RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 CALD1Q05682 793 aaKnown RBP13.9□□□□□ -0.18
NUP98-205ENST00000397007 KAT6BQ8WYB5 2073 aa13.9□□□□□ -0.18
NUP98-205ENST00000397007 PXDNLA1KZ92 1463 aa13.9□□□□□ -0.18
NUP98-205ENST00000397007 MYH3P11055 1940 aa13.9□□□□□ -0.18
NUP98-205ENST00000397007 RTF1Q92541 710 aaKnown RBP13.89□□□□□ -0.19
NUP98-205ENST00000397007 NBPF26B4DH59 902 aa13.89□□□□□ -0.19
NUP98-205ENST00000397007 NBPF14Q5TI25 921 aa13.89□□□□□ -0.19
NUP98-205ENST00000397007 NBPF10Q6P3W6 841 aaKnown RBP13.89□□□□□ -0.19
NUP98-205ENST00000397007 DEFB132Q7Z7B7 95 aa13.89□□□□□ -0.19
NUP98-205ENST00000397007 NBPF15Q8N660 670 aa13.89□□□□□ -0.19
NUP98-205ENST00000397007 LRRC37AA6NMS7 1700 aa13.89□□□□□ -0.19
NUP98-205ENST00000397007 APBA3O96018 575 aa13.89□□□□□ -0.19
NUP98-205ENST00000397007 EN1Q05925 392 aaPredicted RBP13.89□□□□□ -0.19
NUP98-205ENST00000397007 C8orf58Q8NAV2 365 aa13.89□□□□□ -0.19
NUP98-205ENST00000397007 E9PSI1 815 aa13.88□□□□□ -0.19
NUP98-205ENST00000397007 VAMP4O75379 141 aa13.88□□□□□ -0.19
NUP98-205ENST00000397007 CDCA7LQ96GN5 454 aa13.88□□□□□ -0.19
NUP98-205ENST00000397007 FMNL2Q96PY5 1086 aa13.88□□□□□ -0.19
NUP98-205ENST00000397007 MIS18AQ9NYP9 233 aa13.88□□□□□ -0.19
NUP98-205ENST00000397007 PNPLA7Q6ZV29 1317 aa13.88□□□□□ -0.19
NUP98-205ENST00000397007 TEFQ10587 303 aa13.87□□□□□ -0.19
NUP98-205ENST00000397007 TSPYL6Q8N831 410 aa13.87□□□□□ -0.19
NUP98-205ENST00000397007 KRT24Q2M2I5 525 aa13.87□□□□□ -0.19
NUP98-205ENST00000397007 EIF5P55010 431 aaKnown RBP13.87□□□□□ -0.19
NUP98-205ENST00000397007 LTBP1Q14766 1721 aa13.87□□□□□ -0.19
NUP98-205ENST00000397007 GOLGA2Q08379 1002 aa13.86□□□□□ -0.19
NUP98-205ENST00000397007 SGIP1Q9BQI5 828 aa13.86□□□□□ -0.19
NUP98-205ENST00000397007 USP16Q9Y5T5 823 aa13.86□□□□□ -0.19
NUP98-205ENST00000397007 SNRPA1P09661 255 aaKnown RBP13.86□□□□□ -0.19
NUP98-205ENST00000397007 ATP10DQ9P241 1426 aa13.86□□□□□ -0.19
NUP98-205ENST00000397007 RIC1Q4ADV7 1423 aa13.86□□□□□ -0.19
NUP98-205ENST00000397007 CT47B1P0C2W7 299 aaPredicted RBP13.86□□□□□ -0.19
NUP98-205ENST00000397007 BAG6P46379 1132 aa13.85□□□□□ -0.19
NUP98-205ENST00000397007 TSR2Q969E8 191 aaKnown RBP13.85□□□□□ -0.19
NUP98-205ENST00000397007 NEFMP07197 916 aa13.85□□□□□ -0.19
NUP98-205ENST00000397007 DNAJC10Q8IXB1 793 aa13.85□□□□□ -0.19
NUP98-205ENST00000397007 TSPYL4Q9UJ04 414 aa13.85□□□□□ -0.19
NUP98-205ENST00000397007 A0A0G2JS52 829 aa13.84□□□□□ -0.19
NUP98-205ENST00000397007 MYT1Q01538 1121 aa13.84□□□□□ -0.19
NUP98-205ENST00000397007 TEX13AQ9BXU3 409 aaPredicted RBP13.84□□□□□ -0.19
NUP98-205ENST00000397007 CCNL1Q9UK58 526 aaPredicted RBP13.84□□□□□ -0.19
NUP98-205ENST00000397007 CRKLP46109 303 aaKnown RBP13.84□□□□□ -0.19
NUP98-205ENST00000397007 ZNF646O15015 1829 aaPredicted RBP13.84□□□□□ -0.19
NUP98-205ENST00000397007 ARFGEF1Q9Y6D6 1849 aa13.84□□□□□ -0.19
NUP98-205ENST00000397007 BCL2L12Q9HB09 334 aa13.83□□□□□ -0.2
NUP98-205ENST00000397007 COL15A1P39059 1388 aa13.83□□□□□ -0.2
NUP98-205ENST00000397007 NEUROD2Q15784 382 aa13.83□□□□□ -0.2
NUP98-205ENST00000397007 RNF123Q5XPI4 1314 aa13.83□□□□□ -0.2
NUP98-205ENST00000397007 RPS6KA4O75676 772 aa13.83□□□□□ -0.2
NUP98-205ENST00000397007 ADRA2BP18089 450 aa13.83□□□□□ -0.2
NUP98-205ENST00000397007 SSFA2P28290 1259 aa13.83□□□□□ -0.2
NUP98-205ENST00000397007 SLC15A2Q16348 729 aa13.83□□□□□ -0.2
NUP98-205ENST00000397007 COL4A1P02462 1669 aa13.83□□□□□ -0.2
NUP98-205ENST00000397007 IL6STP40189 918 aaPredicted RBP13.82□□□□□ -0.2
NUP98-205ENST00000397007 ZNF428Q96B54 188 aa13.82□□□□□ -0.2
NUP98-205ENST00000397007 ATP6V1AP38606 617 aa13.82□□□□□ -0.2
NUP98-205ENST00000397007 ADCY9O60503 1353 aa13.81□□□□□ -0.2
NUP98-205ENST00000397007 KCNQ4P56696 695 aa13.81□□□□□ -0.2
NUP98-205ENST00000397007 PROSER3Q2NL68 480 aa13.81□□□□□ -0.2
NUP98-205ENST00000397007 MYH16Q9H6N6 1097 aa13.81□□□□□ -0.2
NUP98-205ENST00000397007 CCDC87Q9NVE4 849 aa13.81□□□□□ -0.2
NUP98-205ENST00000397007 ZBTB1Q9Y2K1 713 aa13.81□□□□□ -0.2
NUP98-205ENST00000397007 HMGB2P26583 209 aaKnown RBP13.8□□□□□ -0.2
NUP98-205ENST00000397007 EXOSC9Q06265 439 aaKnown RBP13.8□□□□□ -0.2
NUP98-205ENST00000397007 USP42Q9H9J4 1324 aaKnown RBP13.8□□□□□ -0.2
NUP98-205ENST00000397007 ALDH1L2Q3SY69 923 aa13.79□□□□□ -0.2
NUP98-205ENST00000397007 SYTL4Q96C24 671 aaPredicted RBP13.79□□□□□ -0.2
NUP98-205ENST00000397007 DDX21Q9NR30 783 aaKnown RBP eCLIP13.79□□□□□ -0.2
NUP98-205ENST00000397007 CAMTA2O94983 1202 aa13.79□□□□□ -0.2
NUP98-205ENST00000397007 HNRNPUQ00839 825 aaKnown RBP eCLIP13.79□□□□□ -0.2
NUP98-205ENST00000397007 TTC5Q8N0Z6 440 aa13.78□□□□□ -0.2
NUP98-205ENST00000397007 MRPL50Q8N5N7 158 aaKnown RBP13.78□□□□□ -0.2
NUP98-205ENST00000397007 PTCD1O75127 700 aaKnown RBP13.78□□□□□ -0.2
NUP98-205ENST00000397007 COL23A1Q86Y22 540 aaPredicted RBP13.78□□□□□ -0.2
NUP98-205ENST00000397007 C10orf71Q711Q0 1435 aa13.78□□□□□ -0.2
NUP98-205ENST00000397007 TWISTNBQ3B726 338 aaPredicted RBP13.77□□□□□ -0.2
NUP98-205ENST00000397007 A1BGP04217 495 aa13.77□□□□□ -0.21
NUP98-205ENST00000397007 TM4SF1P30408 202 aa13.77□□□□□ -0.21
NUP98-205ENST00000397007 PDGFDQ9GZP0 370 aaPredicted RBP13.76□□□□□ -0.21
NUP98-205ENST00000397007 ERVV-1B6SEH8 477 aa13.76□□□□□ -0.21
NUP98-205ENST00000397007 PTGER2P43116 358 aa13.76□□□□□ -0.21
NUP98-205ENST00000397007 RARSP54136 660 aaKnown RBP13.76□□□□□ -0.21
NUP98-205ENST00000397007 SENP3-EIF4A1A0A087X0R7 540 aa13.76□□□□□ -0.21
NUP98-205ENST00000397007 ARHGEF1Q92888 912 aaKnown RBP13.75□□□□□ -0.21
NUP98-205ENST00000397007 NARFQ9UHQ1 456 aa13.75□□□□□ -0.21
NUP98-205ENST00000397007 CHPF2Q9P2E5 772 aa13.75□□□□□ -0.21
NUP98-205ENST00000397007 SNED1Q8TER0 1413 aa13.75□□□□□ -0.21
NUP98-205ENST00000397007 CACNA1SQ13698 1873 aa13.75□□□□□ -0.21
NUP98-205ENST00000397007 STARD3NLO95772 234 aa13.75□□□□□ -0.21
NUP98-205ENST00000397007 SPEF2Q9C093 1822 aa13.74□□□□□ -0.21
NUP98-205ENST00000397007 GYS1P13807 737 aa13.74□□□□□ -0.21
NUP98-205ENST00000397007 ARAP2Q8WZ64 1704 aa13.74□□□□□ -0.21
NUP98-205ENST00000397007 RBM42Q9BTD8 480 aaKnown RBP13.74□□□□□ -0.21
NUP98-205ENST00000397007 DBF4Q9UBU7 674 aaPredicted RBP13.74□□□□□ -0.21
NUP98-205ENST00000397007 FER1L6Q2WGJ9 1857 aa13.73□□□□□ -0.21
NUP98-205ENST00000397007 ZNF34Q8IZ26 560 aa13.73□□□□□ -0.21
NUP98-205ENST00000397007 FLAD1Q8NFF5 587 aa13.73□□□□□ -0.21
NUP98-205ENST00000397007 ABCC4O15439 1325 aa13.73□□□□□ -0.21
NUP98-205ENST00000397007 MAP3K15Q6ZN16 1313 aa13.73□□□□□ -0.21
NUP98-205ENST00000397007 SF3B2Q13435 895 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms