RNA–Protein interactions for RNA: ENSMUST00000200170.1

Gm42878-202, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Gm42878, Length 4,783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm42878-202ENSMUST00000200170 Plekhd1B2RPU2 505 aa16.03■□□□□ 0.16
Gm42878-202ENSMUST00000200170 Cct2P80314 535 aaKnown RBP16.02■□□□□ 0.16
Gm42878-202ENSMUST00000200170 Ptch1Q61115 1434 aa16.02■□□□□ 0.16
Gm42878-202ENSMUST00000200170 Atf7Q8R0S1 413 aa16.02■□□□□ 0.16
Gm42878-202ENSMUST00000200170 TimelessQ9R1X4 1197 aa16.02■□□□□ 0.16
Gm42878-202ENSMUST00000200170 AU022751B1B0V2 589 aa16.02■□□□□ 0.16
Gm42878-202ENSMUST00000200170 Zkscan7E9PVW1 718 aa16.02■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Gcom1E9PZ54 550 aa16.02■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Pa2g4P50580 394 aaKnown RBP16.02■□□□□ 0.15
Gm42878-202ENSMUST00000200170 MyzapQ3UIJ9 466 aa16.02■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Kri1Q8VDQ9 704 aaKnown RBP16.02■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Ppp6r3Q922D4 844 aa16.02■□□□□ 0.15
Gm42878-202ENSMUST00000200170 NefhP19246 1090 aa16.01■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Tpm4Q6IRU2 248 aa16.01■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Gigyf1Q99MR1 1044 aaKnown RBP16.01■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Chd1lQ9CXF7 900 aa16.01■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Mmel1Q9JLI3 765 aa16.01■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Igbp1bQ9QZ29 343 aa16.01■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Gas2l3Q3UWW6 683 aa16.01■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Slu7Q8BHJ9 585 aa16.01■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Tmem67Q8BR76 992 aa16.01■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Ncbp3Q8BZR9 615 aaKnown RBP16.01■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Kdm4cQ8VCD7 1054 aa16.01■□□□□ 0.15
Gm42878-202ENSMUST00000200170 AnkarA2RT91 1465 aa16.01■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Cavin1O54724 392 aa16■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Anp32eP97822 260 aaKnown RBP16■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Rbm8a2A0A0N4SUH6 174 aa16■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Snap23O09044 210 aa16■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Limch1Q3UH68 1057 aa16■□□□□ 0.15
Gm42878-202ENSMUST00000200170 ImmtQ8CAQ8 757 aaKnown RBP16■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Rbm8aQ9CWZ3 174 aa16■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Cyp27a1Q9DBG1 533 aa16■□□□□ 0.15
Gm42878-202ENSMUST00000200170 TbcaP48428 108 aaKnown RBP16■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Bms1Q6PGF5 1284 aaKnown RBP16■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Pdcl2Q78Y63 240 aa16■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Nol11Q8BJW5 723 aaKnown RBP16■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Ccdc34Q3UI66 367 aa15.99■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Ddx54Q8K4L0 874 aaKnown RBP15.99■□□□□ 0.15
Gm42878-202ENSMUST00000200170 SelenooQ9DBC0 667 aa15.99■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Tmco3Q8BH01 678 aa15.99■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Pdzrn3Q69ZS0 1063 aa15.99■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Golim4Q8BXA1 655 aa15.99■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Slc5a1Q8C3K6 665 aa15.99■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Trim34bJ3QNR8 485 aa15.98■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Bloc1s2Q9CWG9 143 aa15.98■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Lmbr1lQ9D1E5 489 aa15.98■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Usp54Q8BL06 1588 aaKnown RBP15.98■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Atg4a-psA0A0G2JFS9 396 aa15.98■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Ier5O89113 308 aa15.98■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Atg4aQ8C9S8 396 aa15.98■□□□□ 0.15
Gm42878-202ENSMUST00000200170 DmtnQ9WV69 405 aa15.98■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Eif5P59325 429 aaKnown RBP15.98■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Gse1Q3U3C9 1213 aa15.98■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Ddx58Q6Q899 926 aa15.98■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Fam193aQ8CGI1 1231 aaKnown RBP15.98■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Krt84Q99M73 603 aa15.98■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Astn2Q80Z10 1352 aa15.98■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Mmp8O70138 465 aa15.97■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Snx13Q6PHS6 957 aa15.97■□□□□ 0.15
Gm42878-202ENSMUST00000200170 P2rx7Q9Z1M0 595 aa15.97■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Cfap73J3QPZ5 306 aa15.97■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Ddx46Q569Z5 1032 aaKnown RBP15.97■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Bag1Q60739 355 aa15.97■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Tmem87bQ8BKU8 555 aa15.97■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Cdkl5Q3UTQ8 938 aa15.97■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Vps53Q8CCB4 832 aa15.97■□□□□ 0.15
Gm42878-202ENSMUST00000200170 GckrQ91X44 587 aa15.96■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Amotl1Q9D4H4 968 aa15.96■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Myom2Q14BI5 1463 aa15.96■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Cep55Q8BT07 462 aa15.96■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Ift57Q8BXG3 429 aa15.96■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Plch2A2AP18 1501 aa15.96■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Tulp4Q9JIL5 1547 aa15.96■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Prl7d1P04769 244 aa15.96■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Stat1P42225 749 aa15.96■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Serpina10Q8R121 448 aa15.96■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Tbc1d7Q9D0K0 293 aa15.96■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Efcab6Q6P1E8 1516 aa15.96■□□□□ 0.15
Gm42878-202ENSMUST00000200170 Usp25P57080 1055 aa15.96■□□□□ 0.14
Gm42878-202ENSMUST00000200170 Gnat3Q3V3I2 354 aa15.96■□□□□ 0.14
Gm42878-202ENSMUST00000200170 Trim28Q62318 834 aa15.96■□□□□ 0.14
Gm42878-202ENSMUST00000200170 ApobrQ8VBT6 942 aa15.96■□□□□ 0.14
Gm42878-202ENSMUST00000200170 Arid4aF8VPQ2 1261 aaKnown RBP15.95■□□□□ 0.14
Gm42878-202ENSMUST00000200170 Grm8P47743 908 aa15.95■□□□□ 0.14
Gm42878-202ENSMUST00000200170 Tm6sf1P58749 370 aa15.95■□□□□ 0.14
Gm42878-202ENSMUST00000200170 Ehmt1Q5DW34 1296 aa15.95■□□□□ 0.14
Gm42878-202ENSMUST00000200170 Jarid2Q62315 1234 aa15.95■□□□□ 0.14
Gm42878-202ENSMUST00000200170 Otud6bQ8K2H2 294 aa15.95■□□□□ 0.14
Gm42878-202ENSMUST00000200170 Kif1bQ60575 1816 aaKnown RBP15.95■□□□□ 0.14
Gm42878-202ENSMUST00000200170 Setbp1Q9Z180 1582 aa15.95■□□□□ 0.14
Gm42878-202ENSMUST00000200170 Cbx1P83917 185 aaKnown RBP15.95■□□□□ 0.14
Gm42878-202ENSMUST00000200170 Gnl2Q99LH1 728 aaKnown RBP15.95■□□□□ 0.14
Gm42878-202ENSMUST00000200170 Dnaaf4Q8R368 420 aa15.95■□□□□ 0.14
Gm42878-202ENSMUST00000200170 Gm45015A0A140LII9 184 aa15.94■□□□□ 0.14
Gm42878-202ENSMUST00000200170 Gm18336A0A140LIU8 765 aa15.94■□□□□ 0.14
Gm42878-202ENSMUST00000200170 Ccdc158Q8CDI6 1109 aa15.94■□□□□ 0.14
Gm42878-202ENSMUST00000200170 SetQ9EQU5 289 aaKnown RBP15.94■□□□□ 0.14
Gm42878-202ENSMUST00000200170 Rbbp8nlA2ABX0 614 aa15.94■□□□□ 0.14
Gm42878-202ENSMUST00000200170 Myd88P22366 296 aa15.94■□□□□ 0.14
Gm42878-202ENSMUST00000200170 Syt1P46096 421 aa15.94■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 556.2 ms