RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 STARD3NLO95772 234 aa25.94■■□□□ 1.74
DDR1-228ENST00000376575 AK7Q96M32 723 aa25.94■■□□□ 1.74
DDR1-228ENST00000376575 LAS1LQ9Y4W2 734 aaKnown RBP25.94■■□□□ 1.74
DDR1-228ENST00000376575 USP16Q9Y5T5 823 aa25.94■■□□□ 1.74
DDR1-228ENST00000376575 RPS6KA4O75676 772 aa25.93■■□□□ 1.74
DDR1-228ENST00000376575 LAMB4A4D0S4 1761 aa25.92■■□□□ 1.74
DDR1-228ENST00000376575 SSFA2P28290 1259 aa25.92■■□□□ 1.74
DDR1-228ENST00000376575 PDGFDQ9GZP0 370 aaPredicted RBP25.92■■□□□ 1.74
DDR1-228ENST00000376575 CCDC87Q9NVE4 849 aa25.92■■□□□ 1.74
DDR1-228ENST00000376575 GNPATO15228 680 aa25.91■■□□□ 1.74
DDR1-228ENST00000376575 COL23A1Q86Y22 540 aaPredicted RBP25.9■■□□□ 1.74
DDR1-228ENST00000376575 FLAD1Q8NFF5 587 aa25.9■■□□□ 1.74
DDR1-228ENST00000376575 SPINK5Q9NQ38 1064 aaPredicted RBP25.9■■□□□ 1.74
DDR1-228ENST00000376575 ADRA2BP18089 450 aa25.89■■□□□ 1.74
DDR1-228ENST00000376575 ZBTB1Q9Y2K1 713 aa25.89■■□□□ 1.74
DDR1-228ENST00000376575 RTCBQ9Y3I0 505 aaKnown RBP25.89■■□□□ 1.74
DDR1-228ENST00000376575 SOS1Q07889 1333 aaPredicted RBP25.88■■□□□ 1.73
DDR1-228ENST00000376575 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.88■■□□□ 1.73
DDR1-228ENST00000376575 HOXB7P09629 217 aa25.88■■□□□ 1.73
DDR1-228ENST00000376575 KRT24Q2M2I5 525 aa25.88■■□□□ 1.73
DDR1-228ENST00000376575 SMIM5Q71RC9 77 aa25.87■■□□□ 1.73
DDR1-228ENST00000376575 A1BGP04217 495 aa25.86■■□□□ 1.73
DDR1-228ENST00000376575 EIF5P55010 431 aaKnown RBP25.86■■□□□ 1.73
DDR1-228ENST00000376575 SLC16A10Q8TF71 515 aa25.85■■□□□ 1.73
DDR1-228ENST00000376575 TSR2Q969E8 191 aaKnown RBP25.85■■□□□ 1.73
DDR1-228ENST00000376575 COL24A1Q17RW2 1714 aa25.85■■□□□ 1.73
DDR1-228ENST00000376575 FANCIQ9NVI1 1328 aa25.85■■□□□ 1.73
DDR1-228ENST00000376575 NBPF26B4DH59 902 aa25.84■■□□□ 1.73
DDR1-228ENST00000376575 C4AP0C0L4 1744 aa25.84■■□□□ 1.73
DDR1-228ENST00000376575 IL6STP40189 918 aaPredicted RBP25.84■■□□□ 1.73
DDR1-228ENST00000376575 TRAPPC3LQ5T215 181 aa25.84■■□□□ 1.73
DDR1-228ENST00000376575 NBPF10Q6P3W6 841 aaKnown RBP25.84■■□□□ 1.73
DDR1-228ENST00000376575 NBPF15Q8N660 670 aa25.84■■□□□ 1.73
DDR1-228ENST00000376575 ARHGEF1Q92888 912 aaKnown RBP25.84■■□□□ 1.73
DDR1-228ENST00000376575 DUSP27Q5VZP5 1158 aa25.83■■□□□ 1.73
DDR1-228ENST00000376575 C8orf58Q8NAV2 365 aa25.83■■□□□ 1.73
DDR1-228ENST00000376575 PHF14O94880 888 aa25.82■■□□□ 1.72
DDR1-228ENST00000376575 GOLGA2Q08379 1002 aa25.82■■□□□ 1.72
DDR1-228ENST00000376575 ERBB4Q15303 1308 aa25.82■■□□□ 1.72
DDR1-228ENST00000376575 SRCAPQ6ZRS2 3230 aa25.81■■□□□ 1.72
DDR1-228ENST00000376575 CANXP27824 592 aaKnown RBP25.81■■□□□ 1.72
DDR1-228ENST00000376575 TRMT2AQ8IZ69 625 aaKnown RBP25.81■■□□□ 1.72
DDR1-228ENST00000376575 MYH16Q9H6N6 1097 aa25.81■■□□□ 1.72
DDR1-228ENST00000376575 COL15A1P39059 1388 aa25.81■■□□□ 1.72
DDR1-228ENST00000376575 SLFN5Q08AF3 891 aa25.8■■□□□ 1.72
DDR1-228ENST00000376575 PDIA6Q15084 440 aa25.8■■□□□ 1.72
DDR1-228ENST00000376575 LRP10Q7Z4F1 713 aa25.8■■□□□ 1.72
DDR1-228ENST00000376575 MTFR1LQ9H019 292 aa25.8■■□□□ 1.72
DDR1-228ENST00000376575 E9PSI1 815 aa25.79■■□□□ 1.72
DDR1-228ENST00000376575 TSPYL6Q8N831 410 aa25.79■■□□□ 1.72
DDR1-228ENST00000376575 HNRNPUQ00839 825 aaKnown RBP eCLIP25.78■■□□□ 1.72
DDR1-228ENST00000376575 PIP4K2AP48426 406 aaPredicted RBP25.77■■□□□ 1.72
DDR1-228ENST00000376575 SGIP1Q9BQI5 828 aa25.77■■□□□ 1.72
DDR1-228ENST00000376575 USP42Q9H9J4 1324 aaKnown RBP25.77■■□□□ 1.72
DDR1-228ENST00000376575 ZBTB7AO95365 584 aa25.76■■□□□ 1.71
DDR1-228ENST00000376575 EIF2S2P20042 333 aaKnown RBP25.76■■□□□ 1.71
DDR1-228ENST00000376575 RFC4P35249 363 aa25.76■■□□□ 1.71
DDR1-228ENST00000376575 CDCA7LQ96GN5 454 aa25.76■■□□□ 1.71
DDR1-228ENST00000376575 A0A087WZG4 1122 aa25.75■■□□□ 1.71
DDR1-228ENST00000376575 NARFQ9UHQ1 456 aa25.75■■□□□ 1.71
DDR1-228ENST00000376575 LRP5O75197 1615 aa25.74■■□□□ 1.71
DDR1-228ENST00000376575 ELL2O00472 640 aaPredicted RBP25.74■■□□□ 1.71
DDR1-228ENST00000376575 GYS1P13807 737 aa25.74■■□□□ 1.71
DDR1-228ENST00000376575 PTGER2P43116 358 aa25.74■■□□□ 1.71
DDR1-228ENST00000376575 EXOSC9Q06265 439 aaKnown RBP25.74■■□□□ 1.71
DDR1-228ENST00000376575 HDGFL1Q5TGJ6 251 aa25.74■■□□□ 1.71
DDR1-228ENST00000376575 ZBED9Q6R2W3 1325 aa25.73■■□□□ 1.71
DDR1-228ENST00000376575 MSH5O43196 834 aa25.73■■□□□ 1.71
DDR1-228ENST00000376575 PROSER3Q2NL68 480 aa25.73■■□□□ 1.71
DDR1-228ENST00000376575 TWISTNBQ3B726 338 aaPredicted RBP25.73■■□□□ 1.71
DDR1-228ENST00000376575 SPON1Q9HCB6 807 aa25.73■■□□□ 1.71
DDR1-228ENST00000376575 DDX21Q9NR30 783 aaKnown RBP eCLIP25.73■■□□□ 1.71
DDR1-228ENST00000376575 VAMP4O75379 141 aa25.72■■□□□ 1.71
DDR1-228ENST00000376575 BCL2L12Q9HB09 334 aa25.72■■□□□ 1.71
DDR1-228ENST00000376575 SRP68Q9UHB9 627 aaKnown RBP25.72■■□□□ 1.71
DDR1-228ENST00000376575 RGL2O15211 777 aa25.71■■□□□ 1.71
DDR1-228ENST00000376575 CHMP4AQ9BY43 222 aa25.71■■□□□ 1.71
DDR1-228ENST00000376575 CHPF2Q9P2E5 772 aa25.71■■□□□ 1.71
DDR1-228ENST00000376575 SCN7AQ01118 1682 aa25.71■■□□□ 1.71
DDR1-228ENST00000376575 BCORQ6W2J9 1755 aa25.7■■□□□ 1.7
DDR1-228ENST00000376575 CAMTA2O94983 1202 aa25.7■■□□□ 1.7
DDR1-228ENST00000376575 NECTIN2Q92692 538 aa25.7■■□□□ 1.7
DDR1-228ENST00000376575 DBF4Q9UBU7 674 aaPredicted RBP25.7■■□□□ 1.7
DDR1-228ENST00000376575 ATF5Q9Y2D1 282 aaPredicted RBP25.7■■□□□ 1.7
DDR1-228ENST00000376575 ZPR1O75312 459 aa25.69■■□□□ 1.7
DDR1-228ENST00000376575 MYL6BP14649 208 aa25.69■■□□□ 1.7
DDR1-228ENST00000376575 USPL1Q5W0Q7 1092 aa25.69■■□□□ 1.7
DDR1-228ENST00000376575 DZIP3Q86Y13 1208 aaKnown RBP25.69■■□□□ 1.7
DDR1-228ENST00000376575 NLGN1Q8N2Q7 840 aa25.69■■□□□ 1.7
DDR1-228ENST00000376575 TBC1D2BQ9UPU7 963 aa25.69■■□□□ 1.7
DDR1-228ENST00000376575 FKBP8Q14318 412 aa25.68■■□□□ 1.7
DDR1-228ENST00000376575 CCDC30Q5VVM6 783 aa25.68■■□□□ 1.7
DDR1-228ENST00000376575 ANXA1P04083 346 aa25.67■■□□□ 1.7
DDR1-228ENST00000376575 MSL1Q68DK7 614 aa25.67■■□□□ 1.7
DDR1-228ENST00000376575 ZNF330Q9Y3S2 320 aaPredicted RBP25.67■■□□□ 1.7
DDR1-228ENST00000376575 CACNA1FO60840 1977 aa25.66■■□□□ 1.7
DDR1-228ENST00000376575 NPM2Q86SE8 214 aaKnown RBP25.66■■□□□ 1.7
DDR1-228ENST00000376575 ERVV-1B6SEH8 477 aa25.65■■□□□ 1.7
DDR1-228ENST00000376575 TM4SF1P30408 202 aa25.65■■□□□ 1.7
DDR1-228ENST00000376575 CLEC4GQ6UXB4 293 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms