RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 ZSCAN30Q86W11 494 aa19.09■□□□□ 0.65
SMAD6-201ENST00000288840 FAM184AQ8NB25 1140 aa19.09■□□□□ 0.65
SMAD6-201ENST00000288840 BICD2Q8TD16 824 aa19.09■□□□□ 0.65
SMAD6-201ENST00000288840 NBPF4Q96M43 638 aa19.09■□□□□ 0.65
SMAD6-201ENST00000288840 ISY1Q9ULR0 285 aaKnown RBP19.09■□□□□ 0.65
SMAD6-201ENST00000288840 HDAC5Q9UQL6 1122 aa19.08■□□□□ 0.65
SMAD6-201ENST00000288840 ATP6V1DQ9Y5K8 247 aa19.08■□□□□ 0.65
SMAD6-201ENST00000288840 FSD2A1L4K1 749 aa19.08■□□□□ 0.64
SMAD6-201ENST00000288840 TAF7LQ5H9L4 462 aa19.08■□□□□ 0.64
SMAD6-201ENST00000288840 BRPF1P55201 1214 aaPredicted RBP19.08■□□□□ 0.64
SMAD6-201ENST00000288840 DDX11Q96FC9 970 aa19.08■□□□□ 0.64
SMAD6-201ENST00000288840 CNPY2Q9Y2B0 182 aa19.08■□□□□ 0.64
SMAD6-201ENST00000288840 ALKQ9UM73 1620 aa19.08■□□□□ 0.64
SMAD6-201ENST00000288840 VWDEQ8N2E2 1590 aa19.08■□□□□ 0.64
SMAD6-201ENST00000288840 PLEKHG3A1L390 1219 aa19.07■□□□□ 0.64
SMAD6-201ENST00000288840 ANKLE2Q86XL3 938 aa19.07■□□□□ 0.64
SMAD6-201ENST00000288840 CLCN1P35523 988 aa19.07■□□□□ 0.64
SMAD6-201ENST00000288840 CHRNA2Q15822 529 aa19.07■□□□□ 0.64
SMAD6-201ENST00000288840 LARP1BQ659C4 914 aaKnown RBP19.07■□□□□ 0.64
SMAD6-201ENST00000288840 USP25Q9UHP3 1055 aa19.07■□□□□ 0.64
SMAD6-201ENST00000288840 TMEM2Q9UHN6 1383 aa19.07■□□□□ 0.64
SMAD6-201ENST00000288840 LMBRD1Q9NUN5 540 aa19.07■□□□□ 0.64
SMAD6-201ENST00000288840 NDUFB9Q9Y6M9 179 aa19.07■□□□□ 0.64
SMAD6-201ENST00000288840 GLRX3O76003 335 aaKnown RBP19.06■□□□□ 0.64
SMAD6-201ENST00000288840 MYD88Q99836 296 aa19.06■□□□□ 0.64
SMAD6-201ENST00000288840 TFIP11Q9UBB9 837 aaKnown RBP19.06■□□□□ 0.64
SMAD6-201ENST00000288840 LMTK2Q8IWU2 1503 aa19.06■□□□□ 0.64
SMAD6-201ENST00000288840 TTC21AQ8NDW8 1320 aa19.06■□□□□ 0.64
SMAD6-201ENST00000288840 USP48Q86UV5 1035 aa19.05■□□□□ 0.64
SMAD6-201ENST00000288840 CABLES1Q8TDN4 633 aa19.05■□□□□ 0.64
SMAD6-201ENST00000288840 ORAI2Q96SN7 254 aa19.05■□□□□ 0.64
SMAD6-201ENST00000288840 DBF4Q9UBU7 674 aaPredicted RBP19.05■□□□□ 0.64
SMAD6-201ENST00000288840 RAB11FIP3O75154 756 aa19.05■□□□□ 0.64
SMAD6-201ENST00000288840 PRAMEF22A3QJZ6 481 aa19.04■□□□□ 0.64
SMAD6-201ENST00000288840 TMEM63CQ9P1W3 806 aa19.04■□□□□ 0.64
SMAD6-201ENST00000288840 A2ML1A8K2U0 1454 aa19.04■□□□□ 0.64
SMAD6-201ENST00000288840 ARHGEF40Q8TER5 1519 aa19.04■□□□□ 0.64
SMAD6-201ENST00000288840 SETD1BQ9UPS6 1966 aaKnown RBP19.04■□□□□ 0.64
SMAD6-201ENST00000288840 GADD45BO75293 160 aaPredicted RBP19.04■□□□□ 0.64
SMAD6-201ENST00000288840 NSFL1CQ9UNZ2 370 aaKnown RBP19.04■□□□□ 0.64
SMAD6-201ENST00000288840 ARHGAP31Q2M1Z3 1444 aa19.04■□□□□ 0.64
SMAD6-201ENST00000288840 RNF20Q5VTR2 975 aa19.04■□□□□ 0.64
SMAD6-201ENST00000288840 FAM173BQ6P4H8 233 aa19.04■□□□□ 0.64
SMAD6-201ENST00000288840 DEPDC5O75140 1603 aa19.03■□□□□ 0.64
SMAD6-201ENST00000288840 SOS1Q07889 1333 aaPredicted RBP19.03■□□□□ 0.64
SMAD6-201ENST00000288840 HCLS1P14317 486 aaPredicted RBP19.03■□□□□ 0.64
SMAD6-201ENST00000288840 AK2P54819 239 aa19.03■□□□□ 0.64
SMAD6-201ENST00000288840 ANKRD24Q8TF21 1146 aa19.03■□□□□ 0.64
SMAD6-201ENST00000288840 LRRC2Q9BYS8 371 aa19.03■□□□□ 0.64
SMAD6-201ENST00000288840 FRMPD1Q5SYB0 1578 aa19.03■□□□□ 0.64
SMAD6-201ENST00000288840 GIMAP6Q6P9H5 292 aa19.03■□□□□ 0.64
SMAD6-201ENST00000288840 ECHDC1Q9NTX5 307 aa19.03■□□□□ 0.64
SMAD6-201ENST00000288840 LIMCH1Q9UPQ0 1083 aa19.03■□□□□ 0.64
SMAD6-201ENST00000288840 KIAA1210Q9ULL0 1709 aa19.03■□□□□ 0.64
SMAD6-201ENST00000288840 AATKQ6ZMQ8 1374 aa19.02■□□□□ 0.64
SMAD6-201ENST00000288840 PTCH1Q13635 1447 aa19.02■□□□□ 0.64
SMAD6-201ENST00000288840 GJB2P29033 226 aa19.02■□□□□ 0.64
SMAD6-201ENST00000288840 BLOC1S2Q6QNY1 142 aa19.02■□□□□ 0.64
SMAD6-201ENST00000288840 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.02■□□□□ 0.64
SMAD6-201ENST00000288840 MAP3K5Q99683 1374 aa19.02■□□□□ 0.64
SMAD6-201ENST00000288840 NLRP1Q9C000 1473 aa19.02■□□□□ 0.63
SMAD6-201ENST00000288840 CD163L1Q9NR16 1453 aa19.02■□□□□ 0.63
SMAD6-201ENST00000288840 GPT2Q8TD30 523 aa19.02■□□□□ 0.63
SMAD6-201ENST00000288840 DDX17Q92841 729 aaKnown RBP19.02■□□□□ 0.63
SMAD6-201ENST00000288840 ATP7BP35670 1465 aa19.01■□□□□ 0.63
SMAD6-201ENST00000288840 UBE2Q2Q8WVN8 375 aa19.01■□□□□ 0.63
SMAD6-201ENST00000288840 STX6O43752 255 aa19.01■□□□□ 0.63
SMAD6-201ENST00000288840 CSPP1Q1MSJ5 1256 aa19.01■□□□□ 0.63
SMAD6-201ENST00000288840 EDC3Q96F86 508 aaKnown RBP19.01■□□□□ 0.63
SMAD6-201ENST00000288840 SBNO1A3KN83 1393 aa19.01■□□□□ 0.63
SMAD6-201ENST00000288840 CPS1P31327 1500 aa19■□□□□ 0.63
SMAD6-201ENST00000288840 PIK3C2BO00750 1634 aa19■□□□□ 0.63
SMAD6-201ENST00000288840 UBE3BQ7Z3V4 1068 aa19■□□□□ 0.63
SMAD6-201ENST00000288840 SYTL4Q96C24 671 aaPredicted RBP19■□□□□ 0.63
SMAD6-201ENST00000288840 CKAP2LQ8IYA6 745 aa19■□□□□ 0.63
SMAD6-201ENST00000288840 ERBB4Q15303 1308 aa19■□□□□ 0.63
SMAD6-201ENST00000288840 ATF3P18847 181 aa19■□□□□ 0.63
SMAD6-201ENST00000288840 PROSER3Q2NL68 480 aa19■□□□□ 0.63
SMAD6-201ENST00000288840 CCDC39Q9UFE4 941 aa19■□□□□ 0.63
SMAD6-201ENST00000288840 DNM1Q05193 864 aaKnown RBP18.99■□□□□ 0.63
SMAD6-201ENST00000288840 STRN4Q9NRL3 753 aa18.99■□□□□ 0.63
SMAD6-201ENST00000288840 FAM177BA6PVY3 158 aa18.99■□□□□ 0.63
SMAD6-201ENST00000288840 TATP17735 454 aaPredicted RBP18.99■□□□□ 0.63
SMAD6-201ENST00000288840 WASHC4Q2M389 1173 aa18.99■□□□□ 0.63
SMAD6-201ENST00000288840 COPS6Q7L5N1 327 aa18.99■□□□□ 0.63
SMAD6-201ENST00000288840 KIAA0232Q92628 1395 aa18.99■□□□□ 0.63
SMAD6-201ENST00000288840 CHAF1AQ13111 956 aaPredicted RBP18.99■□□□□ 0.63
SMAD6-201ENST00000288840 NFATC2IPQ8NCF5 419 aa18.99■□□□□ 0.63
SMAD6-201ENST00000288840 GCP02774 474 aa18.98■□□□□ 0.63
SMAD6-201ENST00000288840 LRSAM1Q6UWE0 723 aa18.98■□□□□ 0.63
SMAD6-201ENST00000288840 GUCY1B3Q02153 619 aa18.98■□□□□ 0.63
SMAD6-201ENST00000288840 KCNH5Q8NCM2 988 aa18.98■□□□□ 0.63
SMAD6-201ENST00000288840 FAM227BQ96M60 508 aa18.98■□□□□ 0.63
SMAD6-201ENST00000288840 TOMM22Q9NS69 142 aa18.98■□□□□ 0.63
SMAD6-201ENST00000288840 DIP2CQ9Y2E4 1556 aa18.98■□□□□ 0.63
SMAD6-201ENST00000288840 GNL2Q13823 731 aaKnown RBP18.98■□□□□ 0.63
SMAD6-201ENST00000288840 SF3A1Q15459 793 aaKnown RBP18.98■□□□□ 0.63
SMAD6-201ENST00000288840 ERC1Q8IUD2 1116 aa18.98■□□□□ 0.63
SMAD6-201ENST00000288840 RASEFQ8IZ41 740 aa18.98■□□□□ 0.63
SMAD6-201ENST00000288840 XAGE3Q8WTP9 111 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms