RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 LMTK2Q8IWU2 1503 aa17.04■□□□□ 0.32
RLIM-202ENST00000349225 CPA1P15085 419 aa17.04■□□□□ 0.32
RLIM-202ENST00000349225 CDK11BP21127 795 aaKnown RBP17.04■□□□□ 0.32
RLIM-202ENST00000349225 AK2P54819 239 aa17.04■□□□□ 0.32
RLIM-202ENST00000349225 SLC20A2Q08357 652 aa17.04■□□□□ 0.32
RLIM-202ENST00000349225 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.04■□□□□ 0.32
RLIM-202ENST00000349225 ZFYVE9O95405 1425 aa17.03■□□□□ 0.32
RLIM-202ENST00000349225 ARID5BQ14865 1188 aa17.03■□□□□ 0.32
RLIM-202ENST00000349225 EMILIN1Q9Y6C2 1016 aa17.03■□□□□ 0.32
RLIM-202ENST00000349225 NPATQ14207 1427 aa17.03■□□□□ 0.32
RLIM-202ENST00000349225 CCDC192P0DO97 292 aa17.03■□□□□ 0.32
RLIM-202ENST00000349225 LIG1P18858 919 aa17.03■□□□□ 0.32
RLIM-202ENST00000349225 RASEFQ8IZ41 740 aa17.03■□□□□ 0.32
RLIM-202ENST00000349225 CBX8Q9HC52 389 aa17.03■□□□□ 0.32
RLIM-202ENST00000349225 IL13P35225 146 aa17.02■□□□□ 0.32
RLIM-202ENST00000349225 TRERF1Q96PN7 1200 aa17.02■□□□□ 0.32
RLIM-202ENST00000349225 STK26Q9P289 416 aa17.02■□□□□ 0.32
RLIM-202ENST00000349225 MTMR6Q9Y217 621 aa17.02■□□□□ 0.32
RLIM-202ENST00000349225 CHMP3Q9Y3E7 222 aa17.02■□□□□ 0.32
RLIM-202ENST00000349225 PAXBP1Q9Y5B6 917 aa17.02■□□□□ 0.32
RLIM-202ENST00000349225 PREX1Q8TCU6 1659 aa17.02■□□□□ 0.32
RLIM-202ENST00000349225 SSH2Q76I76 1423 aa17.02■□□□□ 0.32
RLIM-202ENST00000349225 TYRO3Q06418 890 aa17.02■□□□□ 0.32
RLIM-202ENST00000349225 ZNF397Q8NF99 534 aaPredicted RBP17.02■□□□□ 0.32
RLIM-202ENST00000349225 ZNF592Q92610 1267 aa17.02■□□□□ 0.32
RLIM-202ENST00000349225 CCDC66A2RUB6 948 aa17.02■□□□□ 0.31
RLIM-202ENST00000349225 TRIM6-TRIM34B2RNG4 842 aa17.02■□□□□ 0.31
RLIM-202ENST00000349225 ZNF75DP51815 510 aa17.01■□□□□ 0.31
RLIM-202ENST00000349225 ST3GAL1Q11201 340 aa17.01■□□□□ 0.31
RLIM-202ENST00000349225 ELF2Q15723 593 aa17.01■□□□□ 0.31
RLIM-202ENST00000349225 MINK1Q8N4C8 1332 aaPredicted RBP17.01■□□□□ 0.31
RLIM-202ENST00000349225 SNX14Q9Y5W7 946 aa17.01■□□□□ 0.31
RLIM-202ENST00000349225 CEP135Q66GS9 1140 aa17.01■□□□□ 0.31
RLIM-202ENST00000349225 CKAP2LQ8IYA6 745 aa17.01■□□□□ 0.31
RLIM-202ENST00000349225 NEO1Q92859 1461 aa17.01■□□□□ 0.31
RLIM-202ENST00000349225 F6X3S4 739 aa17■□□□□ 0.31
RLIM-202ENST00000349225 TPD52L1Q16890 204 aaPredicted RBP17■□□□□ 0.31
RLIM-202ENST00000349225 TTC6Q86TZ1 520 aa17■□□□□ 0.31
RLIM-202ENST00000349225 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17■□□□□ 0.31
RLIM-202ENST00000349225 RTF1Q92541 710 aaKnown RBP17■□□□□ 0.31
RLIM-202ENST00000349225 ANO6Q4KMQ2 910 aa17■□□□□ 0.31
RLIM-202ENST00000349225 TERF2IPQ9NYB0 399 aa17■□□□□ 0.31
RLIM-202ENST00000349225 FAM173BQ6P4H8 233 aa17■□□□□ 0.31
RLIM-202ENST00000349225 KIF1BPQ96EK5 621 aa17■□□□□ 0.31
RLIM-202ENST00000349225 CDK12Q9NYV4 1490 aaPredicted RBP16.99■□□□□ 0.31
RLIM-202ENST00000349225 RAD50Q92878 1312 aa16.99■□□□□ 0.31
RLIM-202ENST00000349225 CPSF1Q10570 1443 aaKnown RBP16.99■□□□□ 0.31
RLIM-202ENST00000349225 PNMA6EA0A0J9YXQ4 647 aa16.99■□□□□ 0.31
RLIM-202ENST00000349225 G2E3Q7L622 706 aa16.99■□□□□ 0.31
RLIM-202ENST00000349225 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.99■□□□□ 0.31
RLIM-202ENST00000349225 NYAP1Q6ZVC0 841 aa16.98■□□□□ 0.31
RLIM-202ENST00000349225 LRRN4CLQ8ND94 238 aa16.98■□□□□ 0.31
RLIM-202ENST00000349225 MLH3Q9UHC1 1453 aa16.98■□□□□ 0.31
RLIM-202ENST00000349225 HECW2Q9P2P5 1572 aa16.98■□□□□ 0.31
RLIM-202ENST00000349225 PTPRMP28827 1452 aa16.98■□□□□ 0.31
RLIM-202ENST00000349225 GJB2P29033 226 aa16.98■□□□□ 0.31
RLIM-202ENST00000349225 DRC7Q8IY82 874 aa16.98■□□□□ 0.31
RLIM-202ENST00000349225 DNAJC2Q99543 621 aaKnown RBP16.98■□□□□ 0.31
RLIM-202ENST00000349225 CABP1Q9NZU7 370 aa16.98■□□□□ 0.31
RLIM-202ENST00000349225 NEXMIFQ5QGS0 1516 aa16.98■□□□□ 0.31
RLIM-202ENST00000349225 HNRNPH2P55795 449 aaKnown RBP16.98■□□□□ 0.31
RLIM-202ENST00000349225 CHMP4AQ9BY43 222 aa16.98■□□□□ 0.31
RLIM-202ENST00000349225 YTHDC2Q9H6S0 1430 aaKnown RBP16.98■□□□□ 0.31
RLIM-202ENST00000349225 MAP4K4O95819 1239 aaPredicted RBP16.97■□□□□ 0.31
RLIM-202ENST00000349225 CYP2C19P33261 490 aa16.97■□□□□ 0.31
RLIM-202ENST00000349225 NFATC2IPQ8NCF5 419 aa16.97■□□□□ 0.31
RLIM-202ENST00000349225 TRIM5Q9C035 493 aa16.97■□□□□ 0.31
RLIM-202ENST00000349225 CLTCQ00610 1675 aaKnown RBP16.97■□□□□ 0.31
RLIM-202ENST00000349225 SMC3Q9UQE7 1217 aa16.97■□□□□ 0.31
RLIM-202ENST00000349225 MAP3K11Q16584 847 aa16.97■□□□□ 0.31
RLIM-202ENST00000349225 CCDC83Q8IWF9 413 aa16.97■□□□□ 0.31
RLIM-202ENST00000349225 KLHL34Q8N239 644 aa16.96■□□□□ 0.31
RLIM-202ENST00000349225 TRIM34Q9BYJ4 488 aa16.96■□□□□ 0.31
RLIM-202ENST00000349225 LRRCC1Q9C099 1032 aa16.96■□□□□ 0.31
RLIM-202ENST00000349225 LIMCH1Q9UPQ0 1083 aa16.96■□□□□ 0.31
RLIM-202ENST00000349225 COL9A3Q14050 684 aaPredicted RBP16.96■□□□□ 0.31
RLIM-202ENST00000349225 CERS3Q8IU89 383 aa16.95■□□□□ 0.3
RLIM-202ENST00000349225 NUP62CLQ9H1M0 184 aa16.95■□□□□ 0.3
RLIM-202ENST00000349225 CALCOCO1Q9P1Z2 691 aa16.95■□□□□ 0.3
RLIM-202ENST00000349225 CLIP2Q9UDT6 1046 aa16.95■□□□□ 0.3
RLIM-202ENST00000349225 STAP2Q9UGK3 403 aa16.95■□□□□ 0.3
RLIM-202ENST00000349225 SIGLEC1Q9BZZ2 1709 aa16.95■□□□□ 0.3
RLIM-202ENST00000349225 NPHP1O15259 732 aa16.95■□□□□ 0.3
RLIM-202ENST00000349225 HMMRO75330 724 aa16.95■□□□□ 0.3
RLIM-202ENST00000349225 SLC4A10Q6U841 1118 aa16.95■□□□□ 0.3
RLIM-202ENST00000349225 LRRC8AQ8IWT6 810 aa16.95■□□□□ 0.3
RLIM-202ENST00000349225 HYPKQ9NX55 129 aa16.95■□□□□ 0.3
RLIM-202ENST00000349225 ZRANB1Q9UGI0 708 aa16.95■□□□□ 0.3
RLIM-202ENST00000349225 FEZ2Q9UHY8 353 aaPredicted RBP16.95■□□□□ 0.3
RLIM-202ENST00000349225 FHOD1Q9Y613 1164 aa16.95■□□□□ 0.3
RLIM-202ENST00000349225 TDRD7Q8NHU6 1098 aaKnown RBP16.95■□□□□ 0.3
RLIM-202ENST00000349225 GTF3C6Q969F1 213 aa16.95■□□□□ 0.3
RLIM-202ENST00000349225 LSG1Q9H089 658 aaKnown RBP16.95■□□□□ 0.3
RLIM-202ENST00000349225 DACT1Q9NYF0 836 aa16.95■□□□□ 0.3
RLIM-202ENST00000349225 POGZQ7Z3K3 1410 aa16.95■□□□□ 0.3
RLIM-202ENST00000349225 SLC4A2P04920 1241 aa16.94■□□□□ 0.3
RLIM-202ENST00000349225 PTPRCP08575 1304 aa16.94■□□□□ 0.3
RLIM-202ENST00000349225 RPGRIP1LQ68CZ1 1315 aa16.94■□□□□ 0.3
RLIM-202ENST00000349225 PRAM1Q96QH2 718 aa16.94■□□□□ 0.3
RLIM-202ENST00000349225 DNAJC25Q9H1X3 360 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms