RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 AOX1Q06278 1338 aa12.84□□□□□ -0.35
ATP2C1-204ENST00000428331 HDGFL1Q5TGJ6 251 aa12.84□□□□□ -0.35
ATP2C1-204ENST00000428331 LARP1BQ659C4 914 aaKnown RBP12.84□□□□□ -0.35
ATP2C1-204ENST00000428331 JAKMIP1Q96N16 626 aaKnown RBP12.84□□□□□ -0.35
ATP2C1-204ENST00000428331 IFIT2P09913 472 aaKnown RBP12.84□□□□□ -0.35
ATP2C1-204ENST00000428331 FGD1P98174 961 aa12.84□□□□□ -0.35
ATP2C1-204ENST00000428331 LARP6Q9BRS8 491 aaKnown RBP12.84□□□□□ -0.35
ATP2C1-204ENST00000428331 STAP2Q9UGK3 403 aa12.84□□□□□ -0.35
ATP2C1-204ENST00000428331 CD163L1Q9NR16 1453 aa12.83□□□□□ -0.36
ATP2C1-204ENST00000428331 GOLGA6L19H0YKK7 550 aa12.83□□□□□ -0.36
ATP2C1-204ENST00000428331 EIF2S2P20042 333 aaKnown RBP12.83□□□□□ -0.36
ATP2C1-204ENST00000428331 PSMA5P28066 241 aa12.83□□□□□ -0.36
ATP2C1-204ENST00000428331 AK2P54819 239 aa12.83□□□□□ -0.36
ATP2C1-204ENST00000428331 ZRSR1Q15695 479 aaKnown RBP12.83□□□□□ -0.36
ATP2C1-204ENST00000428331 RNF20Q5VTR2 975 aa12.83□□□□□ -0.36
ATP2C1-204ENST00000428331 PNMA6EA0A0J9YXQ4 647 aa12.83□□□□□ -0.36
ATP2C1-204ENST00000428331 GLRX3O76003 335 aaKnown RBP12.83□□□□□ -0.36
ATP2C1-204ENST00000428331 GJB2P29033 226 aa12.83□□□□□ -0.36
ATP2C1-204ENST00000428331 TNMDQ9H2S6 317 aa12.83□□□□□ -0.36
ATP2C1-204ENST00000428331 HECW2Q9P2P5 1572 aa12.83□□□□□ -0.36
ATP2C1-204ENST00000428331 BICD2Q8TD16 824 aa12.82□□□□□ -0.36
ATP2C1-204ENST00000428331 RHPN1Q8TCX5 695 aa12.82□□□□□ -0.36
ATP2C1-204ENST00000428331 ARHGEF40Q8TER5 1519 aa12.82□□□□□ -0.36
ATP2C1-204ENST00000428331 C14orf37Q86TY3 774 aa12.82□□□□□ -0.36
ATP2C1-204ENST00000428331 ZHX1Q9UKY1 873 aaPredicted RBP12.82□□□□□ -0.36
ATP2C1-204ENST00000428331 SOS1Q07889 1333 aaPredicted RBP12.82□□□□□ -0.36
ATP2C1-204ENST00000428331 PPP1R42Q7Z4L9 355 aa12.82□□□□□ -0.36
ATP2C1-204ENST00000428331 NRDCO43847 1150 aa12.81□□□□□ -0.36
ATP2C1-204ENST00000428331 C17orf53Q8N3J3 647 aaPredicted RBP12.81□□□□□ -0.36
ATP2C1-204ENST00000428331 TMEM87AQ8NBN3 555 aa12.81□□□□□ -0.36
ATP2C1-204ENST00000428331 SPG7Q9UQ90 795 aa12.81□□□□□ -0.36
ATP2C1-204ENST00000428331 RAD50Q92878 1312 aa12.81□□□□□ -0.36
ATP2C1-204ENST00000428331 SGSM2O43147 1006 aa12.81□□□□□ -0.36
ATP2C1-204ENST00000428331 DNM1Q05193 864 aaKnown RBP12.81□□□□□ -0.36
ATP2C1-204ENST00000428331 PPP6R1Q9UPN7 881 aa12.81□□□□□ -0.36
ATP2C1-204ENST00000428331 NCKAP5LQ9HCH0 1330 aa12.81□□□□□ -0.36
ATP2C1-204ENST00000428331 GNAT3A8MTJ3 354 aa12.81□□□□□ -0.36
ATP2C1-204ENST00000428331 MTHFSDQ2M296 383 aaKnown RBP12.81□□□□□ -0.36
ATP2C1-204ENST00000428331 KLHL34Q8N239 644 aa12.81□□□□□ -0.36
ATP2C1-204ENST00000428331 FAM200AQ8TCP9 573 aa12.81□□□□□ -0.36
ATP2C1-204ENST00000428331 GTPBP4Q9BZE4 634 aaKnown RBP12.81□□□□□ -0.36
ATP2C1-204ENST00000428331 C9orf78Q9NZ63 289 aaPredicted RBP12.81□□□□□ -0.36
ATP2C1-204ENST00000428331 SNX14Q9Y5W7 946 aa12.81□□□□□ -0.36
ATP2C1-204ENST00000428331 CDC42BPGQ6DT37 1551 aa12.8□□□□□ -0.36
ATP2C1-204ENST00000428331 PRPF40BQ6NWY9 871 aaKnown RBP12.8□□□□□ -0.36
ATP2C1-204ENST00000428331 ZNF771Q7L3S4 317 aaPredicted RBP12.8□□□□□ -0.36
ATP2C1-204ENST00000428331 TSC1Q92574 1164 aa12.8□□□□□ -0.36
ATP2C1-204ENST00000428331 LTV1Q96GA3 475 aaPredicted RBP12.8□□□□□ -0.36
ATP2C1-204ENST00000428331 HIP1O00291 1037 aa12.8□□□□□ -0.36
ATP2C1-204ENST00000428331 FOXO3O43524 673 aa12.8□□□□□ -0.36
ATP2C1-204ENST00000428331 ANKRD1Q15327 319 aa12.8□□□□□ -0.36
ATP2C1-204ENST00000428331 SCAND2PQ9GZW5 306 aaPredicted RBP12.8□□□□□ -0.36
ATP2C1-204ENST00000428331 BECN2A8MW95 431 aa12.8□□□□□ -0.36
ATP2C1-204ENST00000428331 TPD52L1Q16890 204 aaPredicted RBP12.8□□□□□ -0.36
ATP2C1-204ENST00000428331 OSCARQ8IYS5 282 aa12.8□□□□□ -0.36
ATP2C1-204ENST00000428331 CCDC112Q8NEF3 446 aa12.8□□□□□ -0.36
ATP2C1-204ENST00000428331 ZNF592Q92610 1267 aa12.8□□□□□ -0.36
ATP2C1-204ENST00000428331 H3BQV1 296 aa12.79□□□□□ -0.36
ATP2C1-204ENST00000428331 IFFO2Q5TF58 517 aa12.79□□□□□ -0.36
ATP2C1-204ENST00000428331 FERMT3Q86UX7 667 aa12.79□□□□□ -0.36
ATP2C1-204ENST00000428331 TAF7Q15545 349 aaPredicted RBP12.79□□□□□ -0.36
ATP2C1-204ENST00000428331 UNC5CLQ8IV45 518 aa12.79□□□□□ -0.36
ATP2C1-204ENST00000428331 SPATA32Q96LK8 384 aa12.79□□□□□ -0.36
ATP2C1-204ENST00000428331 ACEP12821 1306 aa12.79□□□□□ -0.36
ATP2C1-204ENST00000428331 CAMK4Q16566 473 aa12.78□□□□□ -0.36
ATP2C1-204ENST00000428331 ERC1Q8IUD2 1116 aa12.78□□□□□ -0.36
ATP2C1-204ENST00000428331 BCL2L12Q9HB09 334 aa12.78□□□□□ -0.36
ATP2C1-204ENST00000428331 DDX19AQ9NUU7 478 aaKnown RBP12.78□□□□□ -0.36
ATP2C1-204ENST00000428331 FAM177BA6PVY3 158 aa12.78□□□□□ -0.36
ATP2C1-204ENST00000428331 VPS53Q5VIR6 699 aa12.78□□□□□ -0.36
ATP2C1-204ENST00000428331 BLOC1S2Q6QNY1 142 aa12.78□□□□□ -0.36
ATP2C1-204ENST00000428331 RIOK3O14730 519 aaKnown RBP12.77□□□□□ -0.36
ATP2C1-204ENST00000428331 HSP90B1P14625 803 aaKnown RBP12.77□□□□□ -0.36
ATP2C1-204ENST00000428331 SPDYE4A6NLX3 237 aa12.77□□□□□ -0.37
ATP2C1-204ENST00000428331 SSH3Q8TE77 659 aa12.77□□□□□ -0.37
ATP2C1-204ENST00000428331 FRMPD1Q5SYB0 1578 aa12.77□□□□□ -0.37
ATP2C1-204ENST00000428331 G3BP1Q13283 466 aaKnown RBP eCLIP12.77□□□□□ -0.37
ATP2C1-204ENST00000428331 UTP14CQ5TAP6 766 aaKnown RBP12.77□□□□□ -0.37
ATP2C1-204ENST00000428331 CCDC186Q7Z3E2 898 aa12.77□□□□□ -0.37
ATP2C1-204ENST00000428331 KIAA1524Q8TCG1 905 aa12.77□□□□□ -0.37
ATP2C1-204ENST00000428331 YEATS2Q9ULM3 1422 aa12.76□□□□□ -0.37
ATP2C1-204ENST00000428331 NEO1Q92859 1461 aa12.76□□□□□ -0.37
ATP2C1-204ENST00000428331 TNNT1P13805 278 aa12.76□□□□□ -0.37
ATP2C1-204ENST00000428331 TEFQ10587 303 aa12.76□□□□□ -0.37
ATP2C1-204ENST00000428331 CKAP2LQ8IYA6 745 aa12.76□□□□□ -0.37
ATP2C1-204ENST00000428331 ECHDC1Q9NTX5 307 aa12.76□□□□□ -0.37
ATP2C1-204ENST00000428331 SPTLC3Q9NUV7 552 aa12.76□□□□□ -0.37
ATP2C1-204ENST00000428331 ALKQ9UM73 1620 aa12.76□□□□□ -0.37
ATP2C1-204ENST00000428331 C16orf45Q96MC5 204 aaPredicted RBP12.76□□□□□ -0.37
ATP2C1-204ENST00000428331 NLRP6P59044 892 aa12.76□□□□□ -0.37
ATP2C1-204ENST00000428331 TYRO3Q06418 890 aa12.76□□□□□ -0.37
ATP2C1-204ENST00000428331 RUFY3Q7L099 469 aa12.76□□□□□ -0.37
ATP2C1-204ENST00000428331 USP44Q9H0E7 712 aa12.76□□□□□ -0.37
ATP2C1-204ENST00000428331 ANKRD26Q9UPS8 1709 aa12.76□□□□□ -0.37
ATP2C1-204ENST00000428331 GTF2F1P35269 517 aaKnown RBP eCLIP12.76□□□□□ -0.37
ATP2C1-204ENST00000428331 DMTNQ08495 405 aa12.76□□□□□ -0.37
ATP2C1-204ENST00000428331 PTGS1P23219 599 aa12.75□□□□□ -0.37
ATP2C1-204ENST00000428331 FEZ1Q99689 392 aa12.75□□□□□ -0.37
ATP2C1-204ENST00000428331 MAP3K19Q56UN5 1328 aa12.75□□□□□ -0.37
ATP2C1-204ENST00000428331 TTC41PQ6P2S7 1318 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 502.8 ms