RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 GIGYF1O75420 1035 aaPredicted RBP24.97■■□□□ 1.59
HOXA9-202ENST00000396345 INTS5Q6P9B9 1019 aaKnown RBP24.97■■□□□ 1.59
HOXA9-202ENST00000396345 USP16Q9Y5T5 823 aa24.97■■□□□ 1.59
HOXA9-202ENST00000396345 UBR3Q6ZT12 1888 aa24.97■■□□□ 1.59
HOXA9-202ENST00000396345 RTCBQ9Y3I0 505 aaKnown RBP24.96■■□□□ 1.59
HOXA9-202ENST00000396345 ZNF521Q96K83 1311 aa24.95■■□□□ 1.58
HOXA9-202ENST00000396345 RPS6KA4O75676 772 aa24.95■■□□□ 1.58
HOXA9-202ENST00000396345 PHF14O94880 888 aa24.95■■□□□ 1.58
HOXA9-202ENST00000396345 AMIGO3Q86WK7 504 aa24.95■■□□□ 1.58
HOXA9-202ENST00000396345 FLAD1Q8NFF5 587 aa24.95■■□□□ 1.58
HOXA9-202ENST00000396345 SSFA2P28290 1259 aa24.94■■□□□ 1.58
HOXA9-202ENST00000396345 SMIM5Q71RC9 77 aa24.94■■□□□ 1.58
HOXA9-202ENST00000396345 PDGFDQ9GZP0 370 aaPredicted RBP24.94■■□□□ 1.58
HOXA9-202ENST00000396345 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.93■■□□□ 1.58
HOXA9-202ENST00000396345 MSH5O43196 834 aa24.93■■□□□ 1.58
HOXA9-202ENST00000396345 COL23A1Q86Y22 540 aaPredicted RBP24.93■■□□□ 1.58
HOXA9-202ENST00000396345 TSR2Q969E8 191 aaKnown RBP24.93■■□□□ 1.58
HOXA9-202ENST00000396345 ZBTB1Q9Y2K1 713 aa24.93■■□□□ 1.58
HOXA9-202ENST00000396345 LAMB4A4D0S4 1761 aa24.93■■□□□ 1.58
HOXA9-202ENST00000396345 CASZ1Q86V15 1759 aa24.93■■□□□ 1.58
HOXA9-202ENST00000396345 KRT24Q2M2I5 525 aa24.92■■□□□ 1.58
HOXA9-202ENST00000396345 A1BGP04217 495 aa24.91■■□□□ 1.58
HOXA9-202ENST00000396345 CANXP27824 592 aaKnown RBP24.91■■□□□ 1.58
HOXA9-202ENST00000396345 TRAPPC3LQ5T215 181 aa24.91■■□□□ 1.58
HOXA9-202ENST00000396345 ADRA2BP18089 450 aa24.9■■□□□ 1.58
HOXA9-202ENST00000396345 SPINK5Q9NQ38 1064 aaPredicted RBP24.9■■□□□ 1.58
HOXA9-202ENST00000396345 SOS1Q07889 1333 aaPredicted RBP24.89■■□□□ 1.58
HOXA9-202ENST00000396345 HNRNPUQ00839 825 aaKnown RBP eCLIP24.89■■□□□ 1.58
HOXA9-202ENST00000396345 GOLGA2Q08379 1002 aa24.89■■□□□ 1.58
HOXA9-202ENST00000396345 MYH16Q9H6N6 1097 aa24.89■■□□□ 1.58
HOXA9-202ENST00000396345 FANCIQ9NVI1 1328 aa24.88■■□□□ 1.57
HOXA9-202ENST00000396345 EIF2S2P20042 333 aaKnown RBP24.88■■□□□ 1.57
HOXA9-202ENST00000396345 DUSP27Q5VZP5 1158 aa24.88■■□□□ 1.57
HOXA9-202ENST00000396345 ARHGEF1Q92888 912 aaKnown RBP24.88■■□□□ 1.57
HOXA9-202ENST00000396345 HOXB7P09629 217 aa24.87■■□□□ 1.57
HOXA9-202ENST00000396345 C8orf58Q8NAV2 365 aa24.87■■□□□ 1.57
HOXA9-202ENST00000396345 SLC16A10Q8TF71 515 aa24.87■■□□□ 1.57
HOXA9-202ENST00000396345 ZBTB7AO95365 584 aa24.86■■□□□ 1.57
HOXA9-202ENST00000396345 RFC4P35249 363 aa24.86■■□□□ 1.57
HOXA9-202ENST00000396345 IL6STP40189 918 aaPredicted RBP24.86■■□□□ 1.57
HOXA9-202ENST00000396345 PIP4K2AP48426 406 aaPredicted RBP24.86■■□□□ 1.57
HOXA9-202ENST00000396345 EIF5P55010 431 aaKnown RBP24.86■■□□□ 1.57
HOXA9-202ENST00000396345 LRP5O75197 1615 aa24.86■■□□□ 1.57
HOXA9-202ENST00000396345 COL15A1P39059 1388 aa24.85■■□□□ 1.57
HOXA9-202ENST00000396345 NBPF26B4DH59 902 aa24.85■■□□□ 1.57
HOXA9-202ENST00000396345 ELL2O00472 640 aaPredicted RBP24.85■■□□□ 1.57
HOXA9-202ENST00000396345 NBPF10Q6P3W6 841 aaKnown RBP24.85■■□□□ 1.57
HOXA9-202ENST00000396345 NBPF15Q8N660 670 aa24.85■■□□□ 1.57
HOXA9-202ENST00000396345 ZNF330Q9Y3S2 320 aaPredicted RBP24.85■■□□□ 1.57
HOXA9-202ENST00000396345 E9PSI1 815 aa24.84■■□□□ 1.57
HOXA9-202ENST00000396345 NPM2Q86SE8 214 aaKnown RBP24.84■■□□□ 1.57
HOXA9-202ENST00000396345 NECTIN2Q92692 538 aa24.84■■□□□ 1.57
HOXA9-202ENST00000396345 A0A087WZG4 1122 aa24.83■■□□□ 1.57
HOXA9-202ENST00000396345 HDGFL1Q5TGJ6 251 aa24.83■■□□□ 1.57
HOXA9-202ENST00000396345 MTFR1LQ9H019 292 aa24.83■■□□□ 1.57
HOXA9-202ENST00000396345 ERBB4Q15303 1308 aa24.83■■□□□ 1.56
HOXA9-202ENST00000396345 C4AP0C0L4 1744 aa24.82■■□□□ 1.56
HOXA9-202ENST00000396345 SLFN5Q08AF3 891 aa24.82■■□□□ 1.56
HOXA9-202ENST00000396345 TSPYL6Q8N831 410 aa24.82■■□□□ 1.56
HOXA9-202ENST00000396345 ATF5Q9Y2D1 282 aaPredicted RBP24.82■■□□□ 1.56
HOXA9-202ENST00000396345 EXOSC9Q06265 439 aaKnown RBP24.81■■□□□ 1.56
HOXA9-202ENST00000396345 CDCA7LQ96GN5 454 aa24.81■■□□□ 1.56
HOXA9-202ENST00000396345 ZPR1O75312 459 aa24.8■■□□□ 1.56
HOXA9-202ENST00000396345 MYL6BP14649 208 aa24.8■■□□□ 1.56
HOXA9-202ENST00000396345 TWISTNBQ3B726 338 aaPredicted RBP24.8■■□□□ 1.56
HOXA9-202ENST00000396345 SPON1Q9HCB6 807 aa24.8■■□□□ 1.56
HOXA9-202ENST00000396345 SRP68Q9UHB9 627 aaKnown RBP24.8■■□□□ 1.56
HOXA9-202ENST00000396345 ARXQ96QS3 562 aa24.79■■□□□ 1.56
HOXA9-202ENST00000396345 CHMP4AQ9BY43 222 aa24.79■■□□□ 1.56
HOXA9-202ENST00000396345 NARFQ9UHQ1 456 aa24.79■■□□□ 1.56
HOXA9-202ENST00000396345 USP42Q9H9J4 1324 aaKnown RBP24.79■■□□□ 1.56
HOXA9-202ENST00000396345 PDIA6Q15084 440 aa24.78■■□□□ 1.56
HOXA9-202ENST00000396345 MSL1Q68DK7 614 aa24.78■■□□□ 1.56
HOXA9-202ENST00000396345 TBC1D2BQ9UPU7 963 aa24.78■■□□□ 1.56
HOXA9-202ENST00000396345 USPL1Q5W0Q7 1092 aa24.77■■□□□ 1.56
HOXA9-202ENST00000396345 CHPF2Q9P2E5 772 aa24.77■■□□□ 1.56
HOXA9-202ENST00000396345 ANXA1P04083 346 aa24.76■■□□□ 1.55
HOXA9-202ENST00000396345 GYS1P13807 737 aa24.76■■□□□ 1.55
HOXA9-202ENST00000396345 PROSER3Q2NL68 480 aa24.76■■□□□ 1.55
HOXA9-202ENST00000396345 DZIP3Q86Y13 1208 aaKnown RBP24.76■■□□□ 1.55
HOXA9-202ENST00000396345 DDX21Q9NR30 783 aaKnown RBP eCLIP24.76■■□□□ 1.55
HOXA9-202ENST00000396345 CCDC30Q5VVM6 783 aa24.75■■□□□ 1.55
HOXA9-202ENST00000396345 TRMT2AQ8IZ69 625 aaKnown RBP24.75■■□□□ 1.55
HOXA9-202ENST00000396345 NLGN1Q8N2Q7 840 aa24.75■■□□□ 1.55
HOXA9-202ENST00000396345 DBF4Q9UBU7 674 aaPredicted RBP24.75■■□□□ 1.55
HOXA9-202ENST00000396345 ZBED9Q6R2W3 1325 aa24.75■■□□□ 1.55
HOXA9-202ENST00000396345 VAMP4O75379 141 aa24.74■■□□□ 1.55
HOXA9-202ENST00000396345 COL24A1Q17RW2 1714 aa24.73■■□□□ 1.55
HOXA9-202ENST00000396345 POLD1P28340 1107 aa24.73■■□□□ 1.55
HOXA9-202ENST00000396345 PTGER2P43116 358 aa24.73■■□□□ 1.55
HOXA9-202ENST00000396345 LRP10Q7Z4F1 713 aa24.73■■□□□ 1.55
HOXA9-202ENST00000396345 CAMTA2O94983 1202 aa24.72■■□□□ 1.55
HOXA9-202ENST00000396345 FKBP8Q14318 412 aa24.72■■□□□ 1.55
HOXA9-202ENST00000396345 HYPKQ9NX55 129 aa24.72■■□□□ 1.55
HOXA9-202ENST00000396345 KIF6Q6ZMV9 814 aa24.71■■□□□ 1.55
HOXA9-202ENST00000396345 TTLL7Q6ZT98 887 aa24.71■■□□□ 1.55
HOXA9-202ENST00000396345 SGIP1Q9BQI5 828 aa24.71■■□□□ 1.55
HOXA9-202ENST00000396345 BCL2L12Q9HB09 334 aa24.71■■□□□ 1.55
HOXA9-202ENST00000396345 SCN7AQ01118 1682 aa24.71■■□□□ 1.55
HOXA9-202ENST00000396345 XAGE3Q8WTP9 111 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms