RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 PIP4K2AP48426 406 aaPredicted RBP28.01■■■□□ 2.07
PDLIM3-203ENST00000284771 MRPL50Q8N5N7 158 aaKnown RBP28.01■■■□□ 2.07
PDLIM3-203ENST00000284771 CCNL1Q9UK58 526 aaPredicted RBP28.01■■■□□ 2.07
PDLIM3-203ENST00000284771 ANXA1P04083 346 aa28■■■□□ 2.07
PDLIM3-203ENST00000284771 PROSER3Q2NL68 480 aa28■■■□□ 2.07
PDLIM3-203ENST00000284771 SMC4Q9NTJ3 1288 aa28■■■□□ 2.07
PDLIM3-203ENST00000284771 SLC4A2P04920 1241 aa28■■■□□ 2.07
PDLIM3-203ENST00000284771 NBPF26B4DH59 902 aa27.99■■■□□ 2.07
PDLIM3-203ENST00000284771 NBPF14Q5TI25 921 aa27.99■■■□□ 2.07
PDLIM3-203ENST00000284771 NBPF10Q6P3W6 841 aaKnown RBP27.99■■■□□ 2.07
PDLIM3-203ENST00000284771 NBPF15Q8N660 670 aa27.99■■■□□ 2.07
PDLIM3-203ENST00000284771 LINC00116Q8NCU8 138 aa27.99■■■□□ 2.07
PDLIM3-203ENST00000284771 SUPT16HQ9Y5B9 1047 aaKnown RBP27.99■■■□□ 2.07
PDLIM3-203ENST00000284771 TXNRD1Q16881 649 aa27.98■■■□□ 2.07
PDLIM3-203ENST00000284771 COL5A3P25940 1745 aaPredicted RBP27.98■■■□□ 2.07
PDLIM3-203ENST00000284771 MYH14Q7Z406 1995 aaKnown RBP27.98■■■□□ 2.07
PDLIM3-203ENST00000284771 STARD3NLO95772 234 aa27.97■■■□□ 2.07
PDLIM3-203ENST00000284771 BRPF1P55201 1214 aaPredicted RBP27.97■■■□□ 2.07
PDLIM3-203ENST00000284771 G2E3Q7L622 706 aa27.97■■■□□ 2.07
PDLIM3-203ENST00000284771 LRP10Q7Z4F1 713 aa27.97■■■□□ 2.07
PDLIM3-203ENST00000284771 DBF4Q9UBU7 674 aaPredicted RBP27.97■■■□□ 2.07
PDLIM3-203ENST00000284771 ILDR2Q71H61 639 aa27.97■■■□□ 2.07
PDLIM3-203ENST00000284771 TAF1LQ8IZX4 1826 aa27.96■■■□□ 2.07
PDLIM3-203ENST00000284771 STK31Q9BXU1 1019 aa27.96■■■□□ 2.07
PDLIM3-203ENST00000284771 DDX21Q9NR30 783 aaKnown RBP eCLIP27.96■■■□□ 2.07
PDLIM3-203ENST00000284771 CACNA1FO60840 1977 aa27.95■■■□□ 2.07
PDLIM3-203ENST00000284771 INTS5Q6P9B9 1019 aaKnown RBP27.95■■■□□ 2.07
PDLIM3-203ENST00000284771 CHMP4AQ9BY43 222 aa27.95■■■□□ 2.07
PDLIM3-203ENST00000284771 PHAXQ9H814 394 aaKnown RBP27.95■■■□□ 2.07
PDLIM3-203ENST00000284771 CRKLP46109 303 aaKnown RBP27.94■■■□□ 2.06
PDLIM3-203ENST00000284771 EN1Q05925 392 aaPredicted RBP27.94■■■□□ 2.06
PDLIM3-203ENST00000284771 RNF123Q5XPI4 1314 aa27.94■■■□□ 2.06
PDLIM3-203ENST00000284771 PLIN1O60240 522 aa27.94■■■□□ 2.06
PDLIM3-203ENST00000284771 MYL6BP14649 208 aa27.94■■■□□ 2.06
PDLIM3-203ENST00000284771 SLC27A3Q5K4L6 730 aa27.94■■■□□ 2.06
PDLIM3-203ENST00000284771 CAMKK2Q96RR4 588 aa27.94■■■□□ 2.06
PDLIM3-203ENST00000284771 ZBTB1Q9Y2K1 713 aa27.94■■■□□ 2.06
PDLIM3-203ENST00000284771 NOB1Q9ULX3 412 aaKnown RBP27.93■■■□□ 2.06
PDLIM3-203ENST00000284771 ERBB4Q15303 1308 aa27.92■■■□□ 2.06
PDLIM3-203ENST00000284771 DEFB132Q7Z7B7 95 aa27.92■■■□□ 2.06
PDLIM3-203ENST00000284771 EZH2Q15910 746 aaKnown RBP27.91■■■□□ 2.06
PDLIM3-203ENST00000284771 FRAT1Q92837 279 aaPredicted RBP27.91■■■□□ 2.06
PDLIM3-203ENST00000284771 RGPD3A6NKT7 1758 aaPredicted RBP27.91■■■□□ 2.06
PDLIM3-203ENST00000284771 RGPD4Q7Z3J3 1758 aa27.91■■■□□ 2.06
PDLIM3-203ENST00000284771 CANXP27824 592 aaKnown RBP27.91■■■□□ 2.06
PDLIM3-203ENST00000284771 CCDC87Q9NVE4 849 aa27.91■■■□□ 2.06
PDLIM3-203ENST00000284771 RREB1Q92766 1687 aa27.89■■■□□ 2.06
PDLIM3-203ENST00000284771 FLIIQ13045 1269 aa27.89■■■□□ 2.06
PDLIM3-203ENST00000284771 SF3B2Q13435 895 aaKnown RBP27.89■■■□□ 2.06
PDLIM3-203ENST00000284771 CCDC125Q86Z20 511 aa27.89■■■□□ 2.06
PDLIM3-203ENST00000284771 HYPKQ9NX55 129 aa27.89■■■□□ 2.06
PDLIM3-203ENST00000284771 TNNQ9UQP3 1299 aa27.89■■■□□ 2.06
PDLIM3-203ENST00000284771 RRP1P56182 461 aaKnown RBP27.88■■■□□ 2.05
PDLIM3-203ENST00000284771 CNTNAP4Q9C0A0 1308 aa27.88■■■□□ 2.05
PDLIM3-203ENST00000284771 UPF1Q92900 1129 aaKnown RBP eCLIP27.87■■■□□ 2.05
PDLIM3-203ENST00000284771 C4BP0C0L5 1744 aa27.87■■■□□ 2.05
PDLIM3-203ENST00000284771 RC3H1Q5TC82 1133 aaKnown RBP27.87■■■□□ 2.05
PDLIM3-203ENST00000284771 AMIGO3Q86WK7 504 aa27.87■■■□□ 2.05
PDLIM3-203ENST00000284771 KIF16BQ96L93 1317 aa27.86■■■□□ 2.05
PDLIM3-203ENST00000284771 BAG6P46379 1132 aa27.86■■■□□ 2.05
PDLIM3-203ENST00000284771 SMIM5Q71RC9 77 aa27.86■■■□□ 2.05
PDLIM3-203ENST00000284771 COPS6Q7L5N1 327 aa27.86■■■□□ 2.05
PDLIM3-203ENST00000284771 EIF5P55010 431 aaKnown RBP27.85■■■□□ 2.05
PDLIM3-203ENST00000284771 AIMP1Q12904 312 aaKnown RBP27.85■■■□□ 2.05
PDLIM3-203ENST00000284771 XAGE3Q8WTP9 111 aa27.85■■■□□ 2.05
PDLIM3-203ENST00000284771 TRIM27P14373 513 aa27.84■■■□□ 2.05
PDLIM3-203ENST00000284771 IL6STP40189 918 aaPredicted RBP27.84■■■□□ 2.05
PDLIM3-203ENST00000284771 ARHGAP45Q92619 1136 aa27.84■■■□□ 2.05
PDLIM3-203ENST00000284771 C20orf194Q5TEA3 1177 aa27.83■■■□□ 2.05
PDLIM3-203ENST00000284771 ZKSCAN2Q63HK3 967 aa27.83■■■□□ 2.05
PDLIM3-203ENST00000284771 ATF7IPQ6VMQ6 1270 aa27.83■■■□□ 2.05
PDLIM3-203ENST00000284771 TTLL7Q6ZT98 887 aa27.83■■■□□ 2.05
PDLIM3-203ENST00000284771 ZNF330Q9Y3S2 320 aaPredicted RBP27.83■■■□□ 2.05
PDLIM3-203ENST00000284771 FKBP5Q13451 457 aaPredicted RBP27.82■■■□□ 2.04
PDLIM3-203ENST00000284771 PTPRCP08575 1304 aa27.82■■■□□ 2.04
PDLIM3-203ENST00000284771 F6X3S4 739 aa27.81■■■□□ 2.04
PDLIM3-203ENST00000284771 GNPATO15228 680 aa27.81■■■□□ 2.04
PDLIM3-203ENST00000284771 IPO8O15397 1037 aaKnown RBP27.81■■■□□ 2.04
PDLIM3-203ENST00000284771 RPS6KA4O75676 772 aa27.81■■■□□ 2.04
PDLIM3-203ENST00000284771 CLUAP1Q96AJ1 413 aa27.81■■■□□ 2.04
PDLIM3-203ENST00000284771 RLBP1P12271 317 aa27.8■■■□□ 2.04
PDLIM3-203ENST00000284771 PI4KAP2A4QPH2 592 aa27.79■■■□□ 2.04
PDLIM3-203ENST00000284771 ZNF827Q17R98 1081 aa27.79■■■□□ 2.04
PDLIM3-203ENST00000284771 PI4KAP1Q8N8J0 262 aa27.79■■■□□ 2.04
PDLIM3-203ENST00000284771 ADCY9O60503 1353 aa27.79■■■□□ 2.04
PDLIM3-203ENST00000284771 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.78■■■□□ 2.04
PDLIM3-203ENST00000284771 AKT1S1Q96B36 256 aa27.78■■■□□ 2.04
PDLIM3-203ENST00000284771 ANKRD13DQ6ZTN6 518 aa27.78■■■□□ 2.04
PDLIM3-203ENST00000284771 UBR3Q6ZT12 1888 aa27.77■■■□□ 2.04
PDLIM3-203ENST00000284771 KSR2Q6VAB6 950 aa27.77■■■□□ 2.04
PDLIM3-203ENST00000284771 PANK1Q8TE04 598 aa27.77■■■□□ 2.04
PDLIM3-203ENST00000284771 AK7Q96M32 723 aa27.77■■■□□ 2.04
PDLIM3-203ENST00000284771 TBC1D2BQ9UPU7 963 aa27.77■■■□□ 2.04
PDLIM3-203ENST00000284771 API5Q9BZZ5 524 aaKnown RBP27.76■■■□□ 2.03
PDLIM3-203ENST00000284771 RTCBQ9Y3I0 505 aaKnown RBP27.76■■■□□ 2.03
PDLIM3-203ENST00000284771 COL15A1P39059 1388 aa27.76■■■□□ 2.03
PDLIM3-203ENST00000284771 ANO8Q9HCE9 1232 aaPredicted RBP27.75■■■□□ 2.03
PDLIM3-203ENST00000284771 NUP188Q5SRE5 1749 aa27.75■■■□□ 2.03
PDLIM3-203ENST00000284771 IRX6P78412 446 aaPredicted RBP27.75■■■□□ 2.03
PDLIM3-203ENST00000284771 MAP3K2Q9Y2U5 619 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms