RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 TTC5Q8N0Z6 440 aa26.56■■□□□ 1.84
SHISA4-201ENST00000362011 SLC16A10Q8TF71 515 aa26.56■■□□□ 1.84
SHISA4-201ENST00000362011 KCPQ6ZWJ8 1503 aa26.55■■□□□ 1.84
SHISA4-201ENST00000362011 PRIM1P49642 420 aaKnown RBP26.54■■□□□ 1.84
SHISA4-201ENST00000362011 RARSP54136 660 aaKnown RBP26.54■■□□□ 1.84
SHISA4-201ENST00000362011 SYTL4Q96C24 671 aaPredicted RBP26.54■■□□□ 1.84
SHISA4-201ENST00000362011 PIGBQ92521 554 aa26.53■■□□□ 1.84
SHISA4-201ENST00000362011 CHD4Q14839 1912 aa26.52■■□□□ 1.84
SHISA4-201ENST00000362011 HEG1Q9ULI3 1381 aa26.52■■□□□ 1.84
SHISA4-201ENST00000362011 HOXB7P09629 217 aa26.51■■□□□ 1.83
SHISA4-201ENST00000362011 ALDH1L2Q3SY69 923 aa26.51■■□□□ 1.83
SHISA4-201ENST00000362011 PNPLA7Q6ZV29 1317 aa26.51■■□□□ 1.83
SHISA4-201ENST00000362011 FMNL2Q96PY5 1086 aa26.5■■□□□ 1.83
SHISA4-201ENST00000362011 LY75O60449 1722 aa26.49■■□□□ 1.83
SHISA4-201ENST00000362011 RNF123Q5XPI4 1314 aa26.49■■□□□ 1.83
SHISA4-201ENST00000362011 BCAR3O75815 825 aa26.48■■□□□ 1.83
SHISA4-201ENST00000362011 SMC4Q9NTJ3 1288 aa26.48■■□□□ 1.83
SHISA4-201ENST00000362011 TJP1Q07157 1748 aa26.48■■□□□ 1.83
SHISA4-201ENST00000362011 CICQ96RK0 1608 aaPredicted RBP26.48■■□□□ 1.83
SHISA4-201ENST00000362011 SSH1Q8WYL5 1049 aa26.47■■□□□ 1.83
SHISA4-201ENST00000362011 ZNF496Q96IT1 587 aaPredicted RBP26.47■■□□□ 1.83
SHISA4-201ENST00000362011 ZNF831Q5JPB2 1677 aa26.47■■□□□ 1.83
SHISA4-201ENST00000362011 GIGYF1O75420 1035 aaPredicted RBP26.46■■□□□ 1.83
SHISA4-201ENST00000362011 RRP1P56182 461 aaKnown RBP26.46■■□□□ 1.83
SHISA4-201ENST00000362011 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.46■■□□□ 1.83
SHISA4-201ENST00000362011 BCL2L13Q9BXK5 485 aa26.46■■□□□ 1.83
SHISA4-201ENST00000362011 CHMP4AQ9BY43 222 aa26.46■■□□□ 1.83
SHISA4-201ENST00000362011 ATG3Q9NT62 314 aa26.46■■□□□ 1.83
SHISA4-201ENST00000362011 ASAP1Q9ULH1 1129 aa26.46■■□□□ 1.83
SHISA4-201ENST00000362011 TUBGCP6Q96RT7 1819 aa26.46■■□□□ 1.83
SHISA4-201ENST00000362011 CCDC30Q5VVM6 783 aa26.44■■□□□ 1.82
SHISA4-201ENST00000362011 SNRPA1P09661 255 aaKnown RBP26.43■■□□□ 1.82
SHISA4-201ENST00000362011 HDGFL1Q5TGJ6 251 aa26.43■■□□□ 1.82
SHISA4-201ENST00000362011 KIF16BQ96L93 1317 aa26.42■■□□□ 1.82
SHISA4-201ENST00000362011 COL5A3P25940 1745 aaPredicted RBP26.42■■□□□ 1.82
SHISA4-201ENST00000362011 PTCD1O75127 700 aaKnown RBP26.41■■□□□ 1.82
SHISA4-201ENST00000362011 POLD1P28340 1107 aa26.41■■□□□ 1.82
SHISA4-201ENST00000362011 BRPF1P55201 1214 aaPredicted RBP26.41■■□□□ 1.82
SHISA4-201ENST00000362011 KCNQ4P56696 695 aa26.41■■□□□ 1.82
SHISA4-201ENST00000362011 MRPL50Q8N5N7 158 aaKnown RBP26.41■■□□□ 1.82
SHISA4-201ENST00000362011 STK31Q9BXU1 1019 aa26.41■■□□□ 1.82
SHISA4-201ENST00000362011 TFCP2L1Q9NZI6 479 aa26.41■■□□□ 1.82
SHISA4-201ENST00000362011 TCERG1O14776 1098 aaKnown RBP26.4■■□□□ 1.82
SHISA4-201ENST00000362011 NEFLP07196 543 aa26.4■■□□□ 1.82
SHISA4-201ENST00000362011 EIF2S2P20042 333 aaKnown RBP26.4■■□□□ 1.82
SHISA4-201ENST00000362011 SMARCC1Q92922 1105 aaPredicted RBP26.4■■□□□ 1.82
SHISA4-201ENST00000362011 TAF1LQ8IZX4 1826 aa26.4■■□□□ 1.82
SHISA4-201ENST00000362011 PRAMEF22A3QJZ6 481 aa26.39■■□□□ 1.82
SHISA4-201ENST00000362011 CANXP27824 592 aaKnown RBP26.39■■□□□ 1.82
SHISA4-201ENST00000362011 NECTIN2Q92692 538 aa26.39■■□□□ 1.82
SHISA4-201ENST00000362011 RBM42Q9BTD8 480 aaKnown RBP26.39■■□□□ 1.82
SHISA4-201ENST00000362011 GPR162Q16538 588 aa26.39■■□□□ 1.81
SHISA4-201ENST00000362011 VSIG10Q8N0Z9 540 aa26.39■■□□□ 1.81
SHISA4-201ENST00000362011 PALLDQ8WX93 1383 aa26.38■■□□□ 1.81
SHISA4-201ENST00000362011 PLIN1O60240 522 aa26.38■■□□□ 1.81
SHISA4-201ENST00000362011 FRAT1Q92837 279 aaPredicted RBP26.38■■□□□ 1.81
SHISA4-201ENST00000362011 N4BP2Q86UW6 1770 aaPredicted RBP26.37■■□□□ 1.81
SHISA4-201ENST00000362011 C1QTNF8P60827 252 aa26.37■■□□□ 1.81
SHISA4-201ENST00000362011 CCNL1Q9UK58 526 aaPredicted RBP26.37■■□□□ 1.81
SHISA4-201ENST00000362011 TEX13AQ9BXU3 409 aaPredicted RBP26.36■■□□□ 1.81
SHISA4-201ENST00000362011 IPO8O15397 1037 aaKnown RBP26.35■■□□□ 1.81
SHISA4-201ENST00000362011 SLC4A2P04920 1241 aa26.35■■□□□ 1.81
SHISA4-201ENST00000362011 ZKSCAN2Q63HK3 967 aa26.35■■□□□ 1.81
SHISA4-201ENST00000362011 NLGN2Q8NFZ4 835 aa26.35■■□□□ 1.81
SHISA4-201ENST00000362011 NOB1Q9ULX3 412 aaKnown RBP26.35■■□□□ 1.81
SHISA4-201ENST00000362011 USP16Q9Y5T5 823 aa26.35■■□□□ 1.81
SHISA4-201ENST00000362011 COL23A1Q86Y22 540 aaPredicted RBP26.34■■□□□ 1.81
SHISA4-201ENST00000362011 GOLGB1Q14789 3259 aaKnown RBP26.33■■□□□ 1.81
SHISA4-201ENST00000362011 CHPF2Q9P2E5 772 aa26.33■■□□□ 1.81
SHISA4-201ENST00000362011 DBF4Q9UBU7 674 aaPredicted RBP26.33■■□□□ 1.81
SHISA4-201ENST00000362011 ERBB4Q15303 1308 aa26.32■■□□□ 1.8
SHISA4-201ENST00000362011 LOC102724428A0A0B4J2F2 783 aa26.31■■□□□ 1.8
SHISA4-201ENST00000362011 SIK1P57059 783 aa26.31■■□□□ 1.8
SHISA4-201ENST00000362011 MYH14Q7Z406 1995 aaKnown RBP26.31■■□□□ 1.8
SHISA4-201ENST00000362011 MS4A1P11836 297 aa26.3■■□□□ 1.8
SHISA4-201ENST00000362011 IRX6P78412 446 aaPredicted RBP26.3■■□□□ 1.8
SHISA4-201ENST00000362011 DNAJC10Q8IXB1 793 aa26.3■■□□□ 1.8
SHISA4-201ENST00000362011 KLHL34Q8N239 644 aa26.3■■□□□ 1.8
SHISA4-201ENST00000362011 ARHGAP45Q92619 1136 aa26.3■■□□□ 1.8
SHISA4-201ENST00000362011 SLC4A9Q96Q91 983 aa26.3■■□□□ 1.8
SHISA4-201ENST00000362011 DDX21Q9NR30 783 aaKnown RBP eCLIP26.3■■□□□ 1.8
SHISA4-201ENST00000362011 PTPRCP08575 1304 aa26.3■■□□□ 1.8
SHISA4-201ENST00000362011 PDE3AQ14432 1141 aa26.29■■□□□ 1.8
SHISA4-201ENST00000362011 ATF7IPQ6VMQ6 1270 aa26.29■■□□□ 1.8
SHISA4-201ENST00000362011 ARFGEF2Q9Y6D5 1785 aa26.29■■□□□ 1.8
SHISA4-201ENST00000362011 G2E3Q7L622 706 aa26.28■■□□□ 1.8
SHISA4-201ENST00000362011 API5Q9BZZ5 524 aaKnown RBP26.28■■□□□ 1.8
SHISA4-201ENST00000362011 HYPKQ9NX55 129 aa26.28■■□□□ 1.8
SHISA4-201ENST00000362011 STARD3NLO95772 234 aa26.27■■□□□ 1.8
SHISA4-201ENST00000362011 HMGB2P26583 209 aaKnown RBP26.27■■□□□ 1.8
SHISA4-201ENST00000362011 ATP6V1AP38606 617 aa26.27■■□□□ 1.8
SHISA4-201ENST00000362011 ANXA1P04083 346 aa26.26■■□□□ 1.79
SHISA4-201ENST00000362011 TRIM27P14373 513 aa26.26■■□□□ 1.79
SHISA4-201ENST00000362011 YBX3P16989 372 aaKnown RBP eCLIP26.26■■□□□ 1.79
SHISA4-201ENST00000362011 FLIIQ13045 1269 aa26.26■■□□□ 1.79
SHISA4-201ENST00000362011 FKBP8Q14318 412 aa26.26■■□□□ 1.79
SHISA4-201ENST00000362011 PDIA6Q15084 440 aa26.26■■□□□ 1.79
SHISA4-201ENST00000362011 GRIN3BO60391 1043 aa26.25■■□□□ 1.79
SHISA4-201ENST00000362011 PROSER3Q2NL68 480 aa26.25■■□□□ 1.79
SHISA4-201ENST00000362011 C20orf194Q5TEA3 1177 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms