RNA–Protein interactions for RNA: ENSMUST00000112298.9

Ssh1-202, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 5,584 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-202ENSMUST00000112298 Adcy5P84309 1262 aa14.35□□□□□ -0.11
Ssh1-202ENSMUST00000112298 Cdca8Q8BHX3 289 aa14.35□□□□□ -0.11
Ssh1-202ENSMUST00000112298 Nop53Q8BK35 484 aaKnown RBP14.35□□□□□ -0.11
Ssh1-202ENSMUST00000112298 Mrpl44Q9CY73 333 aaKnown RBP14.35□□□□□ -0.11
Ssh1-202ENSMUST00000112298 Rfx7F8VPJ6 1459 aa14.35□□□□□ -0.11
Ssh1-202ENSMUST00000112298 Atf7Q8R0S1 413 aa14.35□□□□□ -0.11
Ssh1-202ENSMUST00000112298 Ttc5Q99LG4 440 aa14.34□□□□□ -0.11
Ssh1-202ENSMUST00000112298 Homer1Q9Z2Y3 366 aa14.34□□□□□ -0.11
Ssh1-202ENSMUST00000112298 EappQ5BU09 281 aa14.34□□□□□ -0.11
Ssh1-202ENSMUST00000112298 Cacna2d4Q5RJF7 1116 aa14.34□□□□□ -0.11
Ssh1-202ENSMUST00000112298 ClasrpQ8CFC7 668 aa14.34□□□□□ -0.11
Ssh1-202ENSMUST00000112298 Bag4Q8CI61 457 aa14.34□□□□□ -0.11
Ssh1-202ENSMUST00000112298 Gigyf1Q99MR1 1044 aaKnown RBP14.34□□□□□ -0.11
Ssh1-202ENSMUST00000112298 Kdm3aQ6PCM1 1323 aa14.34□□□□□ -0.11
Ssh1-202ENSMUST00000112298 Nucb2P81117 420 aa14.34□□□□□ -0.11
Ssh1-202ENSMUST00000112298 Bloc1s2Q9CWG9 143 aa14.34□□□□□ -0.11
Ssh1-202ENSMUST00000112298 Terf2O35144 541 aa14.34□□□□□ -0.11
Ssh1-202ENSMUST00000112298 Sh3d21Q7TSG5 549 aa14.34□□□□□ -0.11
Ssh1-202ENSMUST00000112298 4931400O07RikQ9D4M5 137 aa14.34□□□□□ -0.11
Ssh1-202ENSMUST00000112298 Tubb4aQ9D6F9 444 aa14.34□□□□□ -0.11
Ssh1-202ENSMUST00000112298 Sdc2P43407 202 aa14.33□□□□□ -0.11
Ssh1-202ENSMUST00000112298 Nfxl1E9Q8I7 918 aaKnown RBP14.33□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Cep120Q7TSG1 988 aa14.33□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Krt23Q99PS0 422 aa14.33□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Ttc21bQ0HA38 1315 aa14.33□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Ctr9Q62018 1173 aaKnown RBP14.33□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Ktn1Q61595 1327 aaKnown RBP14.33□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Polr3dQ91WD1 398 aa14.33□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Nf2P46662 596 aa14.33□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Spg7Q3ULF4 781 aa14.33□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Fez2Q6TYB5 348 aa14.33□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Rai14Q9EP71 979 aaKnown RBP14.33□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Q3UJC8 639 aa14.32□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Tbc1d9Q3UYK3 1264 aa14.32□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Als2cr12Q8BVM7 383 aa14.32□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Hs2st1Q8R3H7 356 aa14.32□□□□□ -0.12
Ssh1-202ENSMUST00000112298 AqrQ8CFQ3 1481 aaKnown RBP14.32□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Cnga2Q62398 664 aa14.32□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Kiaa1524Q8BWY9 907 aa14.32□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Skor1Q8BX46 964 aa14.32□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Baiap2l1Q9DBJ3 514 aa14.32□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Sil1Q9EPK6 465 aa14.32□□□□□ -0.12
Ssh1-202ENSMUST00000112298 A2mQ6GQT1 1474 aa14.32□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Zfp42P22227 288 aa14.32□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Znf653Q6YND2 615 aa14.32□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Acbd3Q8BMP6 525 aa14.32□□□□□ -0.12
Ssh1-202ENSMUST00000112298 PaskQ8CEE6 1383 aa14.32□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Rasa1E9PYG6 1038 aa14.32□□□□□ -0.12
Ssh1-202ENSMUST00000112298 EvcP57680 1005 aa14.32□□□□□ -0.12
Ssh1-202ENSMUST00000112298 SfswapQ3USH5 945 aaKnown RBP14.32□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Cep135Q6P5D4 1140 aa14.32□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Iffo1Q8BXL9 562 aa14.32□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Gle1Q8R322 699 aa14.32□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Pde1cQ64338 706 aa14.31□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Zmym3Q9JLM4 1370 aa14.31□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Irf9Q61179 399 aa14.31□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Ccdc66Q6NS45 935 aa14.31□□□□□ -0.12
Ssh1-202ENSMUST00000112298 LlphQ9D945 130 aaKnown RBP14.31□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Q3UPC7 1272 aa14.31□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Kdm4aQ8BW72 1064 aa14.31□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Gnat3Q3V3I2 354 aa14.31□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Ankrd44B2RXR6 993 aa14.31□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Cers3Q1A3B0 383 aa14.31□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Sass6Q80UK7 654 aa14.31□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Bcar3Q9QZK2 820 aa14.31□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Caskin1Q6P9K8 1431 aa14.3□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Pde4dQ01063 747 aa14.3□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Vps36Q91XD6 386 aa14.3□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Trap1aP19473 224 aa14.3□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Jmjd4Q8BFT6 427 aa14.3□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Brd3Q8K2F0 726 aaKnown RBP14.3□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Igf1rQ60751 1373 aa14.3□□□□□ -0.12
Ssh1-202ENSMUST00000112298 NexmifQ5DTT1 1515 aa14.3□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Wdr63B2RY71 923 aa14.3□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Mmel1Q9JLI3 765 aa14.3□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Gm44503E9PYU5 387 aa14.3□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Uchl5Q9WUP7 329 aa14.3□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Tbc1d32Q3URV1 1296 aa14.29□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Slc5a1Q8C3K6 665 aa14.29□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Srgap1Q91Z69 1062 aa14.29□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Ctnnbl1Q9CWL8 563 aaKnown RBP14.29□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Mug1P28665 1476 aa14.29□□□□□ -0.12
Ssh1-202ENSMUST00000112298 MycnP03966 462 aaKnown RBP14.29□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Stat1P42225 749 aa14.29□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Zbtb22Q9Z0G7 638 aa14.29□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Nphp3Q7TNH6 1325 aa14.29□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Ncoa1P70365 1447 aa14.29□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Gbp8Q2V6D6 525 aa14.29□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Fam50bQ9WTJ8 334 aa14.29□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Kank1E9Q238 1360 aa14.28□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Ttc21aQ8C0S4 1314 aa14.28□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Hsf2bpQ9D4G2 338 aa14.28□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Gbp1Q01514 589 aa14.28□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Soga3Q6NZL0 945 aa14.28□□□□□ -0.12
Ssh1-202ENSMUST00000112298 TchhA0A0B4J1F9 1599 aa14.28□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Dapk3O54784 448 aa14.28□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Ano2Q8CFW1 1002 aa14.28□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Cct2P80314 535 aaKnown RBP14.28□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Ctnna2Q61301 953 aa14.28□□□□□ -0.12
Ssh1-202ENSMUST00000112298 Ltv1Q6NSQ7 470 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 41.2 ms