RNA–Protein interactions for RNA: ENST00000235372.11

PRDM2-201, Transcript of PR/SET domain 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRDM2, Length 7,957 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-201ENST00000235372 CCDC89Q8N998 374 aa8.69□□□□□ -1.02
PRDM2-201ENST00000235372 NUP62CLQ9H1M0 184 aa8.69□□□□□ -1.02
PRDM2-201ENST00000235372 STX6O43752 255 aa8.69□□□□□ -1.02
PRDM2-201ENST00000235372 MYO1BO43795 1136 aa8.69□□□□□ -1.02
PRDM2-201ENST00000235372 KIAA1524Q8TCG1 905 aa8.69□□□□□ -1.02
PRDM2-201ENST00000235372 STARD3NLO95772 234 aa8.69□□□□□ -1.02
PRDM2-201ENST00000235372 MAP4K4O95819 1239 aaPredicted RBP8.69□□□□□ -1.02
PRDM2-201ENST00000235372 CCT4P50991 539 aaKnown RBP8.69□□□□□ -1.02
PRDM2-201ENST00000235372 AMPD3Q01432 767 aa8.69□□□□□ -1.02
PRDM2-201ENST00000235372 ZBTB16Q05516 673 aa8.69□□□□□ -1.02
PRDM2-201ENST00000235372 STAC3Q96MF2 364 aa8.69□□□□□ -1.02
PRDM2-201ENST00000235372 CEP126Q9P2H0 1117 aa8.69□□□□□ -1.02
PRDM2-201ENST00000235372 IDH1O75874 414 aaKnown RBP8.69□□□□□ -1.02
PRDM2-201ENST00000235372 MTHFSP49914 203 aa8.69□□□□□ -1.02
PRDM2-201ENST00000235372 PROSER2Q86WR7 435 aaPredicted RBP8.69□□□□□ -1.02
PRDM2-201ENST00000235372 RSPH3Q86UC2 560 aa8.69□□□□□ -1.02
PRDM2-201ENST00000235372 CCDC63Q8NA47 563 aa8.69□□□□□ -1.02
PRDM2-201ENST00000235372 CALML4Q96GE6 196 aa8.69□□□□□ -1.02
PRDM2-201ENST00000235372 HMGB1P09429 215 aaKnown RBP8.68□□□□□ -1.02
PRDM2-201ENST00000235372 USP37Q86T82 979 aa8.68□□□□□ -1.02
PRDM2-201ENST00000235372 CEP112Q8N8E3 955 aa8.68□□□□□ -1.02
PRDM2-201ENST00000235372 L3MBTL2Q969R5 705 aa8.68□□□□□ -1.02
PRDM2-201ENST00000235372 CCDC144CPQ8IYA2 1237 aa8.68□□□□□ -1.02
PRDM2-201ENST00000235372 PDCL2Q8N4E4 241 aa8.68□□□□□ -1.02
PRDM2-201ENST00000235372 RAB3GAP2Q9H2M9 1393 aa8.68□□□□□ -1.02
PRDM2-201ENST00000235372 KIF4BQ2VIQ3 1234 aa8.68□□□□□ -1.02
PRDM2-201ENST00000235372 PDRG1Q9NUG6 133 aa8.68□□□□□ -1.02
PRDM2-201ENST00000235372 YEATS4O95619 227 aa8.68□□□□□ -1.02
PRDM2-201ENST00000235372 NLRP5P59047 1200 aa8.68□□□□□ -1.02
PRDM2-201ENST00000235372 GRM1Q13255 1194 aa8.68□□□□□ -1.02
PRDM2-201ENST00000235372 KLHL10Q6JEL2 608 aa8.68□□□□□ -1.02
PRDM2-201ENST00000235372 AACSQ86V21 672 aa8.68□□□□□ -1.02
PRDM2-201ENST00000235372 CCT6BQ92526 530 aa8.68□□□□□ -1.02
PRDM2-201ENST00000235372 FAM114A1Q8IWE2 563 aa8.68□□□□□ -1.02
PRDM2-201ENST00000235372 CTCFLQ8NI51 663 aaPredicted RBP8.68□□□□□ -1.02
PRDM2-201ENST00000235372 ZSCAN31Q96LW9 406 aaPredicted RBP8.68□□□□□ -1.02
PRDM2-201ENST00000235372 SMC6Q96SB8 1091 aa8.68□□□□□ -1.02
PRDM2-201ENST00000235372 MINDY4BA8MYZ0 360 aa8.68□□□□□ -1.02
PRDM2-201ENST00000235372 CKAP2LQ8IYA6 745 aa8.68□□□□□ -1.02
PRDM2-201ENST00000235372 AKAP2Q9Y2D5 859 aa8.68□□□□□ -1.02
PRDM2-201ENST00000235372 PRKCSHP14314 528 aaPredicted RBP8.67□□□□□ -1.02
PRDM2-201ENST00000235372 SPTY2D1Q68D10 685 aaPredicted RBP8.67□□□□□ -1.02
PRDM2-201ENST00000235372 CTR9Q6PD62 1173 aa8.67□□□□□ -1.02
PRDM2-201ENST00000235372 CCDC12Q8WUD4 166 aaPredicted RBP8.67□□□□□ -1.02
PRDM2-201ENST00000235372 NSRP1Q9H0G5 558 aaKnown RBP8.67□□□□□ -1.02
PRDM2-201ENST00000235372 CKAP4Q07065 602 aaKnown RBP8.67□□□□□ -1.02
PRDM2-201ENST00000235372 HDGFL1Q5TGJ6 251 aa8.67□□□□□ -1.02
PRDM2-201ENST00000235372 TCERG1LQ5VWI1 586 aa8.67□□□□□ -1.02
PRDM2-201ENST00000235372 PAIP2Q9BPZ3 127 aaKnown RBP8.67□□□□□ -1.02
PRDM2-201ENST00000235372 KIF3CO14782 793 aa8.67□□□□□ -1.02
PRDM2-201ENST00000235372 KIAA0753Q2KHM9 967 aa8.67□□□□□ -1.02
PRDM2-201ENST00000235372 MAATS1Q7Z4T9 603 aa8.67□□□□□ -1.02
PRDM2-201ENST00000235372 WDR63Q8IWG1 891 aa8.67□□□□□ -1.02
PRDM2-201ENST00000235372 GCC1Q96CN9 775 aa8.67□□□□□ -1.02
PRDM2-201ENST00000235372 HAUS7Q99871 368 aa8.67□□□□□ -1.02
PRDM2-201ENST00000235372 PFDN4Q9NQP4 134 aa8.67□□□□□ -1.02
PRDM2-201ENST00000235372 PPP6R1Q9UPN7 881 aa8.67□□□□□ -1.02
PRDM2-201ENST00000235372 POTEB2H3BUK9 544 aa8.67□□□□□ -1.02
PRDM2-201ENST00000235372 FILIP1Q7Z7B0 1213 aa8.67□□□□□ -1.02
PRDM2-201ENST00000235372 CRCPO75575 148 aa8.67□□□□□ -1.02
PRDM2-201ENST00000235372 CUL4BQ13620 913 aa8.67□□□□□ -1.02
PRDM2-201ENST00000235372 IQCA1Q86XH1 822 aa8.67□□□□□ -1.02
PRDM2-201ENST00000235372 TXNDC16Q9P2K2 825 aa8.67□□□□□ -1.02
PRDM2-201ENST00000235372 C11orf95C9JLR9 678 aaPredicted RBP8.67□□□□□ -1.02
PRDM2-201ENST00000235372 CYB5RLQ6IPT4 315 aa8.67□□□□□ -1.02
PRDM2-201ENST00000235372 CLIP2Q9UDT6 1046 aa8.67□□□□□ -1.02
PRDM2-201ENST00000235372 RIOK3O14730 519 aaKnown RBP8.66□□□□□ -1.02
PRDM2-201ENST00000235372 OPA1O60313 960 aa8.66□□□□□ -1.02
PRDM2-201ENST00000235372 PHACTR2O75167 634 aa8.66□□□□□ -1.02
PRDM2-201ENST00000235372 METTL24Q5JXM2 366 aa8.66□□□□□ -1.02
PRDM2-201ENST00000235372 U3KPZ7 1027 aaPredicted RBP8.66□□□□□ -1.02
PRDM2-201ENST00000235372 ZBED9Q6R2W3 1325 aa8.66□□□□□ -1.02
PRDM2-201ENST00000235372 ZBTB24O43167 697 aaPredicted RBP8.66□□□□□ -1.02
PRDM2-201ENST00000235372 SFPQP23246 707 aaKnown RBP eCLIP8.66□□□□□ -1.02
PRDM2-201ENST00000235372 MTIF2P46199 727 aaKnown RBP8.66□□□□□ -1.02
PRDM2-201ENST00000235372 CCDC40Q4G0X9 1142 aa8.66□□□□□ -1.02
PRDM2-201ENST00000235372 NCAPGQ9BPX3 1015 aa8.66□□□□□ -1.02
PRDM2-201ENST00000235372 TMX1Q9H3N1 280 aa8.66□□□□□ -1.02
PRDM2-201ENST00000235372 GOLGA6L9A6NEM1 432 aa8.66□□□□□ -1.02
PRDM2-201ENST00000235372 TOP1P11387 765 aaKnown RBP8.66□□□□□ -1.02
PRDM2-201ENST00000235372 CABP5Q9NP86 173 aa8.66□□□□□ -1.02
PRDM2-201ENST00000235372 RASAL2Q9UJF2 1139 aa8.66□□□□□ -1.02
PRDM2-201ENST00000235372 FAM114A2Q9NRY5 505 aa8.66□□□□□ -1.02
PRDM2-201ENST00000235372 KMT5BQ4FZB7 885 aa8.66□□□□□ -1.02
PRDM2-201ENST00000235372 LRRC27Q9C0I9 530 aa8.66□□□□□ -1.02
PRDM2-201ENST00000235372 PTPN14Q15678 1187 aa8.65□□□□□ -1.02
PRDM2-201ENST00000235372 EPSTI1Q96J88 318 aa8.65□□□□□ -1.02
PRDM2-201ENST00000235372 CCDC194A0A1B0GVG4 234 aa8.65□□□□□ -1.02
PRDM2-201ENST00000235372 VIMP08670 466 aaKnown RBP8.65□□□□□ -1.02
PRDM2-201ENST00000235372 MAP3K11Q16584 847 aa8.65□□□□□ -1.02
PRDM2-201ENST00000235372 FEZ2Q9UHY8 353 aaPredicted RBP8.65□□□□□ -1.02
PRDM2-201ENST00000235372 IFIT1P09914 478 aaKnown RBP8.65□□□□□ -1.02
PRDM2-201ENST00000235372 NAPBQ9H115 298 aa8.65□□□□□ -1.02
PRDM2-201ENST00000235372 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.65□□□□□ -1.022e-7■■■□□ 16.5
PRDM2-201ENST00000235372 MYH11P35749 1972 aa8.65□□□□□ -1.02
PRDM2-201ENST00000235372 GON4LQ3T8J9 2241 aa8.65□□□□□ -1.02
PRDM2-201ENST00000235372 B4DLN1 442 aa8.65□□□□□ -1.02
PRDM2-201ENST00000235372 ATP2A1O14983 1001 aa8.65□□□□□ -1.02
PRDM2-201ENST00000235372 CNGA1P29973 690 aa8.65□□□□□ -1.02
PRDM2-201ENST00000235372 MRPL12P52815 198 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms