RNA–Protein interactions for RNA: ENST00000193403.10

ACTN1-201, Transcript of actinin alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACTN1, Length 3,779 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-201ENST00000193403 CCDC186Q7Z3E2 898 aa13.34□□□□□ -0.27
ACTN1-201ENST00000193403 LUZP1Q86V48 1076 aa13.34□□□□□ -0.27
ACTN1-201ENST00000193403 SMAP1Q8IYB5 467 aaPredicted RBP13.34□□□□□ -0.27
ACTN1-201ENST00000193403 CCDC61Q9Y6R9 512 aa13.34□□□□□ -0.27
ACTN1-201ENST00000193403 CLEC17AQ6ZS10 378 aa13.34□□□□□ -0.27
ACTN1-201ENST00000193403 CGNQ9P2M7 1197 aaKnown RBP13.33□□□□□ -0.27
ACTN1-201ENST00000193403 CYP46A1Q9Y6A2 500 aa13.33□□□□□ -0.27
ACTN1-201ENST00000193403 KRT85P78386 507 aa13.33□□□□□ -0.28
ACTN1-201ENST00000193403 PPP1R42Q7Z4L9 355 aa13.33□□□□□ -0.28
ACTN1-201ENST00000193403 RUFY2Q8WXA3 655 aa13.33□□□□□ -0.28
ACTN1-201ENST00000193403 SIL1Q9H173 461 aa13.33□□□□□ -0.28
ACTN1-201ENST00000193403 PYCARDQ9ULZ3 195 aa13.33□□□□□ -0.28
ACTN1-201ENST00000193403 ERICH4A6NGS2 130 aa13.33□□□□□ -0.28
ACTN1-201ENST00000193403 F13A1P00488 732 aa13.33□□□□□ -0.28
ACTN1-201ENST00000193403 MAP3K11Q16584 847 aa13.33□□□□□ -0.28
ACTN1-201ENST00000193403 CCDC112Q8NEF3 446 aa13.33□□□□□ -0.28
ACTN1-201ENST00000193403 DDX11Q96FC9 970 aa13.33□□□□□ -0.28
ACTN1-201ENST00000193403 ZFYVE16Q7Z3T8 1539 aa13.33□□□□□ -0.28
ACTN1-201ENST00000193403 TRMT1Q9NXH9 659 aaKnown RBP13.32□□□□□ -0.28
ACTN1-201ENST00000193403 WASLO00401 505 aaPredicted RBP13.32□□□□□ -0.28
ACTN1-201ENST00000193403 CSB-PGBD3P0DP91 1061 aa13.32□□□□□ -0.28
ACTN1-201ENST00000193403 TEFQ10587 303 aa13.32□□□□□ -0.28
ACTN1-201ENST00000193403 GPATCH3Q96I76 525 aa13.32□□□□□ -0.28
ACTN1-201ENST00000193403 FMNL2Q96PY5 1086 aa13.32□□□□□ -0.28
ACTN1-201ENST00000193403 TNNT1P13805 278 aa13.32□□□□□ -0.28
ACTN1-201ENST00000193403 CLASRPQ8N2M8 674 aaKnown RBP13.32□□□□□ -0.28
ACTN1-201ENST00000193403 PUS7Q96PZ0 661 aaKnown RBP13.32□□□□□ -0.28
ACTN1-201ENST00000193403 YTHDC2Q9H6S0 1430 aaKnown RBP13.31□□□□□ -0.28
ACTN1-201ENST00000193403 ZNF853P0CG23 659 aa13.31□□□□□ -0.28
ACTN1-201ENST00000193403 LRMPQ12912 555 aa13.31□□□□□ -0.28
ACTN1-201ENST00000193403 GORABQ5T7V8 394 aa13.31□□□□□ -0.28
ACTN1-201ENST00000193403 SPATA32Q96LK8 384 aa13.31□□□□□ -0.28
ACTN1-201ENST00000193403 PTCH1Q13635 1447 aa13.31□□□□□ -0.28
ACTN1-201ENST00000193403 RAB11FIP3O75154 756 aa13.31□□□□□ -0.28
ACTN1-201ENST00000193403 UVSSAQ2YD98 709 aa13.31□□□□□ -0.28
ACTN1-201ENST00000193403 INTS4Q96HW7 963 aaKnown RBP13.31□□□□□ -0.28
ACTN1-201ENST00000193403 FSD1Q9BTV5 496 aa13.3□□□□□ -0.28
ACTN1-201ENST00000193403 BRPF1P55201 1214 aaPredicted RBP13.3□□□□□ -0.28
ACTN1-201ENST00000193403 MTHFSDQ2M296 383 aaKnown RBP13.3□□□□□ -0.28
ACTN1-201ENST00000193403 TRERF1Q96PN7 1200 aa13.3□□□□□ -0.28
ACTN1-201ENST00000193403 DACT1Q9NYF0 836 aa13.3□□□□□ -0.28
ACTN1-201ENST00000193403 KIF1BO60333 1816 aa13.29□□□□□ -0.28
ACTN1-201ENST00000193403 CHL1O00533 1208 aa13.29□□□□□ -0.28
ACTN1-201ENST00000193403 ANO6Q4KMQ2 910 aa13.29□□□□□ -0.28
ACTN1-201ENST00000193403 RASEFQ8IZ41 740 aa13.29□□□□□ -0.28
ACTN1-201ENST00000193403 CFAP74Q9C0B2 1584 aa13.29□□□□□ -0.28
ACTN1-201ENST00000193403 ANAPC15P60006 121 aa13.29□□□□□ -0.28
ACTN1-201ENST00000193403 RHPN1Q8TCX5 695 aa13.29□□□□□ -0.28
ACTN1-201ENST00000193403 TET3O43151 1660 aa13.29□□□□□ -0.28
ACTN1-201ENST00000193403 LTKP29376 864 aa13.29□□□□□ -0.28
ACTN1-201ENST00000193403 TAF7Q15545 349 aaPredicted RBP13.29□□□□□ -0.28
ACTN1-201ENST00000193403 ATP2B3Q16720 1220 aa13.29□□□□□ -0.28
ACTN1-201ENST00000193403 SNX14Q9Y5W7 946 aa13.29□□□□□ -0.28
ACTN1-201ENST00000193403 LRRC7Q96NW7 1537 aa13.29□□□□□ -0.28
ACTN1-201ENST00000193403 TULP4Q9NRJ4 1543 aa13.29□□□□□ -0.28
ACTN1-201ENST00000193403 FAM135BQ49AJ0 1406 aa13.28□□□□□ -0.28
ACTN1-201ENST00000193403 QRICH2Q9H0J4 1663 aa13.28□□□□□ -0.28
ACTN1-201ENST00000193403 ATP8B2P98198 1209 aa13.28□□□□□ -0.28
ACTN1-201ENST00000193403 AACSQ86V21 672 aa13.28□□□□□ -0.28
ACTN1-201ENST00000193403 PHAXQ9H814 394 aaKnown RBP13.28□□□□□ -0.28
ACTN1-201ENST00000193403 ZFYVE9O95405 1425 aa13.28□□□□□ -0.28
ACTN1-201ENST00000193403 SHPRHQ149N8 1683 aa13.28□□□□□ -0.28
ACTN1-201ENST00000193403 DNAJC25Q9H1X3 360 aa13.28□□□□□ -0.28
ACTN1-201ENST00000193403 CCDC8Q9H0W5 538 aaPredicted RBP13.28□□□□□ -0.28
ACTN1-201ENST00000193403 IL25Q9H293 177 aa13.28□□□□□ -0.28
ACTN1-201ENST00000193403 CLIP2Q9UDT6 1046 aa13.28□□□□□ -0.28
ACTN1-201ENST00000193403 LARGE1O95461 756 aa13.27□□□□□ -0.28
ACTN1-201ENST00000193403 TPM3P06753 285 aa13.27□□□□□ -0.29
ACTN1-201ENST00000193403 THEMISQ8N1K5 641 aaPredicted RBP13.27□□□□□ -0.29
ACTN1-201ENST00000193403 ZBTB9Q96C00 473 aa13.27□□□□□ -0.29
ACTN1-201ENST00000193403 KIF1BPQ96EK5 621 aa13.27□□□□□ -0.29
ACTN1-201ENST00000193403 PA2G4Q9UQ80 394 aaKnown RBP13.27□□□□□ -0.29
ACTN1-201ENST00000193403 ZNF165P49910 485 aa13.27□□□□□ -0.29
ACTN1-201ENST00000193403 TYRO3Q06418 890 aa13.27□□□□□ -0.29
ACTN1-201ENST00000193403 CUL4AQ13619 759 aa13.27□□□□□ -0.29
ACTN1-201ENST00000193403 ABTB2Q8N961 1025 aa13.27□□□□□ -0.29
ACTN1-201ENST00000193403 BOLA2Q9H3K6 86 aa13.27□□□□□ -0.29
ACTN1-201ENST00000193403 NEO1Q92859 1461 aa13.27□□□□□ -0.29
ACTN1-201ENST00000193403 BLOC1S2Q6QNY1 142 aa13.26□□□□□ -0.29
ACTN1-201ENST00000193403 NAA30Q147X3 362 aaPredicted RBP13.26□□□□□ -0.29
ACTN1-201ENST00000193403 SF3A1Q15459 793 aaKnown RBP13.26□□□□□ -0.29
ACTN1-201ENST00000193403 RUFY3Q7L099 469 aa13.26□□□□□ -0.29
ACTN1-201ENST00000193403 HOMER1Q86YM7 354 aa13.26□□□□□ -0.29
ACTN1-201ENST00000193403 FAM200AQ8TCP9 573 aa13.26□□□□□ -0.29
ACTN1-201ENST00000193403 NRBP1Q9UHY1 535 aa13.26□□□□□ -0.29
ACTN1-201ENST00000193403 GUCY1B3Q02153 619 aa13.26□□□□□ -0.29
ACTN1-201ENST00000193403 AMOTL2Q9Y2J4 779 aa13.26□□□□□ -0.29
ACTN1-201ENST00000193403 ABCA9Q8IUA7 1624 aa13.26□□□□□ -0.29
ACTN1-201ENST00000193403 HTATSF1O43719 755 aaKnown RBP13.25□□□□□ -0.29
ACTN1-201ENST00000193403 LIG1P18858 919 aa13.25□□□□□ -0.29
ACTN1-201ENST00000193403 SYTL4Q96C24 671 aaPredicted RBP13.25□□□□□ -0.29
ACTN1-201ENST00000193403 LRRC2Q9BYS8 371 aa13.25□□□□□ -0.29
ACTN1-201ENST00000193403 G3BP1Q13283 466 aaKnown RBP eCLIP13.25□□□□□ -0.291e-7■■□□□ 12.9
ACTN1-201ENST00000193403 STK11IPQ8N1F8 1099 aa13.25□□□□□ -0.29
ACTN1-201ENST00000193403 PI4KAP2A4QPH2 592 aa13.25□□□□□ -0.29
ACTN1-201ENST00000193403 HSPA4P34932 840 aa13.25□□□□□ -0.29
ACTN1-201ENST00000193403 PI4KAP1Q8N8J0 262 aa13.25□□□□□ -0.29
ACTN1-201ENST00000193403 TNRQ92752 1358 aa13.24□□□□□ -0.29
ACTN1-201ENST00000193403 A0A087WWV3 80 aa13.24□□□□□ -0.29
ACTN1-201ENST00000193403 NRDCO43847 1150 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 454.3 ms