RNA–Protein interactions for RNA: ENST00000415891.5

CLIP4-205, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-205ENST00000415891 MPP4Q96JB8 637 aa8□□□□□ -1.13
CLIP4-205ENST00000415891 CASS4Q9NQ75 786 aa8□□□□□ -1.13
CLIP4-205ENST00000415891 MKS1Q9NXB0 559 aa8□□□□□ -1.13
CLIP4-205ENST00000415891 CALCOCO1Q9P1Z2 691 aa8□□□□□ -1.13
CLIP4-205ENST00000415891 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8□□□□□ -1.13
CLIP4-205ENST00000415891 TMCO5BA8MYB1 307 aa7.99□□□□□ -1.13
CLIP4-205ENST00000415891 DYNC1I1O14576 645 aa7.99□□□□□ -1.13
CLIP4-205ENST00000415891 TRIM66O15016 1216 aa7.99□□□□□ -1.13
CLIP4-205ENST00000415891 SLC7A5Q01650 507 aa7.99□□□□□ -1.13
CLIP4-205ENST00000415891 FRS2Q8WU20 508 aa7.99□□□□□ -1.13
CLIP4-205ENST00000415891 GIMAP1Q8WWP7 306 aa7.99□□□□□ -1.13
CLIP4-205ENST00000415891 CENPTQ96BT3 561 aa7.99□□□□□ -1.13
CLIP4-205ENST00000415891 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.99□□□□□ -1.13
CLIP4-205ENST00000415891 ETAA1Q9NY74 926 aa7.99□□□□□ -1.13
CLIP4-205ENST00000415891 BLOC1S6Q9UL45 172 aa7.99□□□□□ -1.13
CLIP4-205ENST00000415891 ATF5Q9Y2D1 282 aaPredicted RBP7.99□□□□□ -1.13
CLIP4-205ENST00000415891 PRC1O43663 620 aa7.99□□□□□ -1.13
CLIP4-205ENST00000415891 WAPLQ7Z5K2 1190 aa7.99□□□□□ -1.13
CLIP4-205ENST00000415891 MIGA1Q8NAN2 632 aa7.99□□□□□ -1.13
CLIP4-205ENST00000415891 DHX38Q92620 1227 aaKnown RBP7.99□□□□□ -1.13
CLIP4-205ENST00000415891 VMP1Q96GC9 406 aa7.99□□□□□ -1.13
CLIP4-205ENST00000415891 COMMD8Q9NX08 183 aa7.99□□□□□ -1.13
CLIP4-205ENST00000415891 MAFFQ9ULX9 164 aa7.99□□□□□ -1.13
CLIP4-205ENST00000415891 GJA3Q9Y6H8 435 aa7.99□□□□□ -1.13
CLIP4-205ENST00000415891 TMEM110-MUSTN1A8MSY1 372 aa7.98□□□□□ -1.13
CLIP4-205ENST00000415891 CCDC159P0C7I6 412 aa7.98□□□□□ -1.13
CLIP4-205ENST00000415891 RBP3P10745 1247 aa7.98□□□□□ -1.13
CLIP4-205ENST00000415891 VCAM1P19320 739 aa7.98□□□□□ -1.13
CLIP4-205ENST00000415891 FAM160A1Q05DH4 1040 aa7.98□□□□□ -1.13
CLIP4-205ENST00000415891 CCDC144BQ3MJ40 725 aa7.98□□□□□ -1.13
CLIP4-205ENST00000415891 CCDC93Q567U6 631 aa7.98□□□□□ -1.13
CLIP4-205ENST00000415891 RUNDC1Q96C34 613 aa7.98□□□□□ -1.13
CLIP4-205ENST00000415891 PIF1Q9H611 641 aa7.98□□□□□ -1.13
CLIP4-205ENST00000415891 COL4A3BPQ9Y5P4 624 aa7.98□□□□□ -1.13
CLIP4-205ENST00000415891 LDHAP00338 332 aaKnown RBP7.98□□□□□ -1.13
CLIP4-205ENST00000415891 COL6A1P12109 1028 aa7.98□□□□□ -1.13
CLIP4-205ENST00000415891 ENPP1P22413 925 aa7.98□□□□□ -1.13
CLIP4-205ENST00000415891 HOXD10P28358 340 aa7.98□□□□□ -1.13
CLIP4-205ENST00000415891 GSCP56915 257 aaPredicted RBP7.98□□□□□ -1.13
CLIP4-205ENST00000415891 UBE4AQ14139 1066 aa7.98□□□□□ -1.13
CLIP4-205ENST00000415891 CDHR1Q96JP9 859 aa7.98□□□□□ -1.13
CLIP4-205ENST00000415891 VEZTQ9HBM0 779 aa7.98□□□□□ -1.13
CLIP4-205ENST00000415891 ATP1B4Q9UN42 357 aaPredicted RBP7.98□□□□□ -1.13
CLIP4-205ENST00000415891 N6AMT1Q9Y5N5 214 aa7.98□□□□□ -1.13
CLIP4-205ENST00000415891 ZNF131P52739 623 aa7.97□□□□□ -1.13
CLIP4-205ENST00000415891 TMED1Q13445 227 aa7.97□□□□□ -1.13
CLIP4-205ENST00000415891 SEPT2Q15019 361 aa7.97□□□□□ -1.13
CLIP4-205ENST00000415891 GIPC2Q8TF65 315 aa7.97□□□□□ -1.13
CLIP4-205ENST00000415891 CEP89Q96ST8 783 aa7.97□□□□□ -1.13
CLIP4-205ENST00000415891 BCL2L13Q9BXK5 485 aa7.97□□□□□ -1.13
CLIP4-205ENST00000415891 PDGFDQ9GZP0 370 aaPredicted RBP7.97□□□□□ -1.13
CLIP4-205ENST00000415891 TRMT1Q9NXH9 659 aaKnown RBP7.97□□□□□ -1.13
CLIP4-205ENST00000415891 BBOX1O75936 387 aa7.96□□□□□ -1.13
CLIP4-205ENST00000415891 RPL17P18621 184 aaKnown RBP7.96□□□□□ -1.13
CLIP4-205ENST00000415891 SIM2Q14190 667 aaPredicted RBP7.96□□□□□ -1.13
CLIP4-205ENST00000415891 ARMC3Q5W041 872 aa7.96□□□□□ -1.13
CLIP4-205ENST00000415891 NFXL1Q6ZNB6 911 aa7.96□□□□□ -1.13
CLIP4-205ENST00000415891 TATDN2Q93075 761 aa7.96□□□□□ -1.13
CLIP4-205ENST00000415891 SYAP1Q96A49 352 aaPredicted RBP7.96□□□□□ -1.13
CLIP4-205ENST00000415891 SLC39A13Q96H72 371 aa7.96□□□□□ -1.13
CLIP4-205ENST00000415891 DHX36Q9H2U1 1008 aaKnown RBP7.96□□□□□ -1.13
CLIP4-205ENST00000415891 USTQ9Y2C2 406 aa7.96□□□□□ -1.13
CLIP4-205ENST00000415891 IKBKGQ9Y6K9 419 aa7.96□□□□□ -1.13
CLIP4-205ENST00000415891 SPDYE4A6NLX3 237 aa7.96□□□□□ -1.14
CLIP4-205ENST00000415891 IL4RP24394 825 aa7.96□□□□□ -1.14
CLIP4-205ENST00000415891 TRAF1Q13077 416 aa7.96□□□□□ -1.14
CLIP4-205ENST00000415891 SAFB2Q14151 953 aaKnown RBP eCLIP7.96□□□□□ -1.14
CLIP4-205ENST00000415891 INF2Q27J81 1249 aa7.96□□□□□ -1.14
CLIP4-205ENST00000415891 FILIP1LQ4L180 1135 aa7.96□□□□□ -1.14
CLIP4-205ENST00000415891 ZCCHC8Q6NZY4 707 aaKnown RBP7.96□□□□□ -1.14
CLIP4-205ENST00000415891 CCDC91Q7Z6B0 441 aa7.96□□□□□ -1.14
CLIP4-205ENST00000415891 SAMD14Q8IZD0 417 aaPredicted RBP7.96□□□□□ -1.14
CLIP4-205ENST00000415891 NACADO15069 1562 aa7.95□□□□□ -1.14
CLIP4-205ENST00000415891 FSD2A1L4K1 749 aa7.95□□□□□ -1.14
CLIP4-205ENST00000415891 VAMP4O75379 141 aa7.95□□□□□ -1.14
CLIP4-205ENST00000415891 S100BP04271 92 aaPredicted RBP7.95□□□□□ -1.14
CLIP4-205ENST00000415891 HSP90AB1P08238 724 aaKnown RBP7.95□□□□□ -1.14
CLIP4-205ENST00000415891 HOXA10P31260 410 aaPredicted RBP7.95□□□□□ -1.14
CLIP4-205ENST00000415891 PIK3CAP42336 1068 aa7.95□□□□□ -1.14
CLIP4-205ENST00000415891 RBM6P78332 1123 aaKnown RBP7.95□□□□□ -1.14
CLIP4-205ENST00000415891 DDB1Q16531 1140 aa7.95□□□□□ -1.14
CLIP4-205ENST00000415891 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.95□□□□□ -1.14
CLIP4-205ENST00000415891 NCAPG2Q86XI2 1143 aa7.95□□□□□ -1.14
CLIP4-205ENST00000415891 IWS1Q96ST2 819 aa7.95□□□□□ -1.14
CLIP4-205ENST00000415891 MPHOSPH6Q99547 160 aaKnown RBP7.95□□□□□ -1.14
CLIP4-205ENST00000415891 PCDH12Q9NPG4 1184 aa7.95□□□□□ -1.14
CLIP4-205ENST00000415891 OFD1O75665 1012 aa7.95□□□□□ -1.14
CLIP4-205ENST00000415891 HSPA5P11021 654 aaKnown RBP7.95□□□□□ -1.14
CLIP4-205ENST00000415891 SESN3P58005 492 aa7.95□□□□□ -1.14
CLIP4-205ENST00000415891 IRX1P78414 480 aaPredicted RBP7.95□□□□□ -1.14
CLIP4-205ENST00000415891 CHAF1AQ13111 956 aaPredicted RBP7.95□□□□□ -1.14
CLIP4-205ENST00000415891 NFE2L2Q16236 605 aa7.95□□□□□ -1.14
CLIP4-205ENST00000415891 ANKRD45Q5TZF3 282 aa7.95□□□□□ -1.14
CLIP4-205ENST00000415891 MYSM1Q5VVJ2 828 aa7.95□□□□□ -1.14
CLIP4-205ENST00000415891 ZNF771Q7L3S4 317 aaPredicted RBP7.95□□□□□ -1.14
CLIP4-205ENST00000415891 NPAS4Q8IUM7 802 aa7.95□□□□□ -1.14
CLIP4-205ENST00000415891 SUGP1Q8IWZ8 645 aaKnown RBP7.95□□□□□ -1.14
CLIP4-205ENST00000415891 MYOCDQ8IZQ8 938 aa7.95□□□□□ -1.14
CLIP4-205ENST00000415891 TMC2Q8TDI7 906 aa7.95□□□□□ -1.14
CLIP4-205ENST00000415891 ATRIPQ8WXE1 791 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms