RNA–Protein interactions for RNA: ENST00000328085.10

NPIPA1-201, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPIPA1, Length 1,084 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-201ENST00000328085 ABCC3O15438 1527 aa11.08□□□□□ -0.64
NPIPA1-201ENST00000328085 PLEKHG2Q9H7P9 1386 aa11.07□□□□□ -0.64
NPIPA1-201ENST00000328085 TMEM2Q9UHN6 1383 aa11.07□□□□□ -0.64
NPIPA1-201ENST00000328085 ANKRD33BA6NCL7 494 aa11.07□□□□□ -0.64
NPIPA1-201ENST00000328085 IGSF3O75054 1194 aa11.07□□□□□ -0.64
NPIPA1-201ENST00000328085 PRR29P0C7W0 189 aa11.07□□□□□ -0.64
NPIPA1-201ENST00000328085 SEMA3FQ13275 785 aa11.07□□□□□ -0.64
NPIPA1-201ENST00000328085 OS9Q13438 667 aaPredicted RBP11.07□□□□□ -0.64
NPIPA1-201ENST00000328085 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.07□□□□□ -0.64
NPIPA1-201ENST00000328085 ANKRD20A12PQ8NF67 263 aa11.07□□□□□ -0.64
NPIPA1-201ENST00000328085 FBXO18Q8NFZ0 1043 aa11.07□□□□□ -0.64
NPIPA1-201ENST00000328085 ERO1AQ96HE7 468 aa11.07□□□□□ -0.64
NPIPA1-201ENST00000328085 POLKQ9UBT6 870 aa11.07□□□□□ -0.64
NPIPA1-201ENST00000328085 STAG3Q9UJ98 1225 aa11.07□□□□□ -0.64
NPIPA1-201ENST00000328085 USP47Q96K76 1375 aa11.06□□□□□ -0.64
NPIPA1-201ENST00000328085 SGSM2O43147 1006 aa11.06□□□□□ -0.64
NPIPA1-201ENST00000328085 RPS6KA5O75582 802 aa11.06□□□□□ -0.64
NPIPA1-201ENST00000328085 EIF3JO75822 258 aaKnown RBP11.06□□□□□ -0.64
NPIPA1-201ENST00000328085 MAP2K2P36507 400 aa11.06□□□□□ -0.64
NPIPA1-201ENST00000328085 MKRN4PQ13434 485 aaPredicted RBP11.06□□□□□ -0.64
NPIPA1-201ENST00000328085 MMS22LQ6ZRQ5 1243 aa11.06□□□□□ -0.64
NPIPA1-201ENST00000328085 CCDC112Q8NEF3 446 aa11.06□□□□□ -0.64
NPIPA1-201ENST00000328085 CDCA7LQ96GN5 454 aa11.06□□□□□ -0.64
NPIPA1-201ENST00000328085 NGLY1Q96IV0 654 aa11.06□□□□□ -0.64
NPIPA1-201ENST00000328085 A1CFQ9NQ94 594 aaKnown RBP11.06□□□□□ -0.64
NPIPA1-201ENST00000328085 ANKRD30BQ9BXX2 1392 aa11.05□□□□□ -0.64
NPIPA1-201ENST00000328085 IRF6O14896 467 aa11.05□□□□□ -0.64
NPIPA1-201ENST00000328085 C21orf2O43822 256 aa11.05□□□□□ -0.64
NPIPA1-201ENST00000328085 IGHDP01880 384 aa11.05□□□□□ -0.64
NPIPA1-201ENST00000328085 ZRSR1Q15695 479 aaKnown RBP11.05□□□□□ -0.64
NPIPA1-201ENST00000328085 TPRNQ4KMQ1 711 aa11.05□□□□□ -0.64
NPIPA1-201ENST00000328085 SGSM3Q96HU1 749 aa11.05□□□□□ -0.64
NPIPA1-201ENST00000328085 ELP1O95163 1332 aa11.05□□□□□ -0.64
NPIPA1-201ENST00000328085 TET3O43151 1660 aa11.04□□□□□ -0.64
NPIPA1-201ENST00000328085 ERICH4A6NGS2 130 aa11.04□□□□□ -0.64
NPIPA1-201ENST00000328085 IPO7O95373 1038 aaKnown RBP11.04□□□□□ -0.64
NPIPA1-201ENST00000328085 TPM1P09493 284 aa11.04□□□□□ -0.64
NPIPA1-201ENST00000328085 SARNPP82979 210 aaKnown RBP11.04□□□□□ -0.64
NPIPA1-201ENST00000328085 SLFN5Q08AF3 891 aa11.04□□□□□ -0.64
NPIPA1-201ENST00000328085 CHMP4CQ96CF2 233 aa11.04□□□□□ -0.64
NPIPA1-201ENST00000328085 TEX13AQ9BXU3 409 aaPredicted RBP11.04□□□□□ -0.64
NPIPA1-201ENST00000328085 AHDC1Q5TGY3 1603 aaPredicted RBP11.04□□□□□ -0.64
NPIPA1-201ENST00000328085 RALGAPBQ86X10 1494 aa11.04□□□□□ -0.64
NPIPA1-201ENST00000328085 DIP2AQ14689 1571 aa11.03□□□□□ -0.64
NPIPA1-201ENST00000328085 TMCO5BA8MYB1 307 aa11.03□□□□□ -0.64
NPIPA1-201ENST00000328085 H0YHG0 523 aa11.03□□□□□ -0.64
NPIPA1-201ENST00000328085 ZSCAN26Q16670 478 aa11.03□□□□□ -0.64
NPIPA1-201ENST00000328085 JAKMIP3Q5VZ66 844 aa11.03□□□□□ -0.64
NPIPA1-201ENST00000328085 SYT10Q6XYQ8 523 aa11.03□□□□□ -0.64
NPIPA1-201ENST00000328085 FMNL3Q8IVF7 1028 aa11.03□□□□□ -0.64
NPIPA1-201ENST00000328085 EXOC4Q96A65 974 aa11.03□□□□□ -0.64
NPIPA1-201ENST00000328085 ARGLU1Q9NWB6 273 aaPredicted RBP11.03□□□□□ -0.64
NPIPA1-201ENST00000328085 MKRN1Q9UHC7 482 aaKnown RBP11.03□□□□□ -0.64
NPIPA1-201ENST00000328085 KDM5AP29375 1690 aaKnown RBP11.03□□□□□ -0.64
NPIPA1-201ENST00000328085 NWD1Q149M9 1564 aa11.03□□□□□ -0.64
NPIPA1-201ENST00000328085 ADAMTS2O95450 1211 aa11.02□□□□□ -0.65
NPIPA1-201ENST00000328085 MTA1Q13330 715 aa11.02□□□□□ -0.65
NPIPA1-201ENST00000328085 BRINP3Q76B58 766 aa11.02□□□□□ -0.65
NPIPA1-201ENST00000328085 CCDC125Q86Z20 511 aa11.02□□□□□ -0.65
NPIPA1-201ENST00000328085 ERCC4Q92889 916 aaPredicted RBP11.02□□□□□ -0.65
NPIPA1-201ENST00000328085 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.02□□□□□ -0.65
NPIPA1-201ENST00000328085 RRP15Q9Y3B9 282 aaKnown RBP11.02□□□□□ -0.65
NPIPA1-201ENST00000328085 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.02□□□□□ -0.65
NPIPA1-201ENST00000328085 PIK3C2BO00750 1634 aa11.02□□□□□ -0.65
NPIPA1-201ENST00000328085 CCDC141Q6ZP82 1450 aa11.01□□□□□ -0.65
NPIPA1-201ENST00000328085 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.01□□□□□ -0.65
NPIPA1-201ENST00000328085 NEMFO60524 1076 aa11.01□□□□□ -0.65
NPIPA1-201ENST00000328085 ATF3P18847 181 aa11.01□□□□□ -0.65
NPIPA1-201ENST00000328085 EFCAB13Q8IY85 973 aa11.01□□□□□ -0.65
NPIPA1-201ENST00000328085 MSL3Q8N5Y2 521 aaKnown RBP11.01□□□□□ -0.65
NPIPA1-201ENST00000328085 SPRYD3Q8NCJ5 442 aa11.01□□□□□ -0.65
NPIPA1-201ENST00000328085 TSC1Q92574 1164 aa11.01□□□□□ -0.65
NPIPA1-201ENST00000328085 ZNF446Q9NWS9 450 aa11.01□□□□□ -0.65
NPIPA1-201ENST00000328085 PDZRN3Q9UPQ7 1066 aa11.01□□□□□ -0.65
NPIPA1-201ENST00000328085 CCDC171Q6TFL3 1326 aa11.01□□□□□ -0.65
NPIPA1-201ENST00000328085 SSFA2P28290 1259 aa11□□□□□ -0.65
NPIPA1-201ENST00000328085 IDI1Q13907 227 aa11□□□□□ -0.65
NPIPA1-201ENST00000328085 DHX8Q14562 1220 aaKnown RBP11□□□□□ -0.65
NPIPA1-201ENST00000328085 KRBA2Q6ZNG9 492 aa11□□□□□ -0.65
NPIPA1-201ENST00000328085 ANKRD23Q86SG2 305 aa11□□□□□ -0.65
NPIPA1-201ENST00000328085 CADPS2Q86UW7 1296 aa11□□□□□ -0.65
NPIPA1-201ENST00000328085 C10orf67Q8IYJ2 551 aa11□□□□□ -0.65
NPIPA1-201ENST00000328085 CCDC191Q8NCU4 936 aa11□□□□□ -0.65
NPIPA1-201ENST00000328085 NUCKS1Q9H1E3 243 aaKnown RBP11□□□□□ -0.65
NPIPA1-201ENST00000328085 KCND1Q9NSA2 647 aa11□□□□□ -0.65
NPIPA1-201ENST00000328085 CEP152O94986 1710 aa10.99□□□□□ -0.65
NPIPA1-201ENST00000328085 MPHOSPH10O00566 681 aaKnown RBP10.99□□□□□ -0.65
NPIPA1-201ENST00000328085 TSPY4P0CV99 314 aa10.99□□□□□ -0.65
NPIPA1-201ENST00000328085 TSPY10P0CW01 314 aa10.99□□□□□ -0.65
NPIPA1-201ENST00000328085 H2AFXP16104 143 aaPredicted RBP10.99□□□□□ -0.65
NPIPA1-201ENST00000328085 HDAC1Q13547 482 aaPredicted RBP10.99□□□□□ -0.65
NPIPA1-201ENST00000328085 TMEM132AQ24JP5 1023 aa10.99□□□□□ -0.65
NPIPA1-201ENST00000328085 NBPF8Q3BBV2 869 aa10.99□□□□□ -0.65
NPIPA1-201ENST00000328085 CCDC30Q5VVM6 783 aa10.99□□□□□ -0.65
NPIPA1-201ENST00000328085 MCTP1Q6DN14 999 aa10.99□□□□□ -0.65
NPIPA1-201ENST00000328085 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.99□□□□□ -0.65
NPIPA1-201ENST00000328085 DEFB132Q7Z7B7 95 aa10.99□□□□□ -0.65
NPIPA1-201ENST00000328085 ERC1Q8IUD2 1116 aa10.99□□□□□ -0.65
NPIPA1-201ENST00000328085 AKT1S1Q96B36 256 aa10.99□□□□□ -0.65
NPIPA1-201ENST00000328085 UBXN6Q9BZV1 441 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms