RNA–Protein interactions for RNA: ENST00000409190.7

SYNC-202, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SYNC, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-202ENST00000409190 FERMT3Q86UX7 667 aa20.31■□□□□ 0.84
SYNC-202ENST00000409190 SYAP1Q96A49 352 aaPredicted RBP20.31■□□□□ 0.84
SYNC-202ENST00000409190 PA2G4Q9UQ80 394 aaKnown RBP20.31■□□□□ 0.84
SYNC-202ENST00000409190 SALL3Q9BXA9 1300 aa20.31■□□□□ 0.84
SYNC-202ENST00000409190 LARGE1O95461 756 aa20.31■□□□□ 0.84
SYNC-202ENST00000409190 KCNJ4P48050 445 aa20.31■□□□□ 0.84
SYNC-202ENST00000409190 CUL4AQ13619 759 aa20.31■□□□□ 0.84
SYNC-202ENST00000409190 CHPF2Q9P2E5 772 aa20.31■□□□□ 0.84
SYNC-202ENST00000409190 GIMAP6Q6P9H5 292 aa20.31■□□□□ 0.84
SYNC-202ENST00000409190 LGR6Q9HBX8 967 aa20.31■□□□□ 0.84
SYNC-202ENST00000409190 NECAB1Q8N987 351 aa20.3■□□□□ 0.84
SYNC-202ENST00000409190 SMC3Q9UQE7 1217 aa20.3■□□□□ 0.84
SYNC-202ENST00000409190 WDR33Q9C0J8 1336 aaKnown RBP20.3■□□□□ 0.84
SYNC-202ENST00000409190 SNX14Q9Y5W7 946 aa20.3■□□□□ 0.84
SYNC-202ENST00000409190 USP6P35125 1406 aa20.3■□□□□ 0.84
SYNC-202ENST00000409190 FAM173BQ6P4H8 233 aa20.29■□□□□ 0.84
SYNC-202ENST00000409190 PRPF40BQ6NWY9 871 aaKnown RBP20.29■□□□□ 0.84
SYNC-202ENST00000409190 LMOD2Q6P5Q4 547 aa20.29■□□□□ 0.84
SYNC-202ENST00000409190 BCL11BQ9C0K0 894 aaPredicted RBP20.29■□□□□ 0.84
SYNC-202ENST00000409190 DIAPH3Q9NSV4 1193 aa20.29■□□□□ 0.84
SYNC-202ENST00000409190 PLEKHG3A1L390 1219 aa20.28■□□□□ 0.84
SYNC-202ENST00000409190 FLT4P35916 1363 aa20.28■□□□□ 0.84
SYNC-202ENST00000409190 SYT1P21579 422 aa20.28■□□□□ 0.84
SYNC-202ENST00000409190 SPC24Q8NBT2 197 aa20.28■□□□□ 0.84
SYNC-202ENST00000409190 JAKMIP1Q96N16 626 aaKnown RBP20.28■□□□□ 0.84
SYNC-202ENST00000409190 PKNOX2Q96KN3 472 aa20.28■□□□□ 0.84
SYNC-202ENST00000409190 HSPA4P34932 840 aa20.27■□□□□ 0.84
SYNC-202ENST00000409190 CCDC9Q9Y3X0 531 aaKnown RBP20.27■□□□□ 0.84
SYNC-202ENST00000409190 DNM1Q05193 864 aaKnown RBP20.27■□□□□ 0.84
SYNC-202ENST00000409190 AIMP1Q12904 312 aaKnown RBP20.27■□□□□ 0.84
SYNC-202ENST00000409190 RUFY3Q7L099 469 aa20.27■□□□□ 0.84
SYNC-202ENST00000409190 ADCK5Q3MIX3 580 aa20.26■□□□□ 0.83
SYNC-202ENST00000409190 MPRIPQ6WCQ1 1025 aa20.26■□□□□ 0.83
SYNC-202ENST00000409190 OVOS2A0A0J9YW53 1432 aa20.26■□□□□ 0.83
SYNC-202ENST00000409190 OVOS2Q6IE36 1432 aa20.26■□□□□ 0.83
SYNC-202ENST00000409190 ADCY5O95622 1261 aa20.26■□□□□ 0.83
SYNC-202ENST00000409190 SIL1Q9H173 461 aa20.26■□□□□ 0.83
SYNC-202ENST00000409190 PDCL3Q9H2J4 239 aa20.26■□□□□ 0.83
SYNC-202ENST00000409190 RIMBP3CA6NJZ7 1639 aa20.26■□□□□ 0.83
SYNC-202ENST00000409190 RIMBP3BA6NNM3 1639 aa20.26■□□□□ 0.83
SYNC-202ENST00000409190 RIMBP3Q9UFD9 1639 aa20.26■□□□□ 0.83
SYNC-202ENST00000409190 CEP170BQ9Y4F5 1589 aaPredicted RBP20.26■□□□□ 0.83
SYNC-202ENST00000409190 STX6O43752 255 aa20.26■□□□□ 0.83
SYNC-202ENST00000409190 ZNF500O60304 480 aaPredicted RBP20.26■□□□□ 0.83
SYNC-202ENST00000409190 HOXC9P31274 260 aa20.26■□□□□ 0.83
SYNC-202ENST00000409190 PTH1RQ03431 593 aa20.26■□□□□ 0.83
SYNC-202ENST00000409190 CNTROBQ8N137 903 aa20.26■□□□□ 0.83
SYNC-202ENST00000409190 ANAPC15P60006 121 aa20.25■□□□□ 0.83
SYNC-202ENST00000409190 COL9A3Q14050 684 aaPredicted RBP20.25■□□□□ 0.83
SYNC-202ENST00000409190 INTS4Q96HW7 963 aaKnown RBP20.25■□□□□ 0.83
SYNC-202ENST00000409190 SGSM2O43147 1006 aa20.25■□□□□ 0.83
SYNC-202ENST00000409190 CAMK4Q16566 473 aa20.25■□□□□ 0.83
SYNC-202ENST00000409190 PI4K2BQ8TCG2 481 aa20.25■□□□□ 0.83
SYNC-202ENST00000409190 KIAA2012Q0VF49 1180 aa20.25■□□□□ 0.83
SYNC-202ENST00000409190 C9orf78Q9NZ63 289 aaPredicted RBP20.25■□□□□ 0.83
SYNC-202ENST00000409190 TNRQ92752 1358 aa20.24■□□□□ 0.83
SYNC-202ENST00000409190 LRRC59Q96AG4 307 aaKnown RBP20.24■□□□□ 0.83
SYNC-202ENST00000409190 ZSCAN22P10073 491 aaPredicted RBP20.24■□□□□ 0.83
SYNC-202ENST00000409190 GJB2P29033 226 aa20.24■□□□□ 0.83
SYNC-202ENST00000409190 CWF19L2Q2TBE0 894 aaKnown RBP20.24■□□□□ 0.83
SYNC-202ENST00000409190 STAP2Q9UGK3 403 aa20.24■□□□□ 0.83
SYNC-202ENST00000409190 IGSF1Q8N6C5 1336 aa20.24■□□□□ 0.83
SYNC-202ENST00000409190 STK3Q13188 491 aa20.23■□□□□ 0.83
SYNC-202ENST00000409190 SSH3Q8TE77 659 aa20.23■□□□□ 0.83
SYNC-202ENST00000409190 PRDM10Q9NQV6 1147 aa20.23■□□□□ 0.83
SYNC-202ENST00000409190 HS1BP3Q53T59 392 aa20.23■□□□□ 0.83
SYNC-202ENST00000409190 KIF1BPQ96EK5 621 aa20.23■□□□□ 0.83
SYNC-202ENST00000409190 REREQ9P2R6 1566 aa20.23■□□□□ 0.83
SYNC-202ENST00000409190 TMEM2Q9UHN6 1383 aa20.23■□□□□ 0.83
SYNC-202ENST00000409190 EID1Q9Y6B2 187 aa20.23■□□□□ 0.83
SYNC-202ENST00000409190 SETD1BQ9UPS6 1966 aaKnown RBP20.23■□□□□ 0.83
SYNC-202ENST00000409190 SBNO1A3KN83 1393 aa20.23■□□□□ 0.83
SYNC-202ENST00000409190 ARHGEF10O15013 1369 aa20.23■□□□□ 0.83
SYNC-202ENST00000409190 PHF14O94880 888 aa20.23■□□□□ 0.83
SYNC-202ENST00000409190 CCDC8Q9H0W5 538 aaPredicted RBP20.23■□□□□ 0.83
SYNC-202ENST00000409190 PRAMEF22A3QJZ6 481 aa20.22■□□□□ 0.83
SYNC-202ENST00000409190 LIMCH1Q9UPQ0 1083 aa20.22■□□□□ 0.83
SYNC-202ENST00000409190 RAD50Q92878 1312 aa20.22■□□□□ 0.83
SYNC-202ENST00000409190 TEFQ10587 303 aa20.22■□□□□ 0.83
SYNC-202ENST00000409190 DNAAF4Q8WXU2 420 aa20.22■□□□□ 0.83
SYNC-202ENST00000409190 LSG1Q9H089 658 aaKnown RBP20.21■□□□□ 0.83
SYNC-202ENST00000409190 PEAK1Q9H792 1746 aa20.21■□□□□ 0.83
SYNC-202ENST00000409190 RPAP1Q9BWH6 1393 aaPredicted RBP20.21■□□□□ 0.83
SYNC-202ENST00000409190 IFIT2P09913 472 aaKnown RBP20.21■□□□□ 0.83
SYNC-202ENST00000409190 FOSBP53539 338 aa20.21■□□□□ 0.83
SYNC-202ENST00000409190 PDRG1Q9NUG6 133 aa20.21■□□□□ 0.83
SYNC-202ENST00000409190 PPFIA3O75145 1194 aa20.2■□□□□ 0.82
SYNC-202ENST00000409190 CCDC183Q5T5S1 534 aa20.2■□□□□ 0.82
SYNC-202ENST00000409190 KLHDC4Q8TBB5 520 aa20.2■□□□□ 0.82
SYNC-202ENST00000409190 AACSQ86V21 672 aa20.2■□□□□ 0.82
SYNC-202ENST00000409190 CLASRPQ8N2M8 674 aaKnown RBP20.2■□□□□ 0.82
SYNC-202ENST00000409190 TCHHQ07283 1943 aa20.2■□□□□ 0.82
SYNC-202ENST00000409190 F13A1P00488 732 aa20.2■□□□□ 0.82
SYNC-202ENST00000409190 CSPP1Q1MSJ5 1256 aa20.2■□□□□ 0.82
SYNC-202ENST00000409190 PROSER3Q2NL68 480 aa20.19■□□□□ 0.82
SYNC-202ENST00000409190 FAM227BQ96M60 508 aa20.19■□□□□ 0.82
SYNC-202ENST00000409190 MAP3K5Q99683 1374 aa20.19■□□□□ 0.82
SYNC-202ENST00000409190 TFIP11Q9UBB9 837 aaKnown RBP20.19■□□□□ 0.82
SYNC-202ENST00000409190 PPP6R1Q9UPN7 881 aa20.18■□□□□ 0.82
SYNC-202ENST00000409190 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms