RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 CHMLP26374 656 aa16.23■□□□□ 0.19
LRCH3-203ENST00000425562 MAPK8IP2Q13387 824 aaPredicted RBP16.22■□□□□ 0.19
LRCH3-203ENST00000425562 USHBP1Q8N6Y0 703 aa16.22■□□□□ 0.19
LRCH3-203ENST00000425562 SPG7Q9UQ90 795 aa16.22■□□□□ 0.19
LRCH3-203ENST00000425562 SPATA31D1Q6ZQQ2 1576 aa16.22■□□□□ 0.19
LRCH3-203ENST00000425562 VPS37CA5D8V6 355 aaPredicted RBP16.22■□□□□ 0.19
LRCH3-203ENST00000425562 PHF14O94880 888 aa16.22■□□□□ 0.19
LRCH3-203ENST00000425562 HMMRO75330 724 aa16.21■□□□□ 0.19
LRCH3-203ENST00000425562 DNM1Q05193 864 aaKnown RBP16.21■□□□□ 0.19
LRCH3-203ENST00000425562 C16orf45Q96MC5 204 aaPredicted RBP16.21■□□□□ 0.19
LRCH3-203ENST00000425562 KCNF1Q9H3M0 494 aa16.21■□□□□ 0.19
LRCH3-203ENST00000425562 FKBP5Q13451 457 aaPredicted RBP16.21■□□□□ 0.19
LRCH3-203ENST00000425562 LRMPQ12912 555 aa16.2■□□□□ 0.18
LRCH3-203ENST00000425562 CCDC183Q5T5S1 534 aa16.2■□□□□ 0.18
LRCH3-203ENST00000425562 EYA1Q99502 592 aa16.2■□□□□ 0.18
LRCH3-203ENST00000425562 PTGS1P23219 599 aa16.2■□□□□ 0.18
LRCH3-203ENST00000425562 CUL4AQ13619 759 aa16.2■□□□□ 0.18
LRCH3-203ENST00000425562 DRC7Q8IY82 874 aa16.2■□□□□ 0.18
LRCH3-203ENST00000425562 ZNF592Q92610 1267 aa16.2■□□□□ 0.18
LRCH3-203ENST00000425562 LRRCC1Q9C099 1032 aa16.2■□□□□ 0.18
LRCH3-203ENST00000425562 WDR33Q9C0J8 1336 aaKnown RBP16.2■□□□□ 0.18
LRCH3-203ENST00000425562 DIP2BQ9P265 1576 aa16.2■□□□□ 0.18
LRCH3-203ENST00000425562 TNRQ92752 1358 aa16.2■□□□□ 0.18
LRCH3-203ENST00000425562 LARGE1O95461 756 aa16.2■□□□□ 0.18
LRCH3-203ENST00000425562 SYT1P21579 422 aa16.2■□□□□ 0.18
LRCH3-203ENST00000425562 HDGFP51858 240 aaKnown RBP16.2■□□□□ 0.18
LRCH3-203ENST00000425562 CCDC83Q8IWF9 413 aa16.2■□□□□ 0.18
LRCH3-203ENST00000425562 CKAP2LQ8IYA6 745 aa16.2■□□□□ 0.18
LRCH3-203ENST00000425562 KDM4AO75164 1064 aa16.19■□□□□ 0.18
LRCH3-203ENST00000425562 RASEFQ8IZ41 740 aa16.19■□□□□ 0.18
LRCH3-203ENST00000425562 HMGN5P82970 282 aaKnown RBP16.19■□□□□ 0.18
LRCH3-203ENST00000425562 AMOTL2Q9Y2J4 779 aa16.19■□□□□ 0.18
LRCH3-203ENST00000425562 ITSN1Q15811 1721 aa16.19■□□□□ 0.18
LRCH3-203ENST00000425562 MON2Q7Z3U7 1717 aa16.18■□□□□ 0.18
LRCH3-203ENST00000425562 ZBTB22O15209 634 aa16.18■□□□□ 0.18
LRCH3-203ENST00000425562 CWC27Q6UX04 472 aaKnown RBP16.18■□□□□ 0.18
LRCH3-203ENST00000425562 PRIMPOLQ96LW4 560 aa16.18■□□□□ 0.18
LRCH3-203ENST00000425562 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.18■□□□□ 0.18
LRCH3-203ENST00000425562 V9GYY5 206 aaPredicted RBP16.18■□□□□ 0.18
LRCH3-203ENST00000425562 C3P01024 1663 aa16.18■□□□□ 0.18
LRCH3-203ENST00000425562 AK2P54819 239 aa16.18■□□□□ 0.18
LRCH3-203ENST00000425562 NLRP6P59044 892 aa16.18■□□□□ 0.18
LRCH3-203ENST00000425562 NECAB1Q8N987 351 aa16.18■□□□□ 0.18
LRCH3-203ENST00000425562 NRBP1Q9UHY1 535 aa16.18■□□□□ 0.18
LRCH3-203ENST00000425562 PPP6R1Q9UPN7 881 aa16.18■□□□□ 0.18
LRCH3-203ENST00000425562 LRRFIP2Q9Y608 721 aaKnown RBP16.18■□□□□ 0.18
LRCH3-203ENST00000425562 TMEM2Q9UHN6 1383 aa16.18■□□□□ 0.18
LRCH3-203ENST00000425562 LUZP1Q86V48 1076 aa16.17■□□□□ 0.18
LRCH3-203ENST00000425562 TCEANC2Q96MN5 208 aa16.17■□□□□ 0.18
LRCH3-203ENST00000425562 PEAK1Q9H792 1746 aa16.17■□□□□ 0.18
LRCH3-203ENST00000425562 CHAF1AQ13111 956 aaPredicted RBP16.17■□□□□ 0.18
LRCH3-203ENST00000425562 SMC3Q9UQE7 1217 aa16.17■□□□□ 0.18
LRCH3-203ENST00000425562 CRB1P82279 1406 aa16.17■□□□□ 0.18
LRCH3-203ENST00000425562 SETD1BQ9UPS6 1966 aaKnown RBP16.17■□□□□ 0.18
LRCH3-203ENST00000425562 NPHP1O15259 732 aa16.17■□□□□ 0.18
LRCH3-203ENST00000425562 STX6O43752 255 aa16.17■□□□□ 0.18
LRCH3-203ENST00000425562 GNAI2P04899 355 aa16.17■□□□□ 0.18
LRCH3-203ENST00000425562 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.16■□□□□ 0.18
LRCH3-203ENST00000425562 USP6P35125 1406 aa16.16■□□□□ 0.18
LRCH3-203ENST00000425562 PTPRCP08575 1304 aa16.16■□□□□ 0.18
LRCH3-203ENST00000425562 ZSCAN22P10073 491 aaPredicted RBP16.16■□□□□ 0.18
LRCH3-203ENST00000425562 STK31Q9BXU1 1019 aa16.16■□□□□ 0.18
LRCH3-203ENST00000425562 ZNF771Q7L3S4 317 aaPredicted RBP16.16■□□□□ 0.18
LRCH3-203ENST00000425562 RPAP1Q9BWH6 1393 aaPredicted RBP16.15■□□□□ 0.18
LRCH3-203ENST00000425562 MCM2P49736 904 aa16.15■□□□□ 0.18
LRCH3-203ENST00000425562 EIF2S2P20042 333 aaKnown RBP16.15■□□□□ 0.18
LRCH3-203ENST00000425562 CASTP20810 708 aaKnown RBP16.15■□□□□ 0.18
LRCH3-203ENST00000425562 CGNQ9P2M7 1197 aaKnown RBP16.15■□□□□ 0.18
LRCH3-203ENST00000425562 OVOS2A0A0J9YW53 1432 aa16.15■□□□□ 0.18
LRCH3-203ENST00000425562 OVOS2Q6IE36 1432 aa16.15■□□□□ 0.18
LRCH3-203ENST00000425562 ADAMTS13Q76LX8 1427 aa16.15■□□□□ 0.18
LRCH3-203ENST00000425562 AKAP12Q02952 1782 aa16.15■□□□□ 0.18
LRCH3-203ENST00000425562 FLIIQ13045 1269 aa16.14■□□□□ 0.17
LRCH3-203ENST00000425562 COL9A3Q14050 684 aaPredicted RBP16.14■□□□□ 0.17
LRCH3-203ENST00000425562 RUFY3Q7L099 469 aa16.14■□□□□ 0.17
LRCH3-203ENST00000425562 KIAA1524Q8TCG1 905 aa16.14■□□□□ 0.17
LRCH3-203ENST00000425562 CCDC186Q7Z3E2 898 aa16.14■□□□□ 0.17
LRCH3-203ENST00000425562 FAM184AQ8NB25 1140 aa16.14■□□□□ 0.17
LRCH3-203ENST00000425562 TFIP11Q9UBB9 837 aaKnown RBP16.14■□□□□ 0.17
LRCH3-203ENST00000425562 PLEKHG3A1L390 1219 aa16.14■□□□□ 0.17
LRCH3-203ENST00000425562 ANXA1P04083 346 aa16.14■□□□□ 0.17
LRCH3-203ENST00000425562 FBXW7Q969H0 707 aa16.14■□□□□ 0.17
LRCH3-203ENST00000425562 INTS4Q96HW7 963 aaKnown RBP16.14■□□□□ 0.17
LRCH3-203ENST00000425562 PTPRUQ92729 1446 aa16.13■□□□□ 0.17
LRCH3-203ENST00000425562 SURF6O75683 361 aaKnown RBP16.13■□□□□ 0.17
LRCH3-203ENST00000425562 GJB2P29033 226 aa16.13■□□□□ 0.17
LRCH3-203ENST00000425562 UBE2HP62256 183 aa16.13■□□□□ 0.17
LRCH3-203ENST00000425562 PHAXQ9H814 394 aaKnown RBP16.13■□□□□ 0.17
LRCH3-203ENST00000425562 AGLP35573 1532 aa16.13■□□□□ 0.17
LRCH3-203ENST00000425562 F13A1P00488 732 aa16.13■□□□□ 0.17
LRCH3-203ENST00000425562 HAP1P54257 671 aaPredicted RBP16.13■□□□□ 0.17
LRCH3-203ENST00000425562 SNX14Q9Y5W7 946 aa16.13■□□□□ 0.17
LRCH3-203ENST00000425562 KIAA0232Q92628 1395 aa16.13■□□□□ 0.17
LRCH3-203ENST00000425562 CEP170BQ9Y4F5 1589 aaPredicted RBP16.13■□□□□ 0.17
LRCH3-203ENST00000425562 A0A087WWV3 80 aa16.12■□□□□ 0.17
LRCH3-203ENST00000425562 ADCK5Q3MIX3 580 aa16.11■□□□□ 0.17
LRCH3-203ENST00000425562 PPFIA3O75145 1194 aa16.11■□□□□ 0.17
LRCH3-203ENST00000425562 LIG1P18858 919 aa16.11■□□□□ 0.17
LRCH3-203ENST00000425562 CCT4P50991 539 aaKnown RBP16.11■□□□□ 0.17
LRCH3-203ENST00000425562 KIF24Q5T7B8 1368 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms