RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 SOGA3Q5TF21 947 aa14.86□□□□□ -0.03
CLTC-202ENST00000393043 YTHDC2Q9H6S0 1430 aaKnown RBP14.86□□□□□ -0.03
CLTC-202ENST00000393043 NAP1L1P55209 391 aaKnown RBP14.86□□□□□ -0.03
CLTC-202ENST00000393043 CBFA2T2O43439 604 aa14.86□□□□□ -0.03
CLTC-202ENST00000393043 STIM1Q13586 685 aa14.86□□□□□ -0.03
CLTC-202ENST00000393043 MAP3K11Q16584 847 aa14.86□□□□□ -0.03
CLTC-202ENST00000393043 SAMD1Q6SPF0 538 aaPredicted RBP14.86□□□□□ -0.03
CLTC-202ENST00000393043 CCAR1Q8IX12 1150 aaKnown RBP14.85□□□□□ -0.03
CLTC-202ENST00000393043 INSRP06213 1382 aa14.85□□□□□ -0.03
CLTC-202ENST00000393043 ANKRD18BA2A2Z9 1011 aa14.85□□□□□ -0.03
CLTC-202ENST00000393043 CAVIN4Q5BKX8 364 aa14.85□□□□□ -0.03
CLTC-202ENST00000393043 MAP3K12Q12852 859 aa14.85□□□□□ -0.03
CLTC-202ENST00000393043 SPC24Q8NBT2 197 aa14.85□□□□□ -0.03
CLTC-202ENST00000393043 CWC25Q9NXE8 425 aaPredicted RBP14.85□□□□□ -0.03
CLTC-202ENST00000393043 ALDH1L1O75891 902 aa14.85□□□□□ -0.03
CLTC-202ENST00000393043 AKAP4Q5JQC9 854 aa14.85□□□□□ -0.03
CLTC-202ENST00000393043 C8orf58Q8NAV2 365 aa14.85□□□□□ -0.03
CLTC-202ENST00000393043 DDX11Q96FC9 970 aa14.85□□□□□ -0.03
CLTC-202ENST00000393043 TRMT112Q9UI30 125 aaKnown RBP14.85□□□□□ -0.03
CLTC-202ENST00000393043 TRPM2O94759 1503 aa14.84□□□□□ -0.03
CLTC-202ENST00000393043 MEIS3Q99687 375 aa14.84□□□□□ -0.03
CLTC-202ENST00000393043 CEP131Q9UPN4 1083 aa14.84□□□□□ -0.03
CLTC-202ENST00000393043 CCDC196A0A1B0GTZ2 297 aa14.84□□□□□ -0.03
CLTC-202ENST00000393043 EXOC5O00471 708 aa14.84□□□□□ -0.03
CLTC-202ENST00000393043 SLC5A1P13866 664 aa14.84□□□□□ -0.03
CLTC-202ENST00000393043 STK11IPQ8N1F8 1099 aa14.84□□□□□ -0.03
CLTC-202ENST00000393043 TNPO1Q92973 898 aaKnown RBP14.84□□□□□ -0.03
CLTC-202ENST00000393043 ABCF2Q9UG63 623 aa14.84□□□□□ -0.03
CLTC-202ENST00000393043 RHPN1Q8TCX5 695 aa14.84□□□□□ -0.03
CLTC-202ENST00000393043 ZNF287Q9HBT7 754 aa14.83□□□□□ -0.03
CLTC-202ENST00000393043 SOS1Q07889 1333 aaPredicted RBP14.83□□□□□ -0.04
CLTC-202ENST00000393043 NAPBQ9H115 298 aa14.83□□□□□ -0.04
CLTC-202ENST00000393043 GCC2Q8IWJ2 1684 aa14.83□□□□□ -0.04
CLTC-202ENST00000393043 SMTNL1A8MU46 457 aa14.83□□□□□ -0.04
CLTC-202ENST00000393043 VAMP4O75379 141 aa14.83□□□□□ -0.04
CLTC-202ENST00000393043 SYCE3A1L190 88 aa14.83□□□□□ -0.04
CLTC-202ENST00000393043 CCDC183Q5T5S1 534 aa14.83□□□□□ -0.04
CLTC-202ENST00000393043 HMG20BQ9P0W2 317 aa14.83□□□□□ -0.04
CLTC-202ENST00000393043 ANKRD13DQ6ZTN6 518 aa14.82□□□□□ -0.04
CLTC-202ENST00000393043 NPHP3Q7Z494 1330 aa14.82□□□□□ -0.04
CLTC-202ENST00000393043 ESPNB1AK53 854 aa14.82□□□□□ -0.04
CLTC-202ENST00000393043 SSFA2P28290 1259 aa14.82□□□□□ -0.04
CLTC-202ENST00000393043 BICDL1Q6ZP65 573 aa14.82□□□□□ -0.04
CLTC-202ENST00000393043 ZNF771Q7L3S4 317 aaPredicted RBP14.82□□□□□ -0.04
CLTC-202ENST00000393043 KRT18P05783 430 aaKnown RBP14.82□□□□□ -0.04
CLTC-202ENST00000393043 FERMT3Q86UX7 667 aa14.82□□□□□ -0.04
CLTC-202ENST00000393043 PPFIBP1Q86W92 1011 aa14.82□□□□□ -0.04
CLTC-202ENST00000393043 ZNHIT6Q9NWK9 470 aaKnown RBP14.82□□□□□ -0.04
CLTC-202ENST00000393043 ATP8B2P98198 1209 aa14.82□□□□□ -0.04
CLTC-202ENST00000393043 SPINK5Q9NQ38 1064 aaPredicted RBP14.82□□□□□ -0.04
CLTC-202ENST00000393043 ZNF213O14771 459 aa14.81□□□□□ -0.04
CLTC-202ENST00000393043 RUFY1Q96T51 708 aa14.81□□□□□ -0.04
CLTC-202ENST00000393043 ZBTB3Q9H5J0 574 aa14.81□□□□□ -0.04
CLTC-202ENST00000393043 ZMYM3Q14202 1370 aa14.81□□□□□ -0.04
CLTC-202ENST00000393043 ZPR1O75312 459 aa14.81□□□□□ -0.04
CLTC-202ENST00000393043 TTF1Q15361 905 aaPredicted RBP14.81□□□□□ -0.04
CLTC-202ENST00000393043 HSP90B2PQ58FF3 399 aa14.81□□□□□ -0.04
CLTC-202ENST00000393043 UBE3BQ7Z3V4 1068 aa14.81□□□□□ -0.04
CLTC-202ENST00000393043 DMRT2Q9Y5R5 561 aa14.81□□□□□ -0.04
CLTC-202ENST00000393043 MSH6P52701 1360 aa14.81□□□□□ -0.04
CLTC-202ENST00000393043 ARHGEF5Q12774 1597 aa14.81□□□□□ -0.04
CLTC-202ENST00000393043 CEP170Q5SW79 1584 aa14.81□□□□□ -0.04
CLTC-202ENST00000393043 ATP2B2Q01814 1243 aa14.81□□□□□ -0.04
CLTC-202ENST00000393043 AK7Q96M32 723 aa14.81□□□□□ -0.04
CLTC-202ENST00000393043 CHPF2Q9P2E5 772 aa14.81□□□□□ -0.04
CLTC-202ENST00000393043 SDSP20132 328 aa14.81□□□□□ -0.04
CLTC-202ENST00000393043 PIP4K2BP78356 416 aa14.81□□□□□ -0.04
CLTC-202ENST00000393043 MTHFSDQ2M296 383 aaKnown RBP14.81□□□□□ -0.04
CLTC-202ENST00000393043 RNF41Q9H4P4 317 aaPredicted RBP14.81□□□□□ -0.04
CLTC-202ENST00000393043 PDE1AP54750 535 aa14.8□□□□□ -0.04
CLTC-202ENST00000393043 ERCC4Q92889 916 aaPredicted RBP14.8□□□□□ -0.04
CLTC-202ENST00000393043 ADGBQ8N7X0 1667 aa14.8□□□□□ -0.04
CLTC-202ENST00000393043 BRPF1P55201 1214 aaPredicted RBP14.8□□□□□ -0.04
CLTC-202ENST00000393043 TBX22Q9Y458 520 aa14.8□□□□□ -0.04
CLTC-202ENST00000393043 ANAPC15P60006 121 aa14.8□□□□□ -0.04
CLTC-202ENST00000393043 ZRANB1Q9UGI0 708 aa14.8□□□□□ -0.04
CLTC-202ENST00000393043 KSR2Q6VAB6 950 aa14.8□□□□□ -0.04
CLTC-202ENST00000393043 C8orf76Q96K31 380 aa14.8□□□□□ -0.04
CLTC-202ENST00000393043 CDR1P51861 262 aa14.79□□□□□ -0.04
CLTC-202ENST00000393043 CT47A1Q5JQC4 288 aaPredicted RBP14.79□□□□□ -0.04
CLTC-202ENST00000393043 KLHL34Q8N239 644 aa14.79□□□□□ -0.04
CLTC-202ENST00000393043 CAGE1Q8TC20 777 aa14.79□□□□□ -0.04
CLTC-202ENST00000393043 MAGI3Q5TCQ9 1506 aa14.79□□□□□ -0.04
CLTC-202ENST00000393043 ZBTB40Q9NUA8 1239 aa14.79□□□□□ -0.04
CLTC-202ENST00000393043 DCTPP1Q9H773 170 aa14.79□□□□□ -0.04
CLTC-202ENST00000393043 CTAGE5O15320 804 aa14.78□□□□□ -0.04
CLTC-202ENST00000393043 ZSCAN30Q86W11 494 aa14.78□□□□□ -0.04
CLTC-202ENST00000393043 SMC5Q8IY18 1101 aa14.78□□□□□ -0.04
CLTC-202ENST00000393043 ATP5J2-PTCD1G3V325 749 aa14.78□□□□□ -0.04
CLTC-202ENST00000393043 LDHAL6AQ6ZMR3 332 aa14.78□□□□□ -0.04
CLTC-202ENST00000393043 ATP10AO60312 1499 aa14.78□□□□□ -0.04
CLTC-202ENST00000393043 EDC4Q6P2E9 1401 aaKnown RBP14.78□□□□□ -0.04
CLTC-202ENST00000393043 MAP3K5Q99683 1374 aa14.78□□□□□ -0.04
CLTC-202ENST00000393043 C8orf34Q49A92 452 aa14.78□□□□□ -0.04
CLTC-202ENST00000393043 LUC7LQ9NQ29 371 aaKnown RBP14.78□□□□□ -0.04
CLTC-202ENST00000393043 GRM8O00222 908 aa14.78□□□□□ -0.04
CLTC-202ENST00000393043 TXLNBQ8N3L3 684 aa14.78□□□□□ -0.04
CLTC-202ENST00000393043 BMP2KQ9NSY1 1161 aaPredicted RBP14.78□□□□□ -0.04
CLTC-202ENST00000393043 ANO10Q9NW15 660 aa14.78□□□□□ -0.04
CLTC-202ENST00000393043 TARBP1Q13395 1621 aaKnown RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms