RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 ITPK1Q13572 414 aa10.34□□□□□ -0.75
UBE2F-204ENST00000409953 ERICH6Q7L0X2 663 aa10.34□□□□□ -0.75
UBE2F-204ENST00000409953 MPNDQ8N594 471 aa10.34□□□□□ -0.75
UBE2F-204ENST00000409953 L3MBTL3Q96JM7 780 aaPredicted RBP10.34□□□□□ -0.75
UBE2F-204ENST00000409953 RTCBQ9Y3I0 505 aaKnown RBP10.34□□□□□ -0.75
UBE2F-204ENST00000409953 MAP2P11137 1827 aaKnown RBP10.34□□□□□ -0.75
UBE2F-204ENST00000409953 SCN4AP35499 1836 aa10.34□□□□□ -0.75
UBE2F-204ENST00000409953 FAM208AQ9UK61 1670 aaKnown RBP10.34□□□□□ -0.75
UBE2F-204ENST00000409953 IFNLR1Q8IU57 520 aaPredicted RBP10.33□□□□□ -0.76
UBE2F-204ENST00000409953 LTV1Q96GA3 475 aaPredicted RBP10.33□□□□□ -0.76
UBE2F-204ENST00000409953 DICER1Q9UPY3 1922 aaKnown RBP10.33□□□□□ -0.76
UBE2F-204ENST00000409953 TTC21AQ8NDW8 1320 aa10.33□□□□□ -0.76
UBE2F-204ENST00000409953 TRIOBPQ9H2D6 2365 aa10.32□□□□□ -0.76
UBE2F-204ENST00000409953 DDR1Q08345 913 aa10.32□□□□□ -0.76
UBE2F-204ENST00000409953 CIAPIN1Q6FI81 312 aa10.32□□□□□ -0.76
UBE2F-204ENST00000409953 ARHGEF1Q92888 912 aaKnown RBP10.32□□□□□ -0.76
UBE2F-204ENST00000409953 HPS5Q9UPZ3 1129 aa10.32□□□□□ -0.76
UBE2F-204ENST00000409953 RFC4P35249 363 aa10.31□□□□□ -0.76
UBE2F-204ENST00000409953 ATP6V1AP38606 617 aa10.31□□□□□ -0.76
UBE2F-204ENST00000409953 FMR1Q06787 632 aaKnown RBP eCLIP10.31□□□□□ -0.763e-6■■■■□ 23.7
UBE2F-204ENST00000409953 TTLL6Q8N841 843 aa10.31□□□□□ -0.76
UBE2F-204ENST00000409953 HACL1Q9UJ83 578 aa10.31□□□□□ -0.76
UBE2F-204ENST00000409953 COLQQ9Y215 455 aaPredicted RBP10.31□□□□□ -0.76
UBE2F-204ENST00000409953 TLL2Q9Y6L7 1015 aa10.31□□□□□ -0.76
UBE2F-204ENST00000409953 EPHX2P34913 555 aa10.3□□□□□ -0.76
UBE2F-204ENST00000409953 DLEC1Q9Y238 1755 aa10.29□□□□□ -0.76
UBE2F-204ENST00000409953 CTU1Q7Z7A3 348 aaKnown RBP10.29□□□□□ -0.76
UBE2F-204ENST00000409953 PNMA8AQ86V59 439 aaPredicted RBP10.29□□□□□ -0.76
UBE2F-204ENST00000409953 PIGBQ92521 554 aa10.29□□□□□ -0.76
UBE2F-204ENST00000409953 COL6A3P12111 3177 aa10.28□□□□□ -0.76
UBE2F-204ENST00000409953 ITGB4P16144 1822 aa10.28□□□□□ -0.76
UBE2F-204ENST00000409953 PITPNM1O00562 1244 aa10.28□□□□□ -0.76
UBE2F-204ENST00000409953 KDM2AQ9Y2K7 1162 aa10.28□□□□□ -0.76
UBE2F-204ENST00000409953 PCDH11XQ9BZA7 1347 aa10.28□□□□□ -0.76
UBE2F-204ENST00000409953 PCDH11YQ9BZA8 1340 aa10.28□□□□□ -0.76
UBE2F-204ENST00000409953 MKI67P46013 3256 aaKnown RBP10.27□□□□□ -0.76
UBE2F-204ENST00000409953 CST9Q5W186 159 aa10.27□□□□□ -0.77
UBE2F-204ENST00000409953 MIER1Q8N108 512 aa10.27□□□□□ -0.77
UBE2F-204ENST00000409953 SMG6Q86US8 1419 aaKnown RBP10.26□□□□□ -0.77
UBE2F-204ENST00000409953 POLRMTO00411 1230 aaKnown RBP10.26□□□□□ -0.77
UBE2F-204ENST00000409953 PRR29P0C7W0 189 aa10.26□□□□□ -0.77
UBE2F-204ENST00000409953 TAOK3Q9H2K8 898 aa10.26□□□□□ -0.77
UBE2F-204ENST00000409953 SRP68Q9UHB9 627 aaKnown RBP10.26□□□□□ -0.77
UBE2F-204ENST00000409953 LTBP3Q9NS15 1303 aa10.26□□□□□ -0.77
UBE2F-204ENST00000409953 USP31Q70CQ4 1352 aa10.26□□□□□ -0.77
UBE2F-204ENST00000409953 FER1L6Q2WGJ9 1857 aa10.25□□□□□ -0.77
UBE2F-204ENST00000409953 CD163L1Q9NR16 1453 aa10.25□□□□□ -0.77
UBE2F-204ENST00000409953 C21orf2O43822 256 aa10.25□□□□□ -0.77
UBE2F-204ENST00000409953 SAPCD2Q86UD0 394 aa10.25□□□□□ -0.77
UBE2F-204ENST00000409953 PLCD3Q8N3E9 789 aa10.25□□□□□ -0.77
UBE2F-204ENST00000409953 IP6K1Q92551 441 aa10.25□□□□□ -0.77
UBE2F-204ENST00000409953 CGNL1Q0VF96 1302 aa10.25□□□□□ -0.77
UBE2F-204ENST00000409953 RNF123Q5XPI4 1314 aa10.25□□□□□ -0.77
UBE2F-204ENST00000409953 ZNF541Q9H0D2 1346 aa10.25□□□□□ -0.77
UBE2F-204ENST00000409953 RGPD2P0DJD1 1756 aa10.24□□□□□ -0.77
UBE2F-204ENST00000409953 TRPM7Q96QT4 1865 aa10.24□□□□□ -0.77
UBE2F-204ENST00000409953 TRAF5O00463 557 aa10.24□□□□□ -0.77
UBE2F-204ENST00000409953 C2CD5Q86YS7 1000 aa10.24□□□□□ -0.77
UBE2F-204ENST00000409953 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.24□□□□□ -0.77
UBE2F-204ENST00000409953 ZIC5Q96T25 663 aa10.24□□□□□ -0.77
UBE2F-204ENST00000409953 MPHOSPH9Q99550 1183 aa10.24□□□□□ -0.77
UBE2F-204ENST00000409953 SAGE1Q9NXZ1 904 aa10.24□□□□□ -0.77
UBE2F-204ENST00000409953 ASAP1Q9ULH1 1129 aa10.24□□□□□ -0.77
UBE2F-204ENST00000409953 RPS6KA4O75676 772 aa10.23□□□□□ -0.77
UBE2F-204ENST00000409953 NOGQ13253 232 aa10.23□□□□□ -0.77
UBE2F-204ENST00000409953 AKAP4Q5JQC9 854 aa10.23□□□□□ -0.77
UBE2F-204ENST00000409953 RAPGEF4Q8WZA2 1011 aa10.23□□□□□ -0.77
UBE2F-204ENST00000409953 COL25A1Q9BXS0 654 aaPredicted RBP10.23□□□□□ -0.77
UBE2F-204ENST00000409953 USP42Q9H9J4 1324 aaKnown RBP10.23□□□□□ -0.77
UBE2F-204ENST00000409953 KTN1Q86UP2 1357 aaKnown RBP10.23□□□□□ -0.77
UBE2F-204ENST00000409953 CYP27B1O15528 508 aa10.22□□□□□ -0.77
UBE2F-204ENST00000409953 PRKCSHP14314 528 aaPredicted RBP10.22□□□□□ -0.77
UBE2F-204ENST00000409953 RC3H1Q5TC82 1133 aaKnown RBP10.22□□□□□ -0.77
UBE2F-204ENST00000409953 NME9Q86XW9 330 aa10.22□□□□□ -0.77
UBE2F-204ENST00000409953 USHBP1Q8N6Y0 703 aa10.22□□□□□ -0.77
UBE2F-204ENST00000409953 DCAF11Q8TEB1 546 aa10.22□□□□□ -0.77
UBE2F-204ENST00000409953 HHIPL1Q96JK4 782 aa10.22□□□□□ -0.77
UBE2F-204ENST00000409953 ZBTB47Q9UFB7 747 aaPredicted RBP10.22□□□□□ -0.77
UBE2F-204ENST00000409953 CNTNAP4Q9C0A0 1308 aa10.22□□□□□ -0.77
UBE2F-204ENST00000409953 KDRP35968 1356 aa10.22□□□□□ -0.77
UBE2F-204ENST00000409953 LOC105371045A0A1W2PR82 267 aa10.21□□□□□ -0.77
UBE2F-204ENST00000409953 H0YIN7 160 aa10.21□□□□□ -0.77
UBE2F-204ENST00000409953 TATP17735 454 aaPredicted RBP10.21□□□□□ -0.77
UBE2F-204ENST00000409953 TM4SF1P30408 202 aa10.21□□□□□ -0.77
UBE2F-204ENST00000409953 PKN2Q16513 984 aaKnown RBP10.21□□□□□ -0.77
UBE2F-204ENST00000409953 CENPJQ9HC77 1338 aaPredicted RBP10.21□□□□□ -0.78
UBE2F-204ENST00000409953 INSRP06213 1382 aa10.21□□□□□ -0.78
UBE2F-204ENST00000409953 CEP290O15078 2479 aa10.2□□□□□ -0.78
UBE2F-204ENST00000409953 TRPA1O75762 1119 aa10.2□□□□□ -0.78
UBE2F-204ENST00000409953 CELF2O95319 508 aaKnown RBP10.2□□□□□ -0.78
UBE2F-204ENST00000409953 MAP3K19Q56UN5 1328 aa10.2□□□□□ -0.78
UBE2F-204ENST00000409953 BICDL1Q6ZP65 573 aa10.2□□□□□ -0.78
UBE2F-204ENST00000409953 TMOD3Q9NYL9 352 aa10.2□□□□□ -0.78
UBE2F-204ENST00000409953 COL5A3P25940 1745 aaPredicted RBP10.19□□□□□ -0.78
UBE2F-204ENST00000409953 CARMIL3Q8ND23 1372 aa10.19□□□□□ -0.78
UBE2F-204ENST00000409953 ZNF622Q969S3 477 aaKnown RBP eCLIP10.19□□□□□ -0.78
UBE2F-204ENST00000409953 AFDNP55196 1824 aaKnown RBP10.19□□□□□ -0.78
UBE2F-204ENST00000409953 NBPF6Q5VWK0 638 aa10.18□□□□□ -0.78
UBE2F-204ENST00000409953 NBPF4Q96M43 638 aa10.18□□□□□ -0.78
UBE2F-204ENST00000409953 SLC4A9Q96Q91 983 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms