RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 CARD14Q9BXL6 1004 aa10□□□□□ -0.81
VTI1A-202ENST00000432306 TSR1Q2NL82 804 aaKnown RBP9.99□□□□□ -0.81
VTI1A-202ENST00000432306 TMEM121BQ9BXQ6 578 aaPredicted RBP9.99□□□□□ -0.81
VTI1A-202ENST00000432306 METP08581 1390 aa9.99□□□□□ -0.81
VTI1A-202ENST00000432306 BRWD3Q6RI45 1802 aa9.99□□□□□ -0.81
VTI1A-202ENST00000432306 NSD2O96028 1365 aa9.99□□□□□ -0.81
VTI1A-202ENST00000432306 KIF16BQ96L93 1317 aa9.99□□□□□ -0.81
VTI1A-202ENST00000432306 DSG2Q14126 1118 aa9.99□□□□□ -0.81
VTI1A-202ENST00000432306 RAB3GAP1Q15042 981 aa9.99□□□□□ -0.81
VTI1A-202ENST00000432306 HS1BP3Q53T59 392 aa9.99□□□□□ -0.81
VTI1A-202ENST00000432306 ANAPC15P60006 121 aa9.98□□□□□ -0.81
VTI1A-202ENST00000432306 SF3B2Q13435 895 aaKnown RBP9.98□□□□□ -0.81
VTI1A-202ENST00000432306 HSCBQ8IWL3 235 aa9.98□□□□□ -0.81
VTI1A-202ENST00000432306 GJD4Q96KN9 370 aaPredicted RBP9.98□□□□□ -0.81
VTI1A-202ENST00000432306 PDCL3Q9H2J4 239 aa9.98□□□□□ -0.81
VTI1A-202ENST00000432306 BOLA1Q9Y3E2 137 aa9.98□□□□□ -0.81
VTI1A-202ENST00000432306 BCL9LQ86UU0 1499 aa9.97□□□□□ -0.81
VTI1A-202ENST00000432306 ERBB4Q15303 1308 aa9.97□□□□□ -0.81
VTI1A-202ENST00000432306 KIF1BO60333 1816 aa9.97□□□□□ -0.81
VTI1A-202ENST00000432306 ZKSCAN2Q63HK3 967 aa9.97□□□□□ -0.81
VTI1A-202ENST00000432306 POM121Q96HA1 1249 aa9.97□□□□□ -0.81
VTI1A-202ENST00000432306 USTQ9Y2C2 406 aa9.97□□□□□ -0.81
VTI1A-202ENST00000432306 IFT172Q9UG01 1749 aa9.96□□□□□ -0.81
VTI1A-202ENST00000432306 IL16Q14005 1332 aa9.96□□□□□ -0.81
VTI1A-202ENST00000432306 CCDC173Q0VFZ6 552 aa9.96□□□□□ -0.81
VTI1A-202ENST00000432306 POTEHQ6S545 545 aa9.96□□□□□ -0.81
VTI1A-202ENST00000432306 TCP11L2Q8N4U5 519 aa9.96□□□□□ -0.81
VTI1A-202ENST00000432306 GBP4Q96PP9 640 aa9.96□□□□□ -0.81
VTI1A-202ENST00000432306 ORAI2Q96SN7 254 aa9.96□□□□□ -0.81
VTI1A-202ENST00000432306 KIAA1522Q9P206 1035 aaPredicted RBP9.96□□□□□ -0.81
VTI1A-202ENST00000432306 EP400Q96L91 3159 aa9.96□□□□□ -0.82
VTI1A-202ENST00000432306 NPHP3Q7Z494 1330 aa9.96□□□□□ -0.82
VTI1A-202ENST00000432306 PLCG2P16885 1265 aa9.96□□□□□ -0.82
VTI1A-202ENST00000432306 DZIP1LQ8IYY4 767 aaKnown RBP9.96□□□□□ -0.82
VTI1A-202ENST00000432306 EMILIN3Q9NT22 766 aa9.96□□□□□ -0.82
VTI1A-202ENST00000432306 DDX19BQ9UMR2 479 aa9.96□□□□□ -0.82
VTI1A-202ENST00000432306 COLQQ9Y215 455 aaPredicted RBP9.96□□□□□ -0.82
VTI1A-202ENST00000432306 IVNS1ABPQ9Y6Y0 642 aa9.96□□□□□ -0.82
VTI1A-202ENST00000432306 ABCC11Q96J66 1382 aa9.95□□□□□ -0.82
VTI1A-202ENST00000432306 PPME1Q9Y570 386 aa9.95□□□□□ -0.82
VTI1A-202ENST00000432306 NEXMIFQ5QGS0 1516 aa9.94□□□□□ -0.82
VTI1A-202ENST00000432306 TNPO1Q92973 898 aaKnown RBP9.94□□□□□ -0.82
VTI1A-202ENST00000432306 MRRFQ96E11 262 aaKnown RBP9.94□□□□□ -0.82
VTI1A-202ENST00000432306 GLI3P10071 1580 aa9.94□□□□□ -0.82
VTI1A-202ENST00000432306 KIF3CO14782 793 aa9.93□□□□□ -0.82
VTI1A-202ENST00000432306 OFD1O75665 1012 aa9.93□□□□□ -0.82
VTI1A-202ENST00000432306 FOXK1P85037 733 aa9.93□□□□□ -0.82
VTI1A-202ENST00000432306 BMP2KLQ5H9B9 411 aa9.93□□□□□ -0.82
VTI1A-202ENST00000432306 GORABQ5T7V8 394 aa9.93□□□□□ -0.82
VTI1A-202ENST00000432306 DEFB132Q7Z7B7 95 aa9.93□□□□□ -0.82
VTI1A-202ENST00000432306 ZSCAN30Q86W11 494 aa9.93□□□□□ -0.82
VTI1A-202ENST00000432306 GAS2L3Q86XJ1 694 aa9.93□□□□□ -0.82
VTI1A-202ENST00000432306 UNC5CLQ8IV45 518 aa9.93□□□□□ -0.82
VTI1A-202ENST00000432306 TMC2Q8TDI7 906 aa9.93□□□□□ -0.82
VTI1A-202ENST00000432306 TRIM44Q96DX7 344 aaPredicted RBP9.93□□□□□ -0.82
VTI1A-202ENST00000432306 PCMTD1Q96MG8 357 aaPredicted RBP9.93□□□□□ -0.82
VTI1A-202ENST00000432306 MAP7D2Q96T17 732 aa9.93□□□□□ -0.82
VTI1A-202ENST00000432306 NSD3Q9BZ95 1437 aa9.93□□□□□ -0.82
VTI1A-202ENST00000432306 C2orf72A6NCS6 295 aa9.93□□□□□ -0.82
VTI1A-202ENST00000432306 TCF3P15923 654 aa9.93□□□□□ -0.82
VTI1A-202ENST00000432306 NUCB1Q02818 461 aa9.93□□□□□ -0.82
VTI1A-202ENST00000432306 KLHL40Q2TBA0 621 aa9.93□□□□□ -0.82
VTI1A-202ENST00000432306 UBXN4Q92575 508 aa9.93□□□□□ -0.82
VTI1A-202ENST00000432306 SIRT1Q96EB6 747 aa9.93□□□□□ -0.82
VTI1A-202ENST00000432306 DCBLD2Q96PD2 775 aa9.93□□□□□ -0.82
VTI1A-202ENST00000432306 ZBTB40Q9NUA8 1239 aa9.93□□□□□ -0.82
VTI1A-202ENST00000432306 PXDNQ92626 1479 aa9.92□□□□□ -0.82
VTI1A-202ENST00000432306 POTEFA5A3E0 1075 aa9.92□□□□□ -0.82
VTI1A-202ENST00000432306 TPD52L2O43399 206 aaKnown RBP9.92□□□□□ -0.82
VTI1A-202ENST00000432306 ZNF445P59923 1031 aa9.92□□□□□ -0.82
VTI1A-202ENST00000432306 CALD1Q05682 793 aaKnown RBP9.92□□□□□ -0.82
VTI1A-202ENST00000432306 KIF2CQ99661 725 aa9.92□□□□□ -0.82
VTI1A-202ENST00000432306 TNNQ9UQP3 1299 aa9.92□□□□□ -0.82
VTI1A-202ENST00000432306 SLIT2O94813 1529 aa9.92□□□□□ -0.82
VTI1A-202ENST00000432306 ADGRB1O14514 1584 aa9.91□□□□□ -0.82
VTI1A-202ENST00000432306 CDC42BPGQ6DT37 1551 aa9.91□□□□□ -0.82
VTI1A-202ENST00000432306 PPIP5K1Q6PFW1 1433 aa9.91□□□□□ -0.82
VTI1A-202ENST00000432306 DPYSL4O14531 572 aa9.91□□□□□ -0.82
VTI1A-202ENST00000432306 TRIM27P14373 513 aa9.91□□□□□ -0.82
VTI1A-202ENST00000432306 ESCO1Q5FWF5 840 aa9.91□□□□□ -0.82
VTI1A-202ENST00000432306 TMEM92Q6UXU6 159 aa9.91□□□□□ -0.82
VTI1A-202ENST00000432306 ATF7IPQ6VMQ6 1270 aa9.91□□□□□ -0.82
VTI1A-202ENST00000432306 PRDM10Q9NQV6 1147 aa9.91□□□□□ -0.82
VTI1A-202ENST00000432306 ROBO2Q9HCK4 1378 aa9.91□□□□□ -0.82
VTI1A-202ENST00000432306 NWD2Q9ULI1 1742 aa9.91□□□□□ -0.82
VTI1A-202ENST00000432306 ZNF500O60304 480 aaPredicted RBP9.9□□□□□ -0.82
VTI1A-202ENST00000432306 RBM26Q5T8P6 1007 aaKnown RBP9.9□□□□□ -0.82
VTI1A-202ENST00000432306 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.9□□□□□ -0.82
VTI1A-202ENST00000432306 MORC1Q86VD1 984 aa9.9□□□□□ -0.82
VTI1A-202ENST00000432306 PDLIM2Q96JY6 352 aa9.9□□□□□ -0.82
VTI1A-202ENST00000432306 CFAP53Q96M91 514 aa9.9□□□□□ -0.82
VTI1A-202ENST00000432306 MLLT3P42568 568 aaPredicted RBP9.9□□□□□ -0.83
VTI1A-202ENST00000432306 BAG6P46379 1132 aa9.9□□□□□ -0.83
VTI1A-202ENST00000432306 ALDH1L2Q3SY69 923 aa9.9□□□□□ -0.83
VTI1A-202ENST00000432306 PLPP6Q8IY26 295 aa9.9□□□□□ -0.83
VTI1A-202ENST00000432306 COL3A1P02461 1466 aaPredicted RBP9.89□□□□□ -0.83
VTI1A-202ENST00000432306 ANKRD36BQ8N2N9 1353 aa9.89□□□□□ -0.83
VTI1A-202ENST00000432306 K7ELQ4 463 aaPredicted RBP9.89□□□□□ -0.83
VTI1A-202ENST00000432306 POTEIP0CG38 1075 aa9.89□□□□□ -0.83
VTI1A-202ENST00000432306 MCM5P33992 734 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms