBP12.56□□□□□ -0.4
SCAF4-203ENST00000434667 PHAXQ9H814 394 aaKnown RBP12.56□□□□□ -0.4
SCAF4-203ENST00000434667 SNX14Q9Y5W7 946 aa12.56□□□□□ -0.4
SCAF4-203ENST00000434667 NCAPD2Q15021 1401 aa12.56□□□□□ -0.4
SCAF4-203ENST00000434667 WDR33Q9C0J8 1336 aaKnown RBP12.56□□□□□ -0.4
SCAF4-203ENST00000434667 LMOD3Q0VAK6 560 aa12.56□□□□□ -0.4
SCAF4-203ENST00000434667 ZSCAN22P10073 491 aaPredicted RBP12.55□□□□□ -0.4
SCAF4-203ENST00000434667 EIF2S2P20042 333 aaKnown RBP12.55□□□□□ -0.4
SCAF4-203ENST00000434667 LIG1P18858 919 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms