RNA–Protein interactions for RNA: ENST00000336083.7

RAB6A-202, Transcript of RAB6A, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB6A, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-202ENST00000336083 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.86□□□□□ -0.03
RAB6A-202ENST00000336083 ATP6V1DQ9Y5K8 247 aa14.86□□□□□ -0.03
RAB6A-202ENST00000336083 DLG5Q8TDM6 1919 aa14.86□□□□□ -0.03
RAB6A-202ENST00000336083 CKAP2LQ8IYA6 745 aa14.86□□□□□ -0.03
RAB6A-202ENST00000336083 SNX14Q9Y5W7 946 aa14.86□□□□□ -0.03
RAB6A-202ENST00000336083 GJB2P29033 226 aa14.86□□□□□ -0.03
RAB6A-202ENST00000336083 FERMT3Q86UX7 667 aa14.86□□□□□ -0.03
RAB6A-202ENST00000336083 NRBP1Q9UHY1 535 aa14.86□□□□□ -0.03
RAB6A-202ENST00000336083 TSPYL4Q9UJ04 414 aa14.86□□□□□ -0.03
RAB6A-202ENST00000336083 LIMCH1Q9UPQ0 1083 aa14.86□□□□□ -0.03
RAB6A-202ENST00000336083 SPG7Q9UQ90 795 aa14.86□□□□□ -0.03
RAB6A-202ENST00000336083 TPM3P06753 285 aa14.85□□□□□ -0.03
RAB6A-202ENST00000336083 BBXQ8WY36 941 aaPredicted RBP14.85□□□□□ -0.03
RAB6A-202ENST00000336083 LRRFIP2Q9Y608 721 aaKnown RBP14.85□□□□□ -0.03
RAB6A-202ENST00000336083 KIF20BQ96Q89 1820 aa14.85□□□□□ -0.03
RAB6A-202ENST00000336083 CTIFO43310 598 aaKnown RBP14.85□□□□□ -0.03
RAB6A-202ENST00000336083 CASTP20810 708 aaKnown RBP14.85□□□□□ -0.03
RAB6A-202ENST00000336083 FAM173BQ6P4H8 233 aa14.85□□□□□ -0.03
RAB6A-202ENST00000336083 CPSF1Q10570 1443 aaKnown RBP14.85□□□□□ -0.03
RAB6A-202ENST00000336083 FOXO3O43524 673 aa14.84□□□□□ -0.03
RAB6A-202ENST00000336083 CWC27Q6UX04 472 aaKnown RBP14.84□□□□□ -0.03
RAB6A-202ENST00000336083 KIAA0232Q92628 1395 aa14.84□□□□□ -0.03
RAB6A-202ENST00000336083 TNNT1P13805 278 aa14.84□□□□□ -0.03
RAB6A-202ENST00000336083 FAM69CQ0P6D2 419 aa14.84□□□□□ -0.03
RAB6A-202ENST00000336083 EIF4A2Q14240 407 aaKnown RBP14.84□□□□□ -0.03
RAB6A-202ENST00000336083 TRIM5Q9C035 493 aa14.84□□□□□ -0.03
RAB6A-202ENST00000336083 RAPGEF3O95398 923 aa14.83□□□□□ -0.04
RAB6A-202ENST00000336083 FGD1P98174 961 aa14.83□□□□□ -0.04
RAB6A-202ENST00000336083 STK31Q9BXU1 1019 aa14.83□□□□□ -0.04
RAB6A-202ENST00000336083 OGFRQ9NZT2 677 aa14.83□□□□□ -0.04
RAB6A-202ENST00000336083 FAM200AQ8TCP9 573 aa14.83□□□□□ -0.04
RAB6A-202ENST00000336083 FEZ1Q99689 392 aa14.83□□□□□ -0.04
RAB6A-202ENST00000336083 SSH2Q76I76 1423 aa14.82□□□□□ -0.04
RAB6A-202ENST00000336083 ATP8B2P98198 1209 aa14.82□□□□□ -0.04
RAB6A-202ENST00000336083 NECAB1Q8N987 351 aa14.82□□□□□ -0.04
RAB6A-202ENST00000336083 TTC14Q96N46 770 aa14.82□□□□□ -0.04
RAB6A-202ENST00000336083 DNAJC5Q9H3Z4 198 aa14.82□□□□□ -0.04
RAB6A-202ENST00000336083 MTMR6Q9Y217 621 aa14.82□□□□□ -0.04
RAB6A-202ENST00000336083 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.82□□□□□ -0.04
RAB6A-202ENST00000336083 ZBTB22O15209 634 aa14.82□□□□□ -0.04
RAB6A-202ENST00000336083 NUP62CLQ9H1M0 184 aa14.82□□□□□ -0.04
RAB6A-202ENST00000336083 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.82□□□□□ -0.04
RAB6A-202ENST00000336083 V9GYY5 206 aaPredicted RBP14.82□□□□□ -0.04
RAB6A-202ENST00000336083 RAD50Q92878 1312 aa14.82□□□□□ -0.04
RAB6A-202ENST00000336083 CDK12Q9NYV4 1490 aaPredicted RBP14.82□□□□□ -0.04
RAB6A-202ENST00000336083 SURF6O75683 361 aaKnown RBP14.81□□□□□ -0.04
RAB6A-202ENST00000336083 GNAI3P08754 354 aa14.81□□□□□ -0.04
RAB6A-202ENST00000336083 LIG1P18858 919 aa14.81□□□□□ -0.04
RAB6A-202ENST00000336083 TYRO3Q06418 890 aa14.81□□□□□ -0.04
RAB6A-202ENST00000336083 MAP3K11Q16584 847 aa14.81□□□□□ -0.04
RAB6A-202ENST00000336083 TPD52L1Q16890 204 aaPredicted RBP14.81□□□□□ -0.04
RAB6A-202ENST00000336083 CCDC112Q8NEF3 446 aa14.81□□□□□ -0.04
RAB6A-202ENST00000336083 SIGLEC1Q9BZZ2 1709 aa14.81□□□□□ -0.04
RAB6A-202ENST00000336083 SLC52A1Q9NWF4 448 aa14.81□□□□□ -0.04
RAB6A-202ENST00000336083 SGSM2O43147 1006 aa14.81□□□□□ -0.04
RAB6A-202ENST00000336083 ANO6Q4KMQ2 910 aa14.81□□□□□ -0.04
RAB6A-202ENST00000336083 RTF1Q92541 710 aaKnown RBP14.81□□□□□ -0.04
RAB6A-202ENST00000336083 JAKMIP1Q96N16 626 aaKnown RBP14.81□□□□□ -0.04
RAB6A-202ENST00000336083 STAP2Q9UGK3 403 aa14.81□□□□□ -0.04
RAB6A-202ENST00000336083 CTNNA3Q9UI47 895 aa14.81□□□□□ -0.04
RAB6A-202ENST00000336083 MRVI1Q9Y6F6 885 aa14.81□□□□□ -0.04
RAB6A-202ENST00000336083 FLIIQ13045 1269 aa14.8□□□□□ -0.04
RAB6A-202ENST00000336083 FBXO31Q5XUX0 539 aaPredicted RBP14.8□□□□□ -0.04
RAB6A-202ENST00000336083 TTC6Q86TZ1 520 aa14.8□□□□□ -0.04
RAB6A-202ENST00000336083 GOLGA6L4A6NEF3 574 aa14.8□□□□□ -0.04
RAB6A-202ENST00000336083 FRMPD1Q5SYB0 1578 aa14.8□□□□□ -0.04
RAB6A-202ENST00000336083 HECW2Q9P2P5 1572 aa14.8□□□□□ -0.04
RAB6A-202ENST00000336083 SMTNL1A8MU46 457 aa14.79□□□□□ -0.04
RAB6A-202ENST00000336083 HSP90AB2PQ58FF8 381 aa14.79□□□□□ -0.04
RAB6A-202ENST00000336083 TNMDQ9H2S6 317 aa14.79□□□□□ -0.04
RAB6A-202ENST00000336083 CBX8Q9HC52 389 aa14.79□□□□□ -0.04
RAB6A-202ENST00000336083 ADCK5Q3MIX3 580 aa14.79□□□□□ -0.04
RAB6A-202ENST00000336083 LSG1Q9H089 658 aaKnown RBP14.79□□□□□ -0.04
RAB6A-202ENST00000336083 PDRG1Q9NUG6 133 aa14.79□□□□□ -0.04
RAB6A-202ENST00000336083 DACT1Q9NYF0 836 aa14.79□□□□□ -0.04
RAB6A-202ENST00000336083 TFIP11Q9UBB9 837 aaKnown RBP14.79□□□□□ -0.04
RAB6A-202ENST00000336083 ZSCAN25Q6NSZ9 544 aa14.79□□□□□ -0.04
RAB6A-202ENST00000336083 PRPF40BQ6NWY9 871 aaKnown RBP14.79□□□□□ -0.04
RAB6A-202ENST00000336083 NUTM2FA1L443 756 aa14.78□□□□□ -0.04
RAB6A-202ENST00000336083 UBTFL1P0CB47 393 aaPredicted RBP14.78□□□□□ -0.04
RAB6A-202ENST00000336083 LARP1BQ659C4 914 aaKnown RBP14.78□□□□□ -0.04
RAB6A-202ENST00000336083 HYPKQ9NX55 129 aa14.78□□□□□ -0.04
RAB6A-202ENST00000336083 NPHP1O15259 732 aa14.78□□□□□ -0.04
RAB6A-202ENST00000336083 PIK3C2BO00750 1634 aa14.78□□□□□ -0.04
RAB6A-202ENST00000336083 KRT85P78386 507 aa14.77□□□□□ -0.04
RAB6A-202ENST00000336083 EDC4Q6P2E9 1401 aaKnown RBP14.77□□□□□ -0.04
RAB6A-202ENST00000336083 CDC37L1Q7L3B6 337 aa14.77□□□□□ -0.05
RAB6A-202ENST00000336083 CNTROBQ8N137 903 aa14.77□□□□□ -0.05
RAB6A-202ENST00000336083 NUDT16Q96DE0 195 aaKnown RBP14.77□□□□□ -0.05
RAB6A-202ENST00000336083 GTF2E1P29083 439 aaPredicted RBP14.77□□□□□ -0.05
RAB6A-202ENST00000336083 CACTINQ8WUQ7 758 aaKnown RBP14.77□□□□□ -0.05
RAB6A-202ENST00000336083 TCEANC2Q96MN5 208 aa14.77□□□□□ -0.05
RAB6A-202ENST00000336083 CLIP2Q9UDT6 1046 aa14.77□□□□□ -0.05
RAB6A-202ENST00000336083 DDX41Q9UJV9 622 aaKnown RBP14.77□□□□□ -0.05
RAB6A-202ENST00000336083 ATP7BP35670 1465 aa14.76□□□□□ -0.05
RAB6A-202ENST00000336083 ERICH4A6NGS2 130 aa14.76□□□□□ -0.05
RAB6A-202ENST00000336083 WASLO00401 505 aaPredicted RBP14.76□□□□□ -0.05
RAB6A-202ENST00000336083 ZNF75DP51815 510 aa14.76□□□□□ -0.05
RAB6A-202ENST00000336083 ME3Q16798 604 aa14.76□□□□□ -0.05
RAB6A-202ENST00000336083 PPP1R42Q7Z4L9 355 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms