RNA–Protein interactions for RNA: ENST00000393955.6

PC-201, Transcript of pyruvate carboxylase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PC, Length 4,004 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PC-201ENST00000393955 NWD1Q149M9 1564 aa11.83□□□□□ -0.51
PC-201ENST00000393955 CHPF2Q9P2E5 772 aa11.83□□□□□ -0.52
PC-201ENST00000393955 DIP2AQ14689 1571 aa11.83□□□□□ -0.52
PC-201ENST00000393955 CLASRPQ8N2M8 674 aaKnown RBP11.83□□□□□ -0.52
PC-201ENST00000393955 C19orf44Q9H6X5 657 aa11.83□□□□□ -0.52
PC-201ENST00000393955 PHAXQ9H814 394 aaKnown RBP11.83□□□□□ -0.52
PC-201ENST00000393955 SDSP20132 328 aa11.83□□□□□ -0.52
PC-201ENST00000393955 NFATC2IPQ8NCF5 419 aa11.83□□□□□ -0.52
PC-201ENST00000393955 MYD88Q99836 296 aa11.82□□□□□ -0.52
PC-201ENST00000393955 CHMP5Q9NZZ3 219 aa11.82□□□□□ -0.52
PC-201ENST00000393955 APPP05067 770 aa11.82□□□□□ -0.52
PC-201ENST00000393955 GPTP24298 496 aa11.82□□□□□ -0.52
PC-201ENST00000393955 TTC22Q5TAA0 569 aa11.82□□□□□ -0.52
PC-201ENST00000393955 NBPF6Q5VWK0 638 aa11.82□□□□□ -0.52
PC-201ENST00000393955 IL17REQ8NFR9 667 aa11.82□□□□□ -0.52
PC-201ENST00000393955 NBPF4Q96M43 638 aa11.82□□□□□ -0.52
PC-201ENST00000393955 LARP6Q9BRS8 491 aaKnown RBP11.82□□□□□ -0.52
PC-201ENST00000393955 GAS2L3Q86XJ1 694 aa11.82□□□□□ -0.52
PC-201ENST00000393955 ACSBG1Q96GR2 724 aa11.82□□□□□ -0.52
PC-201ENST00000393955 RRAGDQ9NQL2 400 aaPredicted RBP11.82□□□□□ -0.52
PC-201ENST00000393955 PNMA6EA0A0J9YXQ4 647 aa11.81□□□□□ -0.52
PC-201ENST00000393955 TRAK2O60296 914 aa11.81□□□□□ -0.52
PC-201ENST00000393955 CHMP4CQ96CF2 233 aa11.81□□□□□ -0.52
PC-201ENST00000393955 ST18O60284 1047 aa11.81□□□□□ -0.52
PC-201ENST00000393955 SSFA2P28290 1259 aa11.81□□□□□ -0.52
PC-201ENST00000393955 CCT4P50991 539 aaKnown RBP11.81□□□□□ -0.52
PC-201ENST00000393955 TRIM44Q96DX7 344 aaPredicted RBP11.81□□□□□ -0.52
PC-201ENST00000393955 GOLGA6L4A6NEF3 574 aa11.81□□□□□ -0.52
PC-201ENST00000393955 SNX21Q969T3 373 aa11.81□□□□□ -0.52
PC-201ENST00000393955 IL25Q9H293 177 aa11.81□□□□□ -0.52
PC-201ENST00000393955 HDAC5Q9UQL6 1122 aa11.81□□□□□ -0.52
PC-201ENST00000393955 CDC45O75419 566 aa11.8□□□□□ -0.52
PC-201ENST00000393955 LRRCC1Q9C099 1032 aa11.8□□□□□ -0.52
PC-201ENST00000393955 KDRP35968 1356 aa11.8□□□□□ -0.52
PC-201ENST00000393955 FSD2A1L4K1 749 aa11.8□□□□□ -0.52
PC-201ENST00000393955 IGSF1Q8N6C5 1336 aa11.8□□□□□ -0.52
PC-201ENST00000393955 KCNQ3O43525 872 aa11.8□□□□□ -0.52
PC-201ENST00000393955 PTMAP06454 111 aaKnown RBP11.8□□□□□ -0.52
PC-201ENST00000393955 NEK4P51957 841 aa11.8□□□□□ -0.52
PC-201ENST00000393955 FSD1Q9BTV5 496 aa11.8□□□□□ -0.52
PC-201ENST00000393955 CCDC8Q9H0W5 538 aaPredicted RBP11.8□□□□□ -0.52
PC-201ENST00000393955 KIAA0232Q92628 1395 aa11.79□□□□□ -0.52
PC-201ENST00000393955 REC8O95072 547 aa11.79□□□□□ -0.52
PC-201ENST00000393955 AACSQ86V21 672 aa11.79□□□□□ -0.52
PC-201ENST00000393955 USP26Q9BXU7 913 aa11.79□□□□□ -0.52
PC-201ENST00000393955 MAP3K2Q9Y2U5 619 aa11.79□□□□□ -0.52
PC-201ENST00000393955 RGPD2P0DJD1 1756 aa11.79□□□□□ -0.52
PC-201ENST00000393955 WASHC4Q2M389 1173 aa11.78□□□□□ -0.52
PC-201ENST00000393955 CWF19L2Q2TBE0 894 aaKnown RBP11.78□□□□□ -0.52
PC-201ENST00000393955 CWC27Q6UX04 472 aaKnown RBP11.78□□□□□ -0.52
PC-201ENST00000393955 UNC5CLQ8IV45 518 aa11.78□□□□□ -0.52
PC-201ENST00000393955 NGLY1Q96IV0 654 aa11.78□□□□□ -0.52
PC-201ENST00000393955 UPF3BQ9BZI7 483 aaKnown RBP11.78□□□□□ -0.52
PC-201ENST00000393955 ARHGAP23Q9P227 1491 aa11.78□□□□□ -0.52
PC-201ENST00000393955 SBNO1A3KN83 1393 aa11.78□□□□□ -0.52
PC-201ENST00000393955 TTC21AQ8NDW8 1320 aa11.78□□□□□ -0.52
PC-201ENST00000393955 ZGPATQ8N5A5 531 aaKnown RBP11.78□□□□□ -0.52
PC-201ENST00000393955 XRN1Q8IZH2 1706 aaKnown RBP11.78□□□□□ -0.52
PC-201ENST00000393955 ARHGEF10O15013 1369 aa11.78□□□□□ -0.52
PC-201ENST00000393955 FLT4P35916 1363 aa11.78□□□□□ -0.52
PC-201ENST00000393955 DNAAF4Q8WXU2 420 aa11.77□□□□□ -0.52
PC-201ENST00000393955 TUBGCP6Q96RT7 1819 aa11.77□□□□□ -0.52
PC-201ENST00000393955 DTNBO60941 627 aa11.77□□□□□ -0.53
PC-201ENST00000393955 RAB3GAP1Q15042 981 aa11.77□□□□□ -0.53
PC-201ENST00000393955 UBE3BQ7Z3V4 1068 aa11.77□□□□□ -0.53
PC-201ENST00000393955 GBP4Q96PP9 640 aa11.77□□□□□ -0.53
PC-201ENST00000393955 BOLA2Q9H3K6 86 aa11.77□□□□□ -0.53
PC-201ENST00000393955 FAM208AQ9UK61 1670 aaKnown RBP11.77□□□□□ -0.53
PC-201ENST00000393955 K7ELQ4 463 aaPredicted RBP11.76□□□□□ -0.53
PC-201ENST00000393955 TMOD3Q9NYL9 352 aa11.76□□□□□ -0.53
PC-201ENST00000393955 PA2G4Q9UQ80 394 aaKnown RBP11.76□□□□□ -0.53
PC-201ENST00000393955 SLIT1O75093 1534 aa11.76□□□□□ -0.53
PC-201ENST00000393955 NAP1L5Q96NT1 182 aaPredicted RBP11.76□□□□□ -0.53
PC-201ENST00000393955 MTMR7Q9Y216 660 aa11.76□□□□□ -0.53
PC-201ENST00000393955 LRRC37A3O60309 1634 aa11.76□□□□□ -0.53
PC-201ENST00000393955 COPS6Q7L5N1 327 aa11.76□□□□□ -0.53
PC-201ENST00000393955 FBXW7Q969H0 707 aa11.76□□□□□ -0.53
PC-201ENST00000393955 SALL3Q9BXA9 1300 aa11.76□□□□□ -0.53
PC-201ENST00000393955 PPFIA3O75145 1194 aa11.76□□□□□ -0.53
PC-201ENST00000393955 FKBP4Q02790 459 aaKnown RBP eCLIP11.76□□□□□ -0.533e-6■■■■□ 20.3
PC-201ENST00000393955 AMOTQ4VCS5 1084 aa11.76□□□□□ -0.53
PC-201ENST00000393955 PPP1R42Q7Z4L9 355 aa11.76□□□□□ -0.53
PC-201ENST00000393955 KLHL34Q8N239 644 aa11.76□□□□□ -0.53
PC-201ENST00000393955 A0A087WZG4 1122 aa11.75□□□□□ -0.53
PC-201ENST00000393955 GNL2Q13823 731 aaKnown RBP11.75□□□□□ -0.53
PC-201ENST00000393955 PALD1Q9ULE6 856 aa11.75□□□□□ -0.53
PC-201ENST00000393955 NPHP3Q7Z494 1330 aa11.75□□□□□ -0.53
PC-201ENST00000393955 KIF24Q5T7B8 1368 aa11.75□□□□□ -0.53
PC-201ENST00000393955 IFNL2Q8IZJ0 200 aa11.75□□□□□ -0.53
PC-201ENST00000393955 XAGE3Q8WTP9 111 aa11.75□□□□□ -0.53
PC-201ENST00000393955 PTPRCP08575 1304 aa11.75□□□□□ -0.53
PC-201ENST00000393955 VPS37DQ86XT2 251 aa11.75□□□□□ -0.53
PC-201ENST00000393955 DDX49Q9Y6V7 483 aaKnown RBP11.75□□□□□ -0.53
PC-201ENST00000393955 VPS37CA5D8V6 355 aaPredicted RBP11.74□□□□□ -0.53
PC-201ENST00000393955 UBAP1LF5GYI3 381 aa11.74□□□□□ -0.53
PC-201ENST00000393955 PDE1AP54750 535 aa11.74□□□□□ -0.53
PC-201ENST00000393955 RPAP2Q8IXW5 612 aaPredicted RBP11.74□□□□□ -0.53
PC-201ENST00000393955 DBF4Q9UBU7 674 aaPredicted RBP11.74□□□□□ -0.53
PC-201ENST00000393955 PRAMEF22A3QJZ6 481 aa11.74□□□□□ -0.53
PC-201ENST00000393955 MCTP1Q6DN14 999 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 557.1 ms