RNA–Protein interactions for RNA: ENST00000370263.8

CHRNA4-201, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA4, Length 5,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-201ENST00000370263 USP48Q86UV5 1035 aa20.94■□□□□ 0.94
CHRNA4-201ENST00000370263 ZHX3Q9H4I2 956 aa20.94■□□□□ 0.94
CHRNA4-201ENST00000370263 MNAT1P51948 309 aa20.94■□□□□ 0.94
CHRNA4-201ENST00000370263 KIF6Q6ZMV9 814 aa20.94■□□□□ 0.94
CHRNA4-201ENST00000370263 DNAAF4Q8WXU2 420 aa20.94■□□□□ 0.94
CHRNA4-201ENST00000370263 FEZ1Q99689 392 aa20.94■□□□□ 0.94
CHRNA4-201ENST00000370263 YEATS4O95619 227 aa20.93■□□□□ 0.94
CHRNA4-201ENST00000370263 GUCY1B3Q02153 619 aa20.93■□□□□ 0.94
CHRNA4-201ENST00000370263 RRS1Q15050 365 aaKnown RBP20.93■□□□□ 0.94
CHRNA4-201ENST00000370263 CPLX3Q8WVH0 158 aa20.93■□□□□ 0.94
CHRNA4-201ENST00000370263 CEP126Q9P2H0 1117 aa20.93■□□□□ 0.94
CHRNA4-201ENST00000370263 TOP2BQ02880 1626 aa20.93■□□□□ 0.94
CHRNA4-201ENST00000370263 NCAPD3P42695 1498 aa20.93■□□□□ 0.94
CHRNA4-201ENST00000370263 PRG4Q92954 1404 aaPredicted RBP20.93■□□□□ 0.94
CHRNA4-201ENST00000370263 CNNM3Q8NE01 707 aa20.93■□□□□ 0.94
CHRNA4-201ENST00000370263 SLU7O95391 586 aaKnown RBP20.93■□□□□ 0.94
CHRNA4-201ENST00000370263 ZNF530Q6P9A1 599 aaPredicted RBP20.93■□□□□ 0.94
CHRNA4-201ENST00000370263 LUZP1Q86V48 1076 aa20.93■□□□□ 0.94
CHRNA4-201ENST00000370263 NUP88Q99567 741 aaPredicted RBP20.93■□□□□ 0.94
CHRNA4-201ENST00000370263 RPRD2Q5VT52 1461 aaKnown RBP20.92■□□□□ 0.94
CHRNA4-201ENST00000370263 USO1O60763 962 aaKnown RBP20.92■□□□□ 0.94
CHRNA4-201ENST00000370263 CCDC12Q8WUD4 166 aaPredicted RBP20.92■□□□□ 0.94
CHRNA4-201ENST00000370263 GNL3LQ9NVN8 582 aaKnown RBP20.92■□□□□ 0.94
CHRNA4-201ENST00000370263 BIN1O00499 593 aa20.92■□□□□ 0.94
CHRNA4-201ENST00000370263 TUBB4AP04350 444 aa20.92■□□□□ 0.94
CHRNA4-201ENST00000370263 SOGA3Q5TF21 947 aa20.92■□□□□ 0.94
CHRNA4-201ENST00000370263 OGFRQ9NZT2 677 aa20.92■□□□□ 0.94
CHRNA4-201ENST00000370263 FKBP15Q5T1M5 1219 aa20.91■□□□□ 0.94
CHRNA4-201ENST00000370263 BOLA2Q9H3K6 86 aa20.91■□□□□ 0.94
CHRNA4-201ENST00000370263 SYNJ2O15056 1496 aa20.91■□□□□ 0.94
CHRNA4-201ENST00000370263 RPGRIP1LQ68CZ1 1315 aa20.91■□□□□ 0.94
CHRNA4-201ENST00000370263 ANO6Q4KMQ2 910 aa20.91■□□□□ 0.94
CHRNA4-201ENST00000370263 CNPY2Q9Y2B0 182 aa20.91■□□□□ 0.94
CHRNA4-201ENST00000370263 TICAM2Q86XR7 235 aa20.91■□□□□ 0.94
CHRNA4-201ENST00000370263 SPG7Q9UQ90 795 aa20.91■□□□□ 0.94
CHRNA4-201ENST00000370263 EZRP15311 586 aaKnown RBP20.9■□□□□ 0.94
CHRNA4-201ENST00000370263 PTPRCP08575 1304 aa20.9■□□□□ 0.94
CHRNA4-201ENST00000370263 IKQ13123 557 aaPredicted RBP20.9■□□□□ 0.94
CHRNA4-201ENST00000370263 RTEL1-TNFRSF6BF6WH68 1400 aa20.9■□□□□ 0.94
CHRNA4-201ENST00000370263 TDO2P48775 406 aa20.9■□□□□ 0.94
CHRNA4-201ENST00000370263 IFFO1Q0D2I5 559 aa20.9■□□□□ 0.94
CHRNA4-201ENST00000370263 SRRTQ9BXP5 876 aaKnown RBP20.9■□□□□ 0.94
CHRNA4-201ENST00000370263 MCM10Q7L590 875 aa20.89■□□□□ 0.94
CHRNA4-201ENST00000370263 MYL6BP14649 208 aa20.89■□□□□ 0.93
CHRNA4-201ENST00000370263 ZSWIM4Q9H7M6 989 aa20.89■□□□□ 0.93
CHRNA4-201ENST00000370263 SEPT11Q9NVA2 429 aaKnown RBP20.89■□□□□ 0.93
CHRNA4-201ENST00000370263 GBP2P32456 591 aaPredicted RBP20.89■□□□□ 0.93
CHRNA4-201ENST00000370263 SAMD1Q6SPF0 538 aaPredicted RBP20.89■□□□□ 0.93
CHRNA4-201ENST00000370263 DNAI1Q9UI46 699 aa20.89■□□□□ 0.93
CHRNA4-201ENST00000370263 MIS18AQ9NYP9 233 aa20.88■□□□□ 0.93
CHRNA4-201ENST00000370263 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.88■□□□□ 0.93
CHRNA4-201ENST00000370263 ZSCAN16Q9H4T2 348 aaPredicted RBP20.88■□□□□ 0.93
CHRNA4-201ENST00000370263 ZFP91Q96JP5 570 aaPredicted RBP20.88■□□□□ 0.93
CHRNA4-201ENST00000370263 SDSP20132 328 aa20.88■□□□□ 0.93
CHRNA4-201ENST00000370263 AQRO60306 1485 aaKnown RBP eCLIP20.88■□□□□ 0.93
CHRNA4-201ENST00000370263 ANAPC15P60006 121 aa20.88■□□□□ 0.93
CHRNA4-201ENST00000370263 CCDC113Q9H0I3 377 aa20.88■□□□□ 0.93
CHRNA4-201ENST00000370263 IL16Q14005 1332 aa20.87■□□□□ 0.93
CHRNA4-201ENST00000370263 TXNDC2Q86VQ3 553 aa20.87■□□□□ 0.93
CHRNA4-201ENST00000370263 EVI5LQ96CN4 794 aa20.87■□□□□ 0.93
CHRNA4-201ENST00000370263 BTBD11A6QL63 1104 aa20.87■□□□□ 0.93
CHRNA4-201ENST00000370263 F6X3S4 739 aa20.87■□□□□ 0.93
CHRNA4-201ENST00000370263 NAA15Q9BXJ9 866 aaKnown RBP20.87■□□□□ 0.93
CHRNA4-201ENST00000370263 PHAXQ9H814 394 aaKnown RBP20.87■□□□□ 0.93
CHRNA4-201ENST00000370263 GNAT3A8MTJ3 354 aa20.87■□□□□ 0.93
CHRNA4-201ENST00000370263 SSBP05455 408 aaKnown RBP eCLIP20.87■□□□□ 0.93
CHRNA4-201ENST00000370263 RSPH14Q9UHP6 348 aa20.87■□□□□ 0.93
CHRNA4-201ENST00000370263 CCDC175P0C221 793 aa20.86■□□□□ 0.93
CHRNA4-201ENST00000370263 CACNA2D4Q7Z3S7 1137 aa20.86■□□□□ 0.93
CHRNA4-201ENST00000370263 RBM42Q9BTD8 480 aaKnown RBP20.86■□□□□ 0.93
CHRNA4-201ENST00000370263 BCCIPQ9P287 314 aaKnown RBP eCLIP20.86■□□□□ 0.93
CHRNA4-201ENST00000370263 KIF20AO95235 890 aa20.85■□□□□ 0.93
CHRNA4-201ENST00000370263 TERF1P54274 439 aa20.85■□□□□ 0.93
CHRNA4-201ENST00000370263 SMC1AQ14683 1233 aaKnown RBP20.85■□□□□ 0.93
CHRNA4-201ENST00000370263 GOLGA6L10A0A0M3HER8 536 aa20.85■□□□□ 0.93
CHRNA4-201ENST00000370263 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.85■□□□□ 0.93
CHRNA4-201ENST00000370263 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.85■□□□□ 0.93
CHRNA4-201ENST00000370263 V9GYY5 206 aaPredicted RBP20.85■□□□□ 0.93
CHRNA4-201ENST00000370263 IGSF3O75054 1194 aa20.85■□□□□ 0.93
CHRNA4-201ENST00000370263 ARHGAP45Q92619 1136 aa20.85■□□□□ 0.93
CHRNA4-201ENST00000370263 ALS2CR12Q96Q35 445 aa20.85■□□□□ 0.93
CHRNA4-201ENST00000370263 ECHDC1Q9NTX5 307 aa20.85■□□□□ 0.93
CHRNA4-201ENST00000370263 CCDC141Q6ZP82 1450 aa20.84■□□□□ 0.93
CHRNA4-201ENST00000370263 PTPN23Q9H3S7 1636 aa20.84■□□□□ 0.93
CHRNA4-201ENST00000370263 CCDC196A0A1B0GTZ2 297 aa20.84■□□□□ 0.93
CHRNA4-201ENST00000370263 TATP17735 454 aaPredicted RBP20.84■□□□□ 0.93
CHRNA4-201ENST00000370263 CCT2P78371 535 aaKnown RBP20.84■□□□□ 0.93
CHRNA4-201ENST00000370263 MCM6Q14566 821 aa20.84■□□□□ 0.93
CHRNA4-201ENST00000370263 AIDAQ96BJ3 306 aa20.84■□□□□ 0.93
CHRNA4-201ENST00000370263 CCDC178Q5BJE1 867 aa20.84■□□□□ 0.93
CHRNA4-201ENST00000370263 FAM177BA6PVY3 158 aa20.83■□□□□ 0.93
CHRNA4-201ENST00000370263 UBASH3AP57075 661 aa20.83■□□□□ 0.93
CHRNA4-201ENST00000370263 F13A1P00488 732 aa20.83■□□□□ 0.93
CHRNA4-201ENST00000370263 SPECC1Q5M775 1068 aa20.83■□□□□ 0.93
CHRNA4-201ENST00000370263 DACT1Q9NYF0 836 aa20.83■□□□□ 0.93
CHRNA4-201ENST00000370263 GCOM1H8Y6P7 765 aaPredicted RBP20.83■□□□□ 0.92
CHRNA4-201ENST00000370263 SEC24BO95487 1268 aa20.83■□□□□ 0.92
CHRNA4-201ENST00000370263 MYZAPP0CAP1 466 aa20.83■□□□□ 0.92
CHRNA4-201ENST00000370263 LIG1P18858 919 aa20.83■□□□□ 0.92
CHRNA4-201ENST00000370263 PCF11O94913 1555 aaKnown RBP20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms