RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 TNRQ92752 1358 aa20.44■□□□□ 0.86
RTN1-201ENST00000267484 UQCRHLA0A096LP55 91 aa20.44■□□□□ 0.86
RTN1-201ENST00000267484 UQCRHP07919 91 aa20.44■□□□□ 0.86
RTN1-201ENST00000267484 DDX54Q8TDD1 881 aaKnown RBP20.44■□□□□ 0.86
RTN1-201ENST00000267484 KDRP35968 1356 aa20.44■□□□□ 0.86
RTN1-201ENST00000267484 TCHHQ07283 1943 aa20.44■□□□□ 0.86
RTN1-201ENST00000267484 NBPF7P0C2Y1 421 aaPredicted RBP20.44■□□□□ 0.86
RTN1-201ENST00000267484 HSPA4P34932 840 aa20.44■□□□□ 0.86
RTN1-201ENST00000267484 CEBPAP49715 358 aaPredicted RBP20.44■□□□□ 0.86
RTN1-201ENST00000267484 SOS1Q07889 1333 aaPredicted RBP20.44■□□□□ 0.86
RTN1-201ENST00000267484 CWC27Q6UX04 472 aaKnown RBP20.43■□□□□ 0.86
RTN1-201ENST00000267484 CCDC39Q9UFE4 941 aa20.43■□□□□ 0.86
RTN1-201ENST00000267484 SRGAP3O43295 1099 aa20.43■□□□□ 0.86
RTN1-201ENST00000267484 AMOTL2Q9Y2J4 779 aa20.43■□□□□ 0.86
RTN1-201ENST00000267484 RHPN1Q8TCX5 695 aa20.42■□□□□ 0.86
RTN1-201ENST00000267484 SNX14Q9Y5W7 946 aa20.42■□□□□ 0.86
RTN1-201ENST00000267484 PI4K2BQ8TCG2 481 aa20.42■□□□□ 0.86
RTN1-201ENST00000267484 PTPRUQ92729 1446 aa20.42■□□□□ 0.86
RTN1-201ENST00000267484 RPAP1Q9BWH6 1393 aaPredicted RBP20.41■□□□□ 0.86
RTN1-201ENST00000267484 SSH2Q76I76 1423 aa20.41■□□□□ 0.86
RTN1-201ENST00000267484 AK2P54819 239 aa20.41■□□□□ 0.86
RTN1-201ENST00000267484 C14orf37Q86TY3 774 aa20.41■□□□□ 0.86
RTN1-201ENST00000267484 SSH3Q8TE77 659 aa20.41■□□□□ 0.86
RTN1-201ENST00000267484 USP25Q9UHP3 1055 aa20.41■□□□□ 0.86
RTN1-201ENST00000267484 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.41■□□□□ 0.86
RTN1-201ENST00000267484 WDR33Q9C0J8 1336 aaKnown RBP20.41■□□□□ 0.86
RTN1-201ENST00000267484 PLEKHG5O94827 1062 aa20.41■□□□□ 0.86
RTN1-201ENST00000267484 PDCL3Q9H2J4 239 aa20.41■□□□□ 0.86
RTN1-201ENST00000267484 TUBGCP6Q96RT7 1819 aa20.41■□□□□ 0.86
RTN1-201ENST00000267484 TAF7Q15545 349 aaPredicted RBP20.4■□□□□ 0.86
RTN1-201ENST00000267484 JARID2Q92833 1246 aaPredicted RBP20.4■□□□□ 0.86
RTN1-201ENST00000267484 LARGE1O95461 756 aa20.4■□□□□ 0.86
RTN1-201ENST00000267484 FIBPO43427 364 aa20.4■□□□□ 0.86
RTN1-201ENST00000267484 C17orf53Q8N3J3 647 aaPredicted RBP20.4■□□□□ 0.86
RTN1-201ENST00000267484 SYAP1Q96A49 352 aaPredicted RBP20.4■□□□□ 0.86
RTN1-201ENST00000267484 SGSM2O43147 1006 aa20.39■□□□□ 0.86
RTN1-201ENST00000267484 HOXC9P31274 260 aa20.39■□□□□ 0.86
RTN1-201ENST00000267484 RUFY3Q7L099 469 aa20.39■□□□□ 0.86
RTN1-201ENST00000267484 NALCNQ8IZF0 1738 aa20.39■□□□□ 0.85
RTN1-201ENST00000267484 KCNQ3O43525 872 aa20.39■□□□□ 0.85
RTN1-201ENST00000267484 HCLS1P14317 486 aaPredicted RBP20.39■□□□□ 0.85
RTN1-201ENST00000267484 XRN1Q8IZH2 1706 aaKnown RBP20.38■□□□□ 0.85
RTN1-201ENST00000267484 RAD50Q92878 1312 aa20.38■□□□□ 0.85
RTN1-201ENST00000267484 PLCB2Q00722 1185 aa20.38■□□□□ 0.85
RTN1-201ENST00000267484 LSG1Q9H089 658 aaKnown RBP20.38■□□□□ 0.85
RTN1-201ENST00000267484 TTC21AQ8NDW8 1320 aa20.38■□□□□ 0.85
RTN1-201ENST00000267484 DIP2BQ9P265 1576 aa20.37■□□□□ 0.85
RTN1-201ENST00000267484 SYT1P21579 422 aa20.37■□□□□ 0.85
RTN1-201ENST00000267484 CHPF2Q9P2E5 772 aa20.37■□□□□ 0.85
RTN1-201ENST00000267484 LGR6Q9HBX8 967 aa20.37■□□□□ 0.85
RTN1-201ENST00000267484 PI4KAP2A4QPH2 592 aa20.37■□□□□ 0.85
RTN1-201ENST00000267484 PI4KAP1Q8N8J0 262 aa20.37■□□□□ 0.85
RTN1-201ENST00000267484 MAP3K5Q99683 1374 aa20.37■□□□□ 0.85
RTN1-201ENST00000267484 TOPAZ1Q8N9V7 1692 aa20.37■□□□□ 0.85
RTN1-201ENST00000267484 CASTP20810 708 aaKnown RBP20.36■□□□□ 0.85
RTN1-201ENST00000267484 OS9Q13438 667 aaPredicted RBP20.36■□□□□ 0.85
RTN1-201ENST00000267484 TTC14Q96N46 770 aa20.36■□□□□ 0.85
RTN1-201ENST00000267484 TTC12Q9H892 705 aaPredicted RBP20.36■□□□□ 0.85
RTN1-201ENST00000267484 FAM208AQ9UK61 1670 aaKnown RBP20.36■□□□□ 0.85
RTN1-201ENST00000267484 FMN2Q9NZ56 1722 aa20.36■□□□□ 0.85
RTN1-201ENST00000267484 CCDC83Q8IWF9 413 aa20.36■□□□□ 0.85
RTN1-201ENST00000267484 ZSCAN22P10073 491 aaPredicted RBP20.35■□□□□ 0.85
RTN1-201ENST00000267484 POLA2Q14181 598 aa20.35■□□□□ 0.85
RTN1-201ENST00000267484 ADCK5Q3MIX3 580 aa20.35■□□□□ 0.85
RTN1-201ENST00000267484 STX6O43752 255 aa20.35■□□□□ 0.85
RTN1-201ENST00000267484 PTH1RQ03431 593 aa20.35■□□□□ 0.85
RTN1-201ENST00000267484 DNTTIP2Q5QJE6 756 aaKnown RBP20.35■□□□□ 0.85
RTN1-201ENST00000267484 TSC1Q92574 1164 aa20.35■□□□□ 0.85
RTN1-201ENST00000267484 ABTB2Q8N961 1025 aa20.34■□□□□ 0.85
RTN1-201ENST00000267484 HTATSF1O43719 755 aaKnown RBP20.34■□□□□ 0.85
RTN1-201ENST00000267484 CNTROBQ8N137 903 aa20.34■□□□□ 0.85
RTN1-201ENST00000267484 KIF1BPQ96EK5 621 aa20.34■□□□□ 0.85
RTN1-201ENST00000267484 COL9A3Q14050 684 aaPredicted RBP20.34■□□□□ 0.85
RTN1-201ENST00000267484 GIMAP6Q6P9H5 292 aa20.34■□□□□ 0.85
RTN1-201ENST00000267484 SMC3Q9UQE7 1217 aa20.34■□□□□ 0.85
RTN1-201ENST00000267484 RGPD8O14715 1765 aaPredicted RBP20.33■□□□□ 0.85
RTN1-201ENST00000267484 PA2G4Q9UQ80 394 aaKnown RBP20.33■□□□□ 0.85
RTN1-201ENST00000267484 RAB11FIP3O75154 756 aa20.33■□□□□ 0.84
RTN1-201ENST00000267484 PHF14O94880 888 aa20.33■□□□□ 0.84
RTN1-201ENST00000267484 ADCY5O95622 1261 aa20.33■□□□□ 0.84
RTN1-201ENST00000267484 MCM5P33992 734 aa20.33■□□□□ 0.84
RTN1-201ENST00000267484 LIMCH1Q9UPQ0 1083 aa20.33■□□□□ 0.84
RTN1-201ENST00000267484 AOX1Q06278 1338 aa20.33■□□□□ 0.84
RTN1-201ENST00000267484 TERF1P54274 439 aa20.33■□□□□ 0.84
RTN1-201ENST00000267484 CSPP1Q1MSJ5 1256 aa20.33■□□□□ 0.84
RTN1-201ENST00000267484 PRPF40BQ6NWY9 871 aaKnown RBP20.33■□□□□ 0.84
RTN1-201ENST00000267484 DNM1Q05193 864 aaKnown RBP20.32■□□□□ 0.84
RTN1-201ENST00000267484 KIAA2012Q0VF49 1180 aa20.32■□□□□ 0.84
RTN1-201ENST00000267484 CCDC183Q5T5S1 534 aa20.32■□□□□ 0.84
RTN1-201ENST00000267484 IL17RAQ96F46 866 aa20.32■□□□□ 0.84
RTN1-201ENST00000267484 CHMP3Q9Y3E7 222 aa20.32■□□□□ 0.84
RTN1-201ENST00000267484 F13A1P00488 732 aa20.31■□□□□ 0.84
RTN1-201ENST00000267484 NECAB1Q8N987 351 aa20.31■□□□□ 0.84
RTN1-201ENST00000267484 JAKMIP1Q96N16 626 aaKnown RBP20.31■□□□□ 0.84
RTN1-201ENST00000267484 BEND3Q5T5X7 828 aa20.31■□□□□ 0.84
RTN1-201ENST00000267484 DNAAF4Q8WXU2 420 aa20.31■□□□□ 0.84
RTN1-201ENST00000267484 RBM33Q96EV2 1170 aaKnown RBP20.31■□□□□ 0.84
RTN1-201ENST00000267484 PKNOX2Q96KN3 472 aa20.31■□□□□ 0.84
RTN1-201ENST00000267484 SETD1BQ9UPS6 1966 aaKnown RBP20.31■□□□□ 0.84
RTN1-201ENST00000267484 GJB2P29033 226 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms